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Gordonia phage Tangent
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Detailed Information for Phage Tangent
Discovery Information
Isolation HostGordonia terrae 3612
Found ByTanvi Shah
Year Found2017
Location FoundPittsburgh, PA United States of America
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.444221 N, 79.954441 W Map
Discovery NotesCollected January 8th, 2017
Temperature was about 10 degress Fahrenheit
Dirt was very hard, partially frozen, and chunky
Collected from the bus stop outside of the Cathedral of Learning
Naming NotesThe name for this phage comes from my high school nickname.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 16, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2425
Genome length (bp)58281
Character of genome endsCircularly Permuted
GC Content67.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
Subcluster--
Other Cluster Members
Plaque NotesClear plaques about 0.25 -0.50 mm in diameter
Blurry edges (most likely caused by lysis of cells, not directly by phage particles)
Plaques round and slightly oblong (not perfectly circular)
Plaque morphology image from a 10^-3 serial dilution
Final annotation complete?No
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload