Gordonia phage Sproutie
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Detailed Information for Phage Sproutie
Discovery Information
Isolation HostGordonia terrae 3612
Found ByDesiree Paige Rose
Year Found2017
Location FoundPittsburgh, PA United States of America
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.44222 N, 79.95611 W Map
Discovery NotesThe soil sample was collected entirely in a clean plastic bag at approximately 10:30 on Monday January 23, 2017 with a temperature of 46°F. The soil was collected from a flower pot, and the soil was very moist, full of organic matter, and collected approximately 2 inches below the surface.
Naming NotesI named this phage with the help of my mother by considering the location of its origin. The soil sample was collected from a flower pot area, and plants sprout out of the ground, so Sproutie did too.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 16, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1967
Genome length (bp)46221
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTACCAGGGGGA
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ2
Other Cluster Members
Plaque NotesThe plaque formed was small,round, and clear in color.
Final annotation complete?No
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload