Mycobacterium phage Phabba
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Detailed Information for Phage Phabba
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByBecca Wagner and Evan Bunnage
Year Found2014
Location FoundSpokane, WA United States of America
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates47.667702 N, 117.402889 W Map
Discovery Notes- Soil from base of tree
- Wet soil with no grass or plant growth
- Collected 10:42 am 9/3/14
- Rained 1 hr prior to sample collection
- Air temp 11.11 degrees C
- Foot traffic travels over this area
- .997 grams of sample collected
Naming NotesInspired by Jabba the Hutt from Star Wars
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 18, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage438
Genome length (bp)164254
Character of genome endsCircularly Permuted
GC Content65.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC2
Other Cluster Members

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Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

TinyC (None)

Trilla23 (None)

Turret (None)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Breeniome (C1)

Bxz1 (C1)

Cali (C1)

Catera (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Delilah (C1)

Derek (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

FoxtrotP1 (C1)

FrayBell (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

HarrySpotter (C1)

HyRo (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LRRHood (C1)

Lukilu (C1)

Lysocool (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Napoleon13 (C1)

Nappy (C1)

Nicolasphaqe (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rizal (C1)

Roots515 (C1)

SandySandal (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Tyke (C1)

Wally (C1)

Willis (C1)

Yucca (C1)

Zeenon (C1)

ZygoTaiga (C1)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

Plaque Notes- Small plaques (.2-.8mm)
- Turbid plaque
- Round
MorphotypeMyoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

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Phabba_1

Phabba_2
(RF-1 peptide chain release factor)

Phabba_3
(nucleotidyltransferase)

Phabba_4

Phabba_5

Phabba_6

Phabba_7

Phabba_8

Phabba_9

Phabba_10

Phabba_11

Phabba_12

Phabba_13

Phabba_14

Phabba_15

Phabba_16

Phabba_17

Phabba_18

Phabba_19

Phabba_20

Phabba_21

Phabba_22

Phabba_23

Phabba_24

Phabba_25

Phabba_26

Phabba_27

Phabba_28

Phabba_29

Phabba_30

Phabba_31

Phabba_32
(tRNA nucleotidyltransferase)

Phabba_33

Phabba_34

Phabba_35

Phabba_36
(esterase)

Phabba_37

Phabba_38

Phabba_39

Phabba_40

Phabba_41
(peptidyl tRNA hydrolase)

Phabba_42

Phabba_43

Phabba_44

Phabba_45

Phabba_46

Phabba_47

Phabba_48

Phabba_49

Phabba_50

Phabba_51

Phabba_52

Phabba_53
(HNH endonuclease)

Phabba_54

Phabba_55

Phabba_56

Phabba_57

Phabba_58

Phabba_59

Phabba_60

Phabba_61

Phabba_62

Phabba_63

Phabba_64

Phabba_65

Phabba_66

Phabba_67

Phabba_68

Phabba_69

Phabba_70
(helix-turn-helix DNA binding domain protein)

Phabba_71

Phabba_72

Phabba_73

Phabba_74

Phabba_75

Phabba_76

Phabba_77

Phabba_78

Phabba_79

Phabba_80

Phabba_81

Phabba_82

Phabba_83
(glutaredoxin)

Phabba_84

Phabba_89
(peptidyl tRNA hydrolase)

Phabba_92

Phabba_93

Phabba_94
(portal protein)

Phabba_95

Phabba_96

Phabba_97
(thymidylate synthase)

Phabba_98

Phabba_99
(RNA ligase)

Phabba_100

Phabba_101
(LysM-like endolysin)

Phabba_102

Phabba_103

Phabba_104
(major capsid protein)

Phabba_105

Phabba_106

Phabba_107

Phabba_108

Phabba_109

Phabba_110

Phabba_111

Phabba_112

Phabba_113

Phabba_114
(capsid decoration protein)

Phabba_115

Phabba_116

Phabba_117

Phabba_118

Phabba_119

Phabba_120

Phabba_121

Phabba_122

Phabba_123

Phabba_124

Phabba_125

Phabba_126

Phabba_127
(tail sheath protein)

Phabba_128

Phabba_129

Phabba_130

Phabba_131
(tail assembly chaperone)

Phabba_132
(tail assembly chaperone)

Phabba_133
(tape measure protein)

Phabba_134

Phabba_135

Phabba_136

Phabba_137
(minor tail protein)

Phabba_138

Phabba_139

Phabba_140
(baseplate wedge protein)

Phabba_141
(baseplate J protein)

Phabba_142

Phabba_143
(minor tail protein)

Phabba_144

Phabba_145

Phabba_146

Phabba_147

Phabba_148

Phabba_149

Phabba_150

Phabba_166
(HNH endonuclease)

Phabba_181

Phabba_183

Phabba_184
(antirepressor)

Phabba_185

Phabba_186
(DNA helicase)

Phabba_187

Phabba_188

Phabba_189

Phabba_190

Phabba_191

Phabba_192

Phabba_193
(aminotransferase)

Phabba_194

Phabba_195

Phabba_196
(helicase loader)

Phabba_197
(dsDNA helicase)

Phabba_198

Phabba_199
(DNA primase)

Phabba_200

Phabba_201
(DnaJ-like chaperonin)

Phabba_202

Phabba_203

Phabba_204
(DNA recombinase)

Phabba_205

Phabba_206

Phabba_207
(exonuclease)

Phabba_208

Phabba_209

Phabba_210

Phabba_211

Phabba_212

Phabba_213

Phabba_214

Phabba_215

Phabba_216

Phabba_217
(membrane protein)

Phabba_218

Phabba_221

Phabba_222

Phabba_223

Phabba_224

Phabba_225

Phabba_226
(membrane protein)

Phabba_227

Phabba_228

Phabba_229

Phabba_230

Phabba_231

Phabba_232
(membrane protein)

Phabba_233

Phabba_234
(membrane protein)

Phabba_235

Phabba_236

Phabba_237
(RNA binding protein)

Phabba_238

Phabba_239

Phabba_240
(protease)

Phabba_241

Phabba_242

Phabba_243

Phabba_244
(glycosyltransferase)

Phabba_245
(galactosyltransferase)

Phabba_246

Phabba_247

Phabba_248
(glycosyltransferase)

Phabba_249
(capsid decoration protein)

Phabba_250

Phabba_251

Phabba_252

Phabba_253
(lysin A)

Phabba_254
(hydrolase)

Phabba_255
(membrane protein)

Phabba_256
(terminase)

Phabba_257

Phabba_258
(helix-turn-helix DNA binding domain protein)

Phabba_259

Phabba_260

Phabba_261

Phabba_262

Phabba_263

Phabba_264
(metallophosphoesterase)

Phabba_265
(ribonucleotide reductase)

Phabba_266

Phabba_267
(polynucleotide kinase)

Phabba_268

Phabba_269

Phabba_270
(membrane protein)

Phabba_271

Phabba_272
(AAA ATPase)

Phabba_273
(nicotinate ribosyltransferase)

Phabba_274
(membrane protein)

Phabba_275
(membrane protein)

Phabba_276

Phabba_277

Phabba_278

Phabba_279

Phabba_280

Phabba_281

Phabba_282

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF668280
Refseq NumberNone yet
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload