Rhodococcus phage RER2
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Detailed Information for Phage RER2
Discovery Information
Isolation HostRhodococcus erythropolis Rery29
Verified to infectRhodococcus globerulus Rglo35
Found BySteve Petrovski, Robert J. Seviour, Daniel Tillett
Year Found2012
Location FoundNambour, Australia
ProgramUnavailable
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates26.622190 S, 153.041968 E Map
Discovery NotesIsolated from a wastewater treatment plant.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 6, 2012
Sequencing FacilityThe UCLA Genotyping and Sequencing Core
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage60
Genome length (bp)46596
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCCGTGAT
End Determination NotesAssumed from close sequence similarity to phages with known ends.
GC Content58.6%
Sequencing NotesThe fasta file on this site differs from the one in GenBank (as of May 2015). This is because the fasta file on this site was cut at the genome's physical end rather than the chosen site by the initial GenBank authors.
Fasta file available?Yes: Download fasta file
Characterization
ClusterCA
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJN116827
Refseq NumberNC_016653
Archiving Info
Archiving status Not in Pitt Archives