Mycobacterium phage Ryadel
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Detailed Information for Phage Ryadel
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByTravis Miller
Year Found2017
Location FoundStephenville, TX Erath
Finding InstitutionTarleton State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature33°C
GPS Coordinates32.278778 N, 98.147806 W Map
Discovery NotesFound ~2" in clay/sandy soil underneath rotten hay bail.
Naming NotesA combination of the names of my two children, Ry and Adel.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 10, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Genome length (bp)72658
Character of genome endsUnknown
Overhang Length4 bases
Overhang SequenceGTGT
GC Content65.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterO
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Ryadel_1

Ryadel_2

Ryadel_3

Ryadel_4

Ryadel_5

Ryadel_6

Ryadel_7
(DNA methylase)

Ryadel_8
(DNA methylase)

Ryadel_9

Ryadel_10

Ryadel_11

Ryadel_12
(endonuclease VII)

Ryadel_13

Ryadel_14

Ryadel_15

Ryadel_16

Ryadel_17

Ryadel_18

Ryadel_19

Ryadel_20

Ryadel_21

Ryadel_22
(DNA primase/polymerase)

Ryadel_23

Ryadel_24

Ryadel_25

Ryadel_26
(WhiB family transcription factor)

Ryadel_27

Ryadel_28

Ryadel_29

Ryadel_30
(HNH endonuclease)

Ryadel_31

Ryadel_32

Ryadel_33
(terminase)

Ryadel_34
(HNH endonuclease)

Ryadel_35
(portal protein)

Ryadel_36
(O-methyltransferase)

Ryadel_37

Ryadel_38
(glycosyltransferase)

Ryadel_39
(glycosyltransferase)

Ryadel_40
(capsid maturation protease)

Ryadel_41

Ryadel_42

Ryadel_43
(major capsid protein)

Ryadel_44

Ryadel_45

Ryadel_46

Ryadel_47

Ryadel_48

Ryadel_49

Ryadel_50

Ryadel_51
(major tail protein)

Ryadel_52

Ryadel_53

Ryadel_54

Ryadel_55
(helix-turn-helix DNA binding domain protein)

Ryadel_56
(tail assembly chaperone)

Ryadel_57
(tail assembly chaperone)

Ryadel_58
(tape measure protein)

Ryadel_59
(minor tail protein)

Ryadel_60
(minor tail protein)

Ryadel_61
(minor tail protein)

Ryadel_62
(minor tail protein)

Ryadel_63
(D-ala-D-ala-carboxypeptidase)

Ryadel_64
(minor tail protein)

Ryadel_65

Ryadel_66

Ryadel_67

Ryadel_68

Ryadel_69

Ryadel_70
(lysin A)

Ryadel_71
(lysin B)

Ryadel_72
(holin)

Ryadel_73

Ryadel_74

Ryadel_75

Ryadel_76

Ryadel_77
(helix-turn-helix DNA binding protein)

Ryadel_78

Ryadel_79

Ryadel_80

Ryadel_81

Ryadel_82

Ryadel_83

Ryadel_84
(DNA polymerase III sliding clamp beta)

Ryadel_85

Ryadel_86

Ryadel_87

Ryadel_88

Ryadel_89

Ryadel_90

Ryadel_91
(Ku-like dsDNA break-binding protein)

Ryadel_92

Ryadel_93

Ryadel_94
(ParB-like dsDNA partitioning protein)

Ryadel_95

Ryadel_96

Ryadel_97

Ryadel_98

Ryadel_99
(AAA-ATPase)

Ryadel_100

Ryadel_101

Ryadel_102

Ryadel_103

Ryadel_104

Ryadel_105

Ryadel_106

Ryadel_107

Ryadel_108

Ryadel_109

Ryadel_110

Ryadel_111
(helix-turn-helix DNA binding domain protein)

Ryadel_112

Ryadel_113

Ryadel_114

Ryadel_115

Ryadel_116

Ryadel_117

Ryadel_118

Ryadel_119

Ryadel_120

Ryadel_121

Ryadel_122

Ryadel_123

Ryadel_124

Ryadel_125

Ryadel_126

Ryadel_127

Ryadel_128

Ryadel_129

Ryadel_130

Ryadel_131

Ryadel_132

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH590592
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 49
Pitt Freezer Box Grid# B8
Available Files
Plaque PictureDownload
Virtual Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload