Rhodococcus phage Shuman
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Detailed Information for Phage Shuman
Discovery Information
Isolation HostRhodococcus erythropolis NRRL B-1574
Found ByUnavailable
Year Found2017
Location FoundNyack, NY
Finding InstitutionNyack College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 10, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1684
Genome length (bp)46544
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCCGTGAT
GC Content58.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCA
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List

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Shuman_1
(membrane protein)

Shuman_2

Shuman_3
(terminase, small subunit)

Shuman_7
(lysin A)

Shuman_8
(terminase, large subunit)

Shuman_9
(portal protein)

Shuman_10
(capsid maturation protease)

Shuman_11
(scaffolding protein)

Shuman_12
(major capsid protein)

Shuman_13

Shuman_14
(head-to-tail connector complex protein)

Shuman_15
(head-to-tail connector complex protein)

Shuman_16

Shuman_17
(head-to-tail connector complex protein)

Shuman_18
(major tail protein)

Shuman_19
(tail assembly chaperone)

Shuman_20
(tail assembly chaperone)

Shuman_21
(tape measure protein)

Shuman_22
(minor tail protein)

Shuman_23
(minor tail protein)

Shuman_24
(minor tail protein)

Shuman_25
(holin)

Shuman_26

Shuman_27
(minor tail protein)

Shuman_28

Shuman_29
(integrase, (S-int))

Shuman_30
(excise)

Shuman_31
(membrane protein)

Shuman_32
(deoxycytidylate deaminase)

Shuman_33

Shuman_34

Shuman_35

Shuman_36
(DNA polymerase I)

Shuman_37
(helix-turn-helix DNA binding domain)

Shuman_38
(ThyX thymidylate synthase)

Shuman_39

Shuman_40

Shuman_41
(ribonucleotide reductase)

Shuman_42

Shuman_43
(RNA polymerase sigma factor)

Shuman_44
(MRE11 double-strand break endo/exonuclease)

Shuman_45

Shuman_46
(NrdH glutaredoxin)

Shuman_47

Shuman_48
(DNA primase)

Shuman_49
(DNA primase)

Shuman_50

Shuman_51
(endonuclease VII)

Shuman_52

Shuman_53
(DnaB dsDNA helicase)

Shuman_54

Shuman_55
(membrane protein)

Shuman_56
(membrane protein)

Shuman_57
(RecB exonuclease)

Shuman_58

Shuman_59
(immunity repressor)

Shuman_60

Shuman_61

Shuman_62

Shuman_63

Shuman_64

Shuman_65
(antirestriction protein, ArdA-like)

Shuman_66

Shuman_67

Shuman_68

Shuman_69

Shuman_70

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH316569
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 72
Pitt Freezer Box Grid# A5
Available Files
GenBank File for PhameratorDownload