Streptomyces phage Scap1
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Detailed Information for Phage Scap1
Discovery Information
Isolation HostStreptomyces scabiei RL-34
Found BySteven Caruso
Year Found2016
Location FoundKottayam, India
Finding InstitutionUniversity of Maryland, Baltimore County
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature28°C
GPS Coordinates9.58 N, 76.52 E Map
Discovery NotesIsolated from a donated soil sample collected in Kottayam, India on 3/20/16.
Naming NotesScap1, because this will be, we believe, the first sequenced S. scabiei phage.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 13, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3354
Genome length (bp)43060
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGCCCT
GC Content60.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBI
SubclusterBI2
Other Cluster Members
Plaque NotesApproximately 1 mm when grown on S. scabiei 36 - 48 hours in NB at 28 deg. C.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
Virtual Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload