Arthrobacter phage Shrooms
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Detailed Information for Phage Shrooms
Discovery Information
Isolation HostArthrobacter sp. ATCC 21022
Found ByHugh Mair
Year Found2016
Location FoundAquilla, TX USA
Finding InstitutionBaylor University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates31.818882 N, 97.276925 W Map
Discovery NotesThe soil was relatively dry soil harvested from near the surface under a mushroom. The soil was 45% sand, 30% silt, and 25% clay and appeared as a rich dark brown. The water content of the soil was 15.07%.
Naming NotesThe name of this phage is based on the proximity of the soil to a mushroom.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 4, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1637
Genome length (bp)59707
Character of genome endsCircularly Permuted
GC Content64.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAL
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesSmall (~.4-.6mm), lytic plaques; enrichment finely webbed the plates, appearing as a mesh at 2ml.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Shrooms_1

Shrooms_2
(ParB-like nuclease domain protein)

Shrooms_3

Shrooms_4

Shrooms_5
(ParB-like nuclease domain protein)

Shrooms_6
(PAPs reductase)

Shrooms_7
(ParB-like domain protein)

Shrooms_8
(methyltransferase)

Shrooms_9
(HTH DNA binding domain protein)

Shrooms_10
(terminase large subunit)

Shrooms_11

Shrooms_12

Shrooms_13

Shrooms_14
(ssDNA binding protein)

Shrooms_15

Shrooms_16
(portal protein)

Shrooms_17
(capsid maturation protease)

Shrooms_18
(aldolase class I)

Shrooms_19

Shrooms_20

Shrooms_21

Shrooms_22
(RNase)

Shrooms_23

Shrooms_24

Shrooms_25
(major capsid protein)

Shrooms_26

Shrooms_27

Shrooms_28
(head-to-tail stopper)

Shrooms_29

Shrooms_30

Shrooms_31

Shrooms_32

Shrooms_33

Shrooms_34

Shrooms_35

Shrooms_36

Shrooms_37

Shrooms_38

Shrooms_39

Shrooms_40

Shrooms_41

Shrooms_42

Shrooms_43

Shrooms_44

Shrooms_45

Shrooms_46

Shrooms_47

Shrooms_48

Shrooms_49

Shrooms_50

Shrooms_51
(HTH DNA binding domain protein)

Shrooms_52

Shrooms_53

Shrooms_54

Shrooms_55

Shrooms_56

Shrooms_57

Shrooms_58
(HTH DNA binding protein)

Shrooms_59

Shrooms_60

Shrooms_61

Shrooms_62
(major tail protein)

Shrooms_63

Shrooms_64
(tail assembly chaperone)

Shrooms_65
(tape measure protein)

Shrooms_66
(minor tail protein)

Shrooms_67
(minor tail protein)

Shrooms_68

Shrooms_69

Shrooms_70

Shrooms_71

Shrooms_72

Shrooms_73

Shrooms_74

Shrooms_75

Shrooms_76

Shrooms_77

Shrooms_78

Shrooms_79

Shrooms_80
(tail sheath protein)

Shrooms_81
(lysin A)

Shrooms_82
(host nuclease inhibitor)

Shrooms_83
(ATPase)

Shrooms_84
(HTH DNA binding domain protein)

Shrooms_85
(HTH DNA binding domain protein)

Shrooms_86
(helix-turn-helix DNA binding domain protein)

Shrooms_87
(HTH DNA binding domain protein)

Shrooms_88

Shrooms_89
(HNH endonuclease)

Shrooms_90
(HTH DNA binding domain protein)

Shrooms_91

Shrooms_92
(exonuclease)

Shrooms_93
(DNA helicase)

Shrooms_94

Shrooms_95

Shrooms_96

Shrooms_97
(amidoligase)

Shrooms_98
(glutamine amidotransferase domain protein)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF140427
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.4x10^8
Pitt Freezer Box# 35
Pitt Freezer Box Grid# G5
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload