Streptomyces phage Squillium
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Detailed Information for Phage Squillium
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByGrace Gerbi and Laura Goh
Year Found2017
Location FoundSt. Louis, MO USA
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature22°C
GPS Coordinates38.64812 N, 90.309596 W Map
Discovery NotesSoil was moist and clumpy; collection depth was 3.5 cm; collected from a flowerbed on September 7th, 2017
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 28, 2022
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage79
Genome length (bp)132303
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length10779 bp
GC Content50.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Squillium_1

Squillium_2

Squillium_3

Squillium_4

Squillium_5

Squillium_6

Squillium_7
(Lsr2-like DNA bridging protein)

Squillium_8

Squillium_9

Squillium_10
(ParB-like nuclease domain protein)

Squillium_11

Squillium_12

Squillium_13

Squillium_14

Squillium_15

Squillium_16

Squillium_17

Squillium_18

Squillium_19

Squillium_20

Squillium_21

Squillium_22
(HNH endonuclease)

Squillium_23

Squillium_24
(ThyX-like thymidylate synthase)

Squillium_25

Squillium_26

Squillium_27
(MutT-like nucleotide pyrophosphohydrolase)

Squillium_28

Squillium_29

Squillium_30

Squillium_31

Squillium_32

Squillium_33

Squillium_34

Squillium_36
(HNH endonuclease)

Squillium_37
(glycosyltransferase)

Squillium_38

Squillium_39

Squillium_40
(glycosyltransferase)

Squillium_41
(ribonucleotide reductase)

Squillium_42
(HNH endonuclease)

Squillium_43
(endolysin)

Squillium_44

Squillium_45

Squillium_46
(portal protein)

Squillium_47

Squillium_48
(capsid maturation protease)

Squillium_49
(major capsid protein)

Squillium_50

Squillium_51
(head-to-tail adaptor)

Squillium_52
(head-to-tail stopper)

Squillium_53

Squillium_54
(tail terminator)

Squillium_55
(major tail protein)

Squillium_56
(tail assembly chaperone)

Squillium_57

Squillium_58
(tape measure protein)

Squillium_59

Squillium_60
(minor tail protein)

Squillium_61

Squillium_62
(minor tail protein)

Squillium_63
(minor tail protein)

Squillium_64

Squillium_65

Squillium_66

Squillium_67
(HNH endonuclease)

Squillium_68
(metallophosphoesterase)

Squillium_69

Squillium_70

Squillium_71

Squillium_72

Squillium_73

Squillium_74

Squillium_75
(DnaB-like dsDNA helicase)

Squillium_76

Squillium_77
(DNA primase)

Squillium_78
(ssDNA binding protein)

Squillium_79
(DnaE-like DNA polymerase III alpha)

Squillium_80

Squillium_81
(MazG-like nucleotide pyrophosphohydrolase)

Squillium_82
(RecA-like DNA recombinase)

Squillium_83

Squillium_84
(holliday junction resolvase)

Squillium_85

Squillium_86

Squillium_87
(Cas4 family exonuclease)

Squillium_88

Squillium_89
(RuvC-like resolvase)

Squillium_90
(DprA-like DNA processing chain A)

Squillium_91
(helix-turn-helix DNA binding domain protein)

Squillium_92
(methyltransferase)

Squillium_93
(thymidylate kinase)

Squillium_94

Squillium_95

Squillium_96
(terminase)

Squillium_97
(HNH endonuclease)

Squillium_98

Squillium_99

Squillium_103

Squillium_104

Squillium_107
(nucleotidyltransferase)

Squillium_108
(FtsK-like DNA translocase)

Squillium_109

Squillium_111

Squillium_112

Squillium_114

Squillium_116

Squillium_117

Squillium_118

Squillium_120

Squillium_121

Squillium_123

Squillium_124

Squillium_125
(Ro-like RNA binding protein)

Squillium_126

Squillium_127

Squillium_128

Squillium_129

Squillium_130

Squillium_131

Squillium_133

Squillium_135

Squillium_141

Squillium_142

Squillium_143

Squillium_146
(peptidase)

Squillium_147

Squillium_149

Squillium_150

Squillium_152
(band-7-like membrane protein)

Squillium_153

Squillium_154

Squillium_160

Squillium_161

Squillium_163

Squillium_164

Squillium_167

Squillium_168

Squillium_169

Squillium_173

Squillium_174

Squillium_178

Squillium_180

Squillium_181
(DnaQ-like DNA polymerase III subunit)

Squillium_182

Squillium_184

Squillium_185
(hydrolase)

Squillium_186

Squillium_187

Squillium_188
(acetyltransferase)

Squillium_189

Squillium_191

Squillium_192

Squillium_193

Squillium_194

Squillium_195
(RNA ligase)

Squillium_196

Squillium_197

Squillium_198

Squillium_199
(polynucleotide kinase)

Squillium_200

Squillium_201

Squillium_203

Squillium_204

Squillium_206

Squillium_207

Squillium_209

Squillium_211

Squillium_212

Squillium_213

Squillium_214

Squillium_215

Squillium_216

Squillium_217

Squillium_218

Squillium_219

Squillium_220
(deoxycytidylate deaminase)

Squillium_221
(rIIA-like protein)

Squillium_222
(rIIB-like protein)

Squillium_223
(phosphoesterase)

Squillium_224

Squillium_225

Squillium_226
(WhiB family transcription factor)

Squillium_227

Squillium_228

Squillium_229

Squillium_230

Squillium_231

Squillium_232

Squillium_233

Squillium_234

Squillium_236

Squillium_237

Squillium_238

Squillium_239

Squillium_240

Squillium_241

Squillium_242
(thioredoxin)

Squillium_243

Squillium_244
(glycosylase)

Squillium_245

Squillium_246

Squillium_247

Squillium_248

Squillium_249

Squillium_250

Squillium_251

Squillium_252

Squillium_253

Squillium_254

Squillium_255

Squillium_256

Squillium_257

Squillium_258

Squillium_259
(Lsr2-like DNA bridging protein)

Squillium_260

Squillium_261

Squillium_262
(ParB-like nuclease domain protein)

Squillium_263

Squillium_264

Squillium_265

Squillium_266

Squillium_267

Squillium_268

Squillium_269

Squillium_270

Squillium_271

Squillium_272

Squillium_273

Squillium_274
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON108650
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4.4*10^10
Pitt Freezer Box# 49
Pitt Freezer Box Grid# D4
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload