Detailed Information for Phage Sashimi |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Melaudie Palazo, Krista Mananquil |
Year Found | 2023 |
Location Found | Spokane, WA USA |
Finding Institution | Gonzaga University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 22°C |
GPS Coordinates | 47.668672 N, 117.404377 W Map |
Discovery Notes | The sample was found in front of Robinson House next to bushes on Gonzaga's campus. It was a rainy and cloudy day which made the soil nice and moist. |
Naming Notes | Sashimi comes from our favorite Japanese delicacy, sushi. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 16, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 908 |
Genome length (bp) | 52200 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGGTGA |
GC Content | 63.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AY |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Gonzaga University |
Annotation Status | Being Annotated (Expected completion by 7/1/2024) |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
EM Picture | Download |