| Detailed Information for Phage Rana |
| Discovery Information |
| Isolation Host | Streptomyces griseus ATCC 10137 |
| Found By | Swapan Bhuiyan |
| Year Found | 2015 |
| Location Found | Spurger, TX USA |
| Finding Institution | University of North Texas |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 30.79998 N, 94.213428 W Map |
| Discovery Notes | The soil was collected while on a hike. The soil was very wet and muddy. The air temperature was 91°F and very humid.
Phages was isolated on Lauria media. |
| Naming Notes | Phage is named after my brother. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 7, 2017 |
| Sequencing Facility | University of North Texas |
| Shotgun Sequencing Method | Illumina Sequencing |
| Genome length (bp) | 50980 |
| Character of genome ends | Unknown |
| Overhang Length | 11 bases |
| Overhang Sequence | CGGCCAGTCAT |
| GC Content | 65.8% |
| Sequencing Notes | There was one SNP in the reads for this genome. At position 16105, ~48% of reads had a C instead of the called T. |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | BD |
| Subcluster | BD1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of North Texas |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques were medium size and round. |
| Morphotype | Siphoviridae |
| Number of Genes | 76 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH171093 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
4.0 x 10^8 pfu/mL |
| Pitt Freezer Box# |
20 |
| Pitt Freezer Box Grid# |
F3 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
