Mycobacterium phage SirHarley
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Detailed Information for Phage SirHarley
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByTori Schlensker
Year Found2007
Location FoundTriad, IL USA
Finding InstitutionTriad High School
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates38.716356 N, 89.85692 W Map
Discovery NotesHorse ("Harley") enclosure
Troy, Illinois 62294
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 11, 2011
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodSanger Sequencing
Genome length (bp)64791
Character of genome endsCircularly Permuted
GC Content59.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterD
SubclusterD1
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes89
Has been Phamerated?Yes
Gene List

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SirHarley_1

SirHarley_2

SirHarley_3

SirHarley_4

SirHarley_5

SirHarley_6
(VIP2-like toxin domain protein)

SirHarley_7
(terminase)

SirHarley_8
(portal protein)

SirHarley_9

SirHarley_10

SirHarley_11

SirHarley_12

SirHarley_13

SirHarley_14

SirHarley_15
(major capsid protein)

SirHarley_16

SirHarley_17

SirHarley_18

SirHarley_19

SirHarley_20

SirHarley_21

SirHarley_22

SirHarley_23
(major tail protein)

SirHarley_24
(tail assembly chaperone)

SirHarley_25
(tail assembly chaperone)

SirHarley_26
(tapemeasure protein)

SirHarley_27

SirHarley_28

SirHarley_29
(minor tail protein)

SirHarley_30
(minor tail protein)

SirHarley_31

SirHarley_32

SirHarley_33

SirHarley_34
(lysin A)

SirHarley_35

SirHarley_36

SirHarley_37

SirHarley_38
(lysin B)

SirHarley_39

SirHarley_40

SirHarley_41

SirHarley_42

SirHarley_43

SirHarley_44

SirHarley_45

SirHarley_46

SirHarley_47

SirHarley_48

SirHarley_49

SirHarley_50

SirHarley_51

SirHarley_52

SirHarley_53

SirHarley_54
(helicase)

SirHarley_55

SirHarley_56

SirHarley_57

SirHarley_58

SirHarley_59

SirHarley_60

SirHarley_61
(nucleotide binding protein)

SirHarley_62
(CDC45-like protein)

SirHarley_63

SirHarley_64

SirHarley_65
(deoxyribnucleotidase)

SirHarley_66
(methyltransferase)

SirHarley_67

SirHarley_68

SirHarley_69
(DNA polymerase III alpha subunit)

SirHarley_70

SirHarley_71
(ThyX)

SirHarley_72

SirHarley_73

SirHarley_74

SirHarley_75

SirHarley_76

SirHarley_77

SirHarley_78

SirHarley_79

SirHarley_80

SirHarley_81

SirHarley_82

SirHarley_83

SirHarley_84

SirHarley_85
(HNH endonuclease)

SirHarley_86

SirHarley_87

SirHarley_88

SirHarley_89

SirHarley_90
(primase/polymerase)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJF937107
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 3
Pitt Freezer Box Grid# A4
Available Files
Virtual Digest PictureDownload
EM PictureDownload