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Mycobacterium phage Sebata
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Detailed Information for Phage Sebata
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMantha Makume
Year Found2008
Location FoundKwazulu-Natal, South Africa
Finding InstitutionUniversity of Kwazulu-Natal
ProgramUnavailable
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates28.2198 S, 31.9519 E Map
Discovery NotesFound in the Zimbali Game Reserve.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 1, 2011
Sequencing FacilityPittsburgh Bacteriophage Institute
Genome length (bp)155286
Character of genome endsCircularly Permuted
GC Content64.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Other Cluster Members

Click to View

Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

TinyC (None)

Trilla23 (None)

Turret (None)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Breeniome (C1)

Bxz1 (C1)

Cali (C1)

Catera (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Delilah (C1)

Derek (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

FoxtrotP1 (C1)

FrayBell (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

HarrySpotter (C1)

HyRo (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LRRHood (C1)

Lukilu (C1)

Lysocool (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Napoleon13 (C1)

Nappy (C1)

Nicolasphaqe (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phox (C1)

Pier (C1)

Pio (C1)

Pleione (C1)

QBert (C1)

Rizal (C1)

Roots515 (C1)

SandySandal (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Tyke (C1)

Wally (C1)

Willis (C1)

Yucca (C1)

Zeenon (C1)

ZygoTaiga (C1)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

Plaque NotesPinpoint plaques under normal conditions.
MorphotypeMyoviridae
Final annotation complete?Yes
Number of Genes230
Number of tRNAs35
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Sebata_1

Sebata_2

Sebata_3
(NrdC)

Sebata_4

Sebata_5

Sebata_6

Sebata_7

Sebata_8

Sebata_9

Sebata_10

Sebata_11

Sebata_12

Sebata_13

Sebata_14

Sebata_15

Sebata_16

Sebata_17

Sebata_18

Sebata_19

Sebata_20

Sebata_21

Sebata_22

Sebata_23

Sebata_24

Sebata_25

Sebata_26

Sebata_27

Sebata_28

Sebata_29
(Ala/Val-rich)

Sebata_30

Sebata_31

Sebata_32

Sebata_33

Sebata_34

Sebata_35

Sebata_36

Sebata_37

Sebata_38

Sebata_39

Sebata_40

Sebata_41

Sebata_42

Sebata_43

Sebata_44

Sebata_45

Sebata_46

Sebata_47

Sebata_48

Sebata_49

Sebata_50

Sebata_51

Sebata_52

Sebata_53

Sebata_54

Sebata_55

Sebata_56

Sebata_57

Sebata_58

Sebata_59

Sebata_60

Sebata_61

Sebata_62

Sebata_63

Sebata_64

Sebata_65
(HNH/DNA binding domain)

Sebata_66

Sebata_67

Sebata_68

Sebata_69

Sebata_70

Sebata_71

Sebata_72

Sebata_73

Sebata_74

Sebata_75

Sebata_76

Sebata_77

Sebata_78
(L13e family)

Sebata_79

Sebata_80
(Tat)

Sebata_81

Sebata_82

Sebata_83
(ParBc domain)

Sebata_89

Sebata_90

Sebata_91

Sebata_92

Sebata_93

Sebata_94
(ThyX)

Sebata_95

Sebata_96

Sebata_97

Sebata_98
(LysM domain)

Sebata_99
(LysM domain)

Sebata_100

Sebata_101

Sebata_102

Sebata_103

Sebata_104

Sebata_105

Sebata_106

Sebata_107

Sebata_108

Sebata_109

Sebata_110

Sebata_111

Sebata_112

Sebata_113

Sebata_114

Sebata_115

Sebata_116

Sebata_117

Sebata_118

Sebata_119

Sebata_120

Sebata_121

Sebata_122

Sebata_123

Sebata_124

Sebata_125

Sebata_126

Sebata_127

Sebata_128

Sebata_129

Sebata_130
(tail assembly chaperone)

Sebata_131
(tail assembly chaperone)

Sebata_132
(tapemeasure)

Sebata_133

Sebata_134

Sebata_135

Sebata_136
(NLP/P60-family domain)

Sebata_137

Sebata_138
(Gly-Rich)

Sebata_139

Sebata_140
(baseplate J)

Sebata_141

Sebata_142

Sebata_143

Sebata_144

Sebata_145

Sebata_146

Sebata_147

Sebata_148

Sebata_149

Sebata_150

Sebata_151

Sebata_152

Sebata_153

Sebata_157

Sebata_158
(peptidyl-tRNA-hydrolase)

Sebata_172

Sebata_174

Sebata_175

Sebata_188

Sebata_189
(helicase)

Sebata_190

Sebata_191

Sebata_192

Sebata_193

Sebata_194

Sebata_195

Sebata_196

Sebata_197

Sebata_198

Sebata_199

Sebata_200

Sebata_201
(ArgD)

Sebata_202

Sebata_203
(DnaC)

Sebata_204
(DnaB-like helicase)

Sebata_205

Sebata_206
(primase)

Sebata_207

Sebata_208
(J domain)

Sebata_209

Sebata_210
(Pol III alpha)

Sebata_211
(putative RF1)

Sebata_212
(RecA)

Sebata_213

Sebata_214

Sebata_215

Sebata_216
(RusA)

Sebata_217

Sebata_218

Sebata_219

Sebata_220

Sebata_221

Sebata_222

Sebata_223

Sebata_224

Sebata_227

Sebata_228

Sebata_229

Sebata_230

Sebata_231

Sebata_232

Sebata_233

Sebata_234

Sebata_235
(Ro)

Sebata_236

Sebata_237

Sebata_238

Sebata_239

Sebata_240

Sebata_241
(glycosyl transferase)

Sebata_242

Sebata_243

Sebata_244

Sebata_245

Sebata_246

Sebata_247

Sebata_248

Sebata_249

Sebata_250
(LysA)

Sebata_251

Sebata_252
(LysB)

Sebata_253

Sebata_254

Sebata_255

Sebata_256

Sebata_257

Sebata_258
(Pnk)

Sebata_259

Sebata_260
(Ser/Thr kinase)

Sebata_261

Sebata_262

Sebata_263
(PurA)

Sebata_264

Sebata_265

Sebata_266

Sebata_267
(coding region disrupted due to circularly permuted genome)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJN204348
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
Virtual Digest PictureDownload
EM PictureDownload