| Detailed Information for Phage ToriToki | |
| Discovery Information | |
| Isolation Host | Streptomyces griseus ATCC 10137 |
| Found By | Paul Nguyen |
| Year Found | 2017 |
| Location Found | Denton , TX USA |
| Finding Institution | University of North Texas |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 25°C |
| GPS Coordinates | 33.202555 N, 97.13444 W Map |
| Discovery Notes | Date/Time: February 15, 2017 at 3:45 PM Temperature: 58 degrees Fahrenheit 14 degrees Celsius Soil Description: Very wet; dark brown; hardly exposed to sunlight. Sample taken after a heavy rain next to a water sewage pipe. Found soil at a creek. |
| Naming Notes | The name comes from my two dogs "Tori" and "Toki" combined. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 2, 2017 |
| Sequencing Facility | University of North Texas |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 192 |
| Genome length (bp) | 46077 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 264 bp |
| GC Content | 59.7% |
| Sequencing Notes | At position 21524, about 43% of the reads had an "A" instead of the published "G". |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BF |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Lysogeny Notes | Results yielded plaque formation, but there was slimy regrowth on the plaques (possible signs of contamination). Plaques formed all the way to the 10^-4 dilutions. |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Morphotype | Podoviridae |
| Number of Genes | 64 |
| Number of tRNAs | 22 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewToriToki_1 ToriToki_2 ToriToki_3 ToriToki_4 ToriToki_5 ToriToki_6 ToriToki_7 ToriToki_8 ToriToki_9 ToriToki_10 ToriToki_11 ToriToki_12 ToriToki_13 ToriToki_36 ToriToki_37 ToriToki_38 ToriToki_39 ToriToki_40 ToriToki_41 ToriToki_42 ToriToki_43 ToriToki_44 ToriToki_45 ToriToki_46 ToriToki_47 ToriToki_48 ToriToki_49 ToriToki_50 ToriToki_51 ToriToki_52 ToriToki_53 ToriToki_54 ToriToki_55 ToriToki_56 ToriToki_57 ToriToki_58 ToriToki_59 ToriToki_60 ToriToki_61 ToriToki_62 ToriToki_63 ToriToki_64 ToriToki_65 ToriToki_66 ToriToki_67 ToriToki_68 ToriToki_69 ToriToki_70 ToriToki_71 ToriToki_72 ToriToki_73 ToriToki_74 ToriToki_75 ToriToki_76 ToriToki_77 ToriToki_78 ToriToki_79 ToriToki_80 ToriToki_81 ToriToki_82 ToriToki_83 ToriToki_84 ToriToki_85 ToriToki_86 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MG663585 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 1.4 x 10^8 |
| Date of SEA Lysate Titering | Apr 5, 2017 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
