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Streptomyces phage Sushi23
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Detailed Information for Phage Sushi23
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Found ByIdowu Olugbade
Year Found2015
Location FoundBethlehem , PA United States
Finding InstitutionLehigh University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Naming NotesNamed after my hamster Sushi. I had to give sushi away before going away to college, so I thought I would honor our times together by naming my phage after him and the number was added because 23 is also my favorite number.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 22, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1418
Genome length (bp)133917
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length11074 bp
GC Content50.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Other Cluster Members
Plaque NotesRound, clear plaques. Majority of plaques are 5mm in diameter, with a few that are 2mm in diameter
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes227
Number of tRNAs44
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Sushi23_1

Sushi23_2

Sushi23_3

Sushi23_4

Sushi23_5

Sushi23_6

Sushi23_7

Sushi23_8
(DNA bridging protein)

Sushi23_9

Sushi23_10

Sushi23_11

Sushi23_12

Sushi23_13

Sushi23_14

Sushi23_15

Sushi23_16

Sushi23_17

Sushi23_18

Sushi23_19

Sushi23_20

Sushi23_21

Sushi23_22

Sushi23_23

Sushi23_24
(HNH endonuclease)

Sushi23_25

Sushi23_26
(thymidylate synthase)

Sushi23_27
(LAGLIDADG endonuclease)

Sushi23_28

Sushi23_29

Sushi23_30

Sushi23_31

Sushi23_32
(DNA-binding ferratin-like protein)

Sushi23_33

Sushi23_34

Sushi23_35
(nucleotidyltransferase)

Sushi23_36
(glycosyltransferase)

Sushi23_37
(glycosyltransferase)

Sushi23_39
(HNH endonuclease)

Sushi23_40
(hydrolase)

Sushi23_41

Sushi23_42
(glycosyltransferase)

Sushi23_43
(ribonucleotide reductase)

Sushi23_44
(LysM-like endolysin)

Sushi23_45

Sushi23_46

Sushi23_47
(portal protein)

Sushi23_48

Sushi23_49
(capsid maturation protease)

Sushi23_50
(major capsid protein)

Sushi23_51

Sushi23_52

Sushi23_53

Sushi23_54

Sushi23_55

Sushi23_56

Sushi23_57

Sushi23_58

Sushi23_59
(tapemeasure protein)

Sushi23_60

Sushi23_61
(minor tail protein)

Sushi23_62

Sushi23_63

Sushi23_64
(minor tail protein)

Sushi23_65

Sushi23_66

Sushi23_67

Sushi23_68
(HNH endonuclease)

Sushi23_69
(metallophosphoesterase)

Sushi23_70

Sushi23_71

Sushi23_72

Sushi23_73

Sushi23_74

Sushi23_75

Sushi23_76
(dsDNA helicase)

Sushi23_77
(DNA primase)

Sushi23_78

Sushi23_79
(DNA polymerase III alpha)

Sushi23_80

Sushi23_81
(nucleotide pyrophosphohydrolase)

Sushi23_82
(DNA recombinase)

Sushi23_83

Sushi23_84

Sushi23_85

Sushi23_86

Sushi23_87
(exonuclease)

Sushi23_88

Sushi23_89
(RuvC-like resolvase)

Sushi23_90

Sushi23_91

Sushi23_92

Sushi23_93

Sushi23_94

Sushi23_95
(terminase large subunit)

Sushi23_96
(terminase associated HNH endonuclease)

Sushi23_97

Sushi23_101

Sushi23_102

Sushi23_105
(nucleotidyltransferase)

Sushi23_106
(FtsK-like DNA translocase)

Sushi23_107

Sushi23_109

Sushi23_110

Sushi23_112

Sushi23_113

Sushi23_114

Sushi23_115
(hydrolase)

Sushi23_116

Sushi23_118

Sushi23_119

Sushi23_121

Sushi23_122

Sushi23_123

Sushi23_124
(RNA binding protein)

Sushi23_125

Sushi23_126

Sushi23_127

Sushi23_128

Sushi23_129

Sushi23_130

Sushi23_131

Sushi23_133

Sushi23_137

Sushi23_142

Sushi23_143

Sushi23_144

Sushi23_147

Sushi23_149

Sushi23_150

Sushi23_152
(band-7-like membrane protein)

Sushi23_153

Sushi23_154

Sushi23_156

Sushi23_162

Sushi23_165

Sushi23_166

Sushi23_167

Sushi23_172

Sushi23_173

Sushi23_176
(HNH endonuclease)

Sushi23_178

Sushi23_180

Sushi23_181
(exonuclease)

Sushi23_183

Sushi23_184
(hydrolase)

Sushi23_185

Sushi23_186

Sushi23_187

Sushi23_188

Sushi23_190

Sushi23_191

Sushi23_192

Sushi23_193

Sushi23_194
(RNA ligase)

Sushi23_195

Sushi23_196

Sushi23_197
(polynucleotide kinase)

Sushi23_198

Sushi23_200

Sushi23_201

Sushi23_203

Sushi23_204

Sushi23_206

Sushi23_208

Sushi23_209

Sushi23_210

Sushi23_211

Sushi23_212

Sushi23_213

Sushi23_214

Sushi23_215

Sushi23_216

Sushi23_217
(CMP deaminase)

Sushi23_218
(rIIA-like protector protein)

Sushi23_219

Sushi23_220
(phosphoesterase)

Sushi23_221

Sushi23_222

Sushi23_223
(HNH endonuclease)

Sushi23_224

Sushi23_225

Sushi23_226

Sushi23_227

Sushi23_228

Sushi23_229

Sushi23_230

Sushi23_231

Sushi23_232

Sushi23_233

Sushi23_235

Sushi23_236

Sushi23_237

Sushi23_238

Sushi23_239

Sushi23_240

Sushi23_241
(KTSC domain protein)

Sushi23_242
(thioredoxin)

Sushi23_243

Sushi23_244

Sushi23_245

Sushi23_246

Sushi23_247

Sushi23_248

Sushi23_249

Sushi23_250

Sushi23_251

Sushi23_252

Sushi23_253

Sushi23_254

Sushi23_255

Sushi23_256

Sushi23_257

Sushi23_258
(Lsr2-like protein)

Sushi23_259

Sushi23_260

Sushi23_261

Sushi23_262

Sushi23_263

Sushi23_264

Sushi23_265

Sushi23_266

Sushi23_267

Sushi23_268

Sushi23_269

Sushi23_270

Sushi23_271

Sushi23_272

Sushi23_273

Sushi23_274
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF358542
Refseq NumberNone yet
Available Files
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload