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Mycobacterium phage Weiss13
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Detailed Information for Phage Weiss13
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesMWT1013
Found ByAndy Wang
Year Found2013
Location FoundLa Jolla, CA USA
Finding InstitutionUniversity of California, San Diego
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates32.875833 N, 117.239444 W Map
Discovery NotesLoose soil with compost on top. Plenty of plants and trees growing in area.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 9, 2014
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage402
Genome length (bp)71436
Character of genome endsCircularly Permuted
GC Content55.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterR
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesSmall, clear plaques with radius of about 0.1 mm
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Weiss13_1

Weiss13_2

Weiss13_3

Weiss13_4

Weiss13_5
(terminase)

Weiss13_6
(portal protein)

Weiss13_7

Weiss13_8

Weiss13_9

Weiss13_10

Weiss13_11
(tail assembly protein)

Weiss13_12
(capsid assembly protease)

Weiss13_13

Weiss13_14

Weiss13_15
(tail sheath protein)

Weiss13_16
(major capsid protein)

Weiss13_17
(DNA/RNA binding protein)

Weiss13_18

Weiss13_19

Weiss13_20

Weiss13_21

Weiss13_22

Weiss13_23

Weiss13_24

Weiss13_25
(tail assembly chaperone)

Weiss13_26
(tail assembly chaperone)

Weiss13_27
(tape measure protein)

Weiss13_28

Weiss13_29

Weiss13_30

Weiss13_31
(minor tail protein)

Weiss13_32

Weiss13_33

Weiss13_34

Weiss13_35
(lysin A)

Weiss13_36

Weiss13_37

Weiss13_38

Weiss13_39
(lysin B)

Weiss13_40
(NrdH glutaredoxin)

Weiss13_41

Weiss13_42

Weiss13_43

Weiss13_44

Weiss13_45

Weiss13_46

Weiss13_47

Weiss13_48

Weiss13_49

Weiss13_50

Weiss13_51

Weiss13_52

Weiss13_53

Weiss13_54

Weiss13_55

Weiss13_56

Weiss13_57

Weiss13_58

Weiss13_59

Weiss13_60

Weiss13_61

Weiss13_62
(O-methyltransferase)

Weiss13_63

Weiss13_64

Weiss13_65

Weiss13_66
(DNA helicase)

Weiss13_67

Weiss13_68

Weiss13_69

Weiss13_70
(nucleotide binding protein)

Weiss13_71

Weiss13_72
(DNA polymerase III)

Weiss13_73

Weiss13_74
(DNA polymerase III)

Weiss13_75

Weiss13_76
(thymidylate synthase)

Weiss13_77

Weiss13_78
(band-7-like membrane protein)

Weiss13_79

Weiss13_80

Weiss13_81

Weiss13_82

Weiss13_83

Weiss13_84

Weiss13_85

Weiss13_86

Weiss13_87

Weiss13_88

Weiss13_89

Weiss13_90
(HNH endonuclease)

Weiss13_91
(DNA primase/polymerase)

Weiss13_92

Weiss13_93
(DNA methylase)

Weiss13_94

Weiss13_95

Weiss13_96

Weiss13_97

Weiss13_98

Weiss13_99

Weiss13_100

Submitted Annotation in DNA Master FormatDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKT591076
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 1
Pitt Freezer Box Grid# H1
Available Files
EM PictureDownload
Final DNAMaster FileDownload