Gordonia phage SteveFrench
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Detailed Information for Phage SteveFrench
Discovery Information
Isolation HostGordonia terrae 3612
Found ByNicole Firkous and Megan Richards
Year Found2016
Location FoundHudson, WI United States
Finding InstitutionUniversity of Wisconsin-River Falls
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature29°C
GPS Coordinates44.971171 N, 92.75923 W Map
Discovery NotesFound along the beach of the St. Croix in Hudson, WI around 8:14pm (from I94 traveling North on 2nd Street, take a left on Buckeye Street. Location is straight ahead). Found on the bank of the river to the right of the large tree and brush about 15-20 feet away. The tide had just left so the soil was very moist and sandy. The temperature was 71F, with slightly humid and partly cloudy weather.
Naming NotesIt was named after an animal character from a TV show
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 20, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage793
Genome length (bp)75687
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length191 bp
GC Content59.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS2
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesThe plagues were very small when on the plates (less than the size of a pen dot). They were hazy with no halos.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

SteveFrench_1

SteveFrench_2

SteveFrench_3

SteveFrench_4
(DNA binding protein)

SteveFrench_5

SteveFrench_6

SteveFrench_7
(DNA primase)

SteveFrench_8

SteveFrench_9
(terminase)

SteveFrench_10
(portal protein)

SteveFrench_11
(hydrolase)

SteveFrench_12

SteveFrench_13
(capsid maturation protease)

SteveFrench_14
(scaffolding protein)

SteveFrench_15
(major capsid protein)

SteveFrench_16
(HNH endonuclease)

SteveFrench_17

SteveFrench_18

SteveFrench_19
(head-to-tail connector complex protein)

SteveFrench_20

SteveFrench_21

SteveFrench_22

SteveFrench_23
(major tail protein)

SteveFrench_25
(tail assembly chaperone)

SteveFrench_26
(tail assembly chaperone)

SteveFrench_27
(tape measure protein)

SteveFrench_28
(minor tail protein)

SteveFrench_29
(minor tail protein)

SteveFrench_30
(minor tail protein)

SteveFrench_31
(membrane protein)

SteveFrench_32
(membrane protein)

SteveFrench_33
(membrane protein)

SteveFrench_34
(lysin A, N-acetyl-beta-D-muramidase domain)

SteveFrench_35
(lysin A, peptidase domain)

SteveFrench_36
(membrane protein)

SteveFrench_37
(membrane protein)

SteveFrench_38
(membrane protein)

SteveFrench_39

SteveFrench_40
(endonuclease/helicase)

SteveFrench_41

SteveFrench_42

SteveFrench_43

SteveFrench_44

SteveFrench_45

SteveFrench_46
(DNA methylase)

SteveFrench_47

SteveFrench_48

SteveFrench_49
(lysin B)

SteveFrench_50
(nucleotide pyrophosphohydrolase)

SteveFrench_51

SteveFrench_52

SteveFrench_53
(DNA polymerase III sliding clamp (beta))

SteveFrench_54

SteveFrench_55
(exonuclease)

SteveFrench_56
(helix-turn-helix DNA binding domain protein)

SteveFrench_57

SteveFrench_58
(DNA helicase)

SteveFrench_59

SteveFrench_60
(zinc finger DNA binding protein)

SteveFrench_61

SteveFrench_62

SteveFrench_63

SteveFrench_64

SteveFrench_65

SteveFrench_66

SteveFrench_67

SteveFrench_68

SteveFrench_69

SteveFrench_70

SteveFrench_71

SteveFrench_72

SteveFrench_73

SteveFrench_74

SteveFrench_75

SteveFrench_76

SteveFrench_77

SteveFrench_78

SteveFrench_79

SteveFrench_80

SteveFrench_81

SteveFrench_82
(HNH endonuclease)

SteveFrench_83

SteveFrench_84

SteveFrench_85

SteveFrench_86

SteveFrench_87
(cobalamin biosynthesis protein)

SteveFrench_88

SteveFrench_89

SteveFrench_90

SteveFrench_91

SteveFrench_92

SteveFrench_93

SteveFrench_94

SteveFrench_95

SteveFrench_96

SteveFrench_97

SteveFrench_98

SteveFrench_99

SteveFrench_100

SteveFrench_101

SteveFrench_102

SteveFrench_103

SteveFrench_104

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMG770214
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 7.7x10^7
Date of SEA Lysate Titering Oct 10, 2016
Pitt Freezer Box# 37
Pitt Freezer Box Grid# G9
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload