Mycobacterium phage Redi
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Detailed Information for Phage Redi
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByKathleen Hafer
Year Found2009
Location FoundSt. Louis, MO USA
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates38.669694 N, 90.383833 W Map
Discovery NotesSuburban yard in Olivette Missouri. Suburban backyard bark much pile. Soil depth 2-3cm. Temperature 70 degrees Celsius.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 28, 2011
Genome length (bp)42594
Character of genome ends3' Sticky Overhang
Overhang Length13 bases
Overhang SequenceCCCGCCGCCTTGG
GC Content66.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterN
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
Plaque Notes1.5mm/ clear middle with blurry edges/ Incubation 48 hours at 37 degrees Celsius.
MorphotypeSiphoviridae
Number of Genes69
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJN624851
Refseq NumberNC_023730
Published in PaperHatfull et al 2012, Journal of Virology: Complete genome sequences of 138 mycobacteriophages
Archiving Info
Archiving status Archived
SEA Designator 2009WUSLrediSE
SEA Lysate Titer 8.2e10
Pitt Freezer Box# 10
Pitt Freezer Box Grid# 13
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload