Gordonia phage Squiddly
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Detailed Information for Phage Squiddly
Discovery Information
Isolation HostGordonia terrae 3612
Found ByIsabella Weiler
Year Found2017
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.43 N, 79.94 W Map
Discovery NotesFound near a lake in dark, moist soil on a relatively sunny and warm day with little human/animal traffic.
Naming NotesThe name for this phage is an inside joke.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 30, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Genome length (bp)57508
Character of genome endsUnknown
Overhang Length10 bases
Overhang SequenceCTCTAGGCAT
GC Content63.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDN
SubclusterDN2
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusAwaiting_QC
Plaque NotesThe plaques are small, roughly around 2mm in diameter, and mostly clear.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 58
Pitt Freezer Box Grid# A12
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload