Propionibacterium phage Pirate
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Detailed Information for Phage Pirate
Discovery Information
Isolation HostPropionibacterium acnes ATCC 6919
Found ByYu Tang Mei
Year Found2013
Location FoundLos Angeles, CA United States
Finding InstitutionUniversity of California, Los Angeles
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature37°C
GPS Coordinates34.4 N, 118.27 W Map
Discovery NotesIsolated from nasal microcomedones.

Phage isolation and genome annotation performed by Eleanor Chang, Laurel Clare, Yu Tang Mei, Cinay Murguia, and Kevin Tran (UCLA). DNA preparation prepared by Krisanavane Reddi (UCLA). Assembly performed by Will Villella (UCLA) and confirmed by Charles Bowman (University of Pittsburgh). Quality control of annotation results performed by Jordan Moberg Parker and Dallas Mould (UCLA)
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 24, 2014
Sequencing FacilityThe UCLA Genotyping and Sequencing Core
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage246
Genome length (bp)29324
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTCGTACGGCTT
GC Content54.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBU
Subcluster--
Other Cluster Members
Plaque Notesclear plaques;
ranging 3-5 mm in diameter
MorphotypeSiphoviridae
Final annotation complete?No
Number of Genes44
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKR337653
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload