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Gordonia phage UmaThurman
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Detailed Information for Phage UmaThurman
Discovery Information
Isolation HostGordonia terrae 3612
Found ByCharles Willis
Year Found2015
Location FoundPittsburgh, PA U.S.
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.440746 N, 79.953925 W Map
Naming NotesJimi hendrix rules
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 12, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1434
Genome length (bp)50127
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCTCCGGTGA
GC Content67.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Other Cluster Members
Plaque NotesSmall circular plaques
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes83
Has been Phamerated?Yes
Gene List

Click to View

UmaThurman_1
(terminase, small subunit)

UmaThurman_2
(terminase, large subunit)

UmaThurman_3
(portal protein)

UmaThurman_4
(capsid maturation protease)

UmaThurman_5
(scaffolding protein)

UmaThurman_6
(major capsid protein)

UmaThurman_7
(head-to-tail connector protein)

UmaThurman_8
(head-to-tail connector protein)

UmaThurman_9
(head-to-tail connector protein)

UmaThurman_10

UmaThurman_11
(head-to-tail connector protein)

UmaThurman_12
(head-to-tail connector protein)

UmaThurman_13
(head-to-tail connector protein)

UmaThurman_14
(major tail protein)

UmaThurman_15
(tail assembly chaperone)

UmaThurman_16
(tail assembly chaperone)

UmaThurman_17
(tape measure protein)

UmaThurman_18
(minor tail protein)

UmaThurman_19
(minor tail protein)

UmaThurman_20
(lysin A, L-ala-D-glu peptidase domain)

UmaThurman_21
(lysin A, glycosyl hydrolase domain)

UmaThurman_22
(membrane protein)

UmaThurman_23
(membrane protein)

UmaThurman_24
(membrane protein)

UmaThurman_25
(lysin B)

UmaThurman_26
(minor tail protein)

UmaThurman_27
(minor tail protein)

UmaThurman_28
(minor tail protein)

UmaThurman_29
(minor tail protein)

UmaThurman_30
(minor tail protein)

UmaThurman_31

UmaThurman_32

UmaThurman_33

UmaThurman_34

UmaThurman_35
(integrase (Y-Int))

UmaThurman_36
(immunity repressor)

UmaThurman_37
(excise)

UmaThurman_38

UmaThurman_39

UmaThurman_40

UmaThurman_41

UmaThurman_42

UmaThurman_43

UmaThurman_44

UmaThurman_45

UmaThurman_46

UmaThurman_47

UmaThurman_48

UmaThurman_49

UmaThurman_50

UmaThurman_51

UmaThurman_52

UmaThurman_53

UmaThurman_54

UmaThurman_55
(RecE exonuclease)

UmaThurman_56
(RecT ssDNA binding protein)

UmaThurman_57

UmaThurman_58

UmaThurman_59

UmaThurman_60

UmaThurman_61

UmaThurman_62

UmaThurman_63

UmaThurman_64

UmaThurman_65

UmaThurman_66

UmaThurman_67

UmaThurman_68

UmaThurman_69

UmaThurman_70

UmaThurman_71

UmaThurman_72

UmaThurman_73

UmaThurman_74

UmaThurman_75

UmaThurman_76

UmaThurman_77

UmaThurman_78

UmaThurman_79

UmaThurman_80

UmaThurman_81

UmaThurman_82

UmaThurman_83
(HNH endonuclease)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKU963251
Refseq NumberNone yet
Available Files
Final DNAMaster FileDownload