CDS 92 - 430
    /note=Phagesdb Function: 
    /note=-majority of AS cluster (function unknown)
    /note=-LittleTokyo: terminase large subunit, atpase domain 
    /note=Phagesdb BLAST: terminase large subunit, ATPase domain
    /note=HHPRED: 3CPE_A (DNA packaging protein Gp17; large terminase) (e value significant)
    /note=NCBI BLAST: terminase, large subunit (ATPase domain) (e value significant)
    /note=Start codon: original
    /note=
    /note=Gets hits to terminase, large subunit; however, decided to go with hypothetical protein based on the comments in this forum: https://seaphages.org/forums/topic/5775/

CDS 444 - 752
    /note=Phagesdb Function: terminase, small subunit (AS1); dna binding protein (AS2)	
    /note=Phagesdb BLAST: top hit unknown, terminase small subunit (AS1)	
    /note=HHPRED: Terminase_4 ; Phage terminase, small subunit (e value not significant) 
    /note=NCBI BLAST: terminase, small subunit (e value significant)
    /note=Start codon: original

CDS 691 - 2325
    /note=Phagesdb Function: terminase (AS2)	
    /note=Phagesdb BLAST: terminase
    /note=HHPRED: Terminase large subunit (e value significant) 
    /note=NCBI BLAST: terminase, large subunit (nuclease domain) (e value significant)
    /note=Start codon: original
    /note=
    /note=Only called terminase, large subunit based on comments in this forum: https://seaphages.org/forums/topic/5775/

CDS 2338 - 2655
    /note=Phagesdb Function: RNA binding protein
    /note=Phagesdb BLAST: RNA binding protein
    /note=HHPRED: Conserved hypothetical protein (e value significant)
    /note=NCBI BLAST: RNA binding protein (e value significant)
    /note=Start codon: original

CDS 2669 - 4606
    /note=Phagesdb Function: portal protein 
    /note=Phagesdb BLAST: portal protein 
    /note=HHPRED: portal protein (e value significant)
    /note=NCBI BLAST: portal protein (e value significant)
    /note=Start codon: original

CDS 4626 - 5378
    /note=Phagesdb Function: capsid maturation protease	
    /note=Phagesdb BLAST: capsid maturation protease	
    /note=HHPRED: Caudovirus prohead serine protease (significant e value)
    /note=NCBI BLAST: capsid maturation protease (significant e value)
    /note=Start codon: original

CDS 5449 - 6753
    /note=Phagesdb Function: major capsid protein
    /note=Phagesdb BLAST: major capsid protein	
    /note=HHPRED: Scaffolding domain delta; Prohead I, icosahedral symmetry, HK97, phage, capsid, VIRUS; 3.5A {Escherichia phage HK97} (significant e value)
    /note=NCBI BLAST: major capsid protein	(significant e value)
    /note=Start codon: original

CDS 6824 - 7024
    /note=Phagesdb Function: minor tail protein	
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: conserved hypothetical protein (not significant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)
    /note=Start codon: original

CDS 7049 - 7636
    /note=Phagesdb Function: head-to-tail adaptor	
    /note=Phagesdb BLAST: head-to-tail adaptor	
    /note=HHPRED: Head completion protein (significant e value)
    /note=NCBI BLAST: head-to-tail adaptor
    /note=Start codon: original

CDS 7647 - 7985
    /note=Phagesdb Function: head-to-tail stopper	
    /note=Phagesdb BLAST: head-to-tail stopper	
    /note=HHPRED: head-to-tail stopper (significant e value)
    /note=NCBI BLAST: head-to-tail stopper (significant e value)
    /note=Start codon: original

CDS 7990 - 8244
    /note=Phagesdb Function: No data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: Family of unknown function (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)
    /note=Start codon: original

CDS 8237 - 8680
    /note=Phagesdb Function: tail terminator	
    /note=Phagesdb BLAST: tail terminator	
    /note=HHPRED: tail terminator	(significant e value)
    /note=NCBI BLAST: tail terminator (significant e value)
    /note=Start codon: edited to position 8237 (aligns with close relatives)

CDS 8717 - 9298
    /note=Phagesdb Function: major tail protein	
    /note=Phagesdb BLAST: major tail protein	
    /note=HHPRED: major tail protein (significant e value)
    /note=NCBI BLAST: major tail protein (significant e value)
    /note=Start codon: original

CDS 9399 - 9752
    /note=Phagesdb Function: tail assembly chaperone	
    /note=Phagesdb BLAST: tail assembly chaperone	
    /note=HHPRED: tail assembly protein (insignificant e value)
    /note=NCBI BLAST: tail assembly chaperone (significant e value)
    /note=Start codon: original

CDS 9791 - 10123
    /note=Phagesdb Function: tail assembly chaperone	
    /note=Phagesdb BLAST: tail assembly chaperone	
    /note=HHPRED: Family of unknown function (significant e value)
    /note=NCBI BLAST:  tail assembly chaperone (significant e value)
    /note=Start codon: original
    /note=
    /note=Slippery sequence: GGGGGAA

CDS 10127 - 12421
    /note=Phagesdb Function: tape measure protein	
    /note=Phagesdb BLAST: tape measure protein (AS3 subcluster)
    /note=HHPRED: tape measure protein (significant e value)
    /note=NCBI BLAST: tape measure protein (significant e value)
    /note=Start codon: original

CDS 12424 - 13923
    /note=Phagesdb Function: minor tail protein	
    /note=Phagesdb BLAST: minor tail protein	
    /note=HHPRED: Endoglucanase (significant e value)
    /note=NCBI BLAST: minor tail protein (significant e value)
    /note=Start codon: original

CDS 13934 - 15181
    /note=Phagesdb Function: minor tail protein	
    /note=Phagesdb BLAST: minor tail protein	
    /note=HHPRED: tail protein (significant e value)
    /note=NCBI BLAST: minor tail protein (significant e value)
    /note=Start codon: original

CDS 15181 - 16131
    /note=Phagesdb Function: minor tail protein	
    /note=Phagesdb BLAST: minor tail protein	
    /note=HHPRED: Protein of unknown function (insignificant e value)
    /note=NCBI BLAST: minor tail protein (significant e value)
    /note=Start codon: edited to position 15181 based on BLAST and 1:1 with LittleTokyo

CDS 16134 - 16736
    /note=Phagesdb Function: minor tail protein	
    /note=Phagesdb BLAST: minor tail protein	
    /note=HHPRED: putative baseplate protein (insignificant e value)
    /note=NCBI BLAST: minor tail protein (significant e value)

CDS 16736 - 17161
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: Protein of unknown function (insignificant e value)
    /note=NCBI BLAST: membrane protein (significant e value)
    /note=
    /note=called membrane protein based on 4 hits by DeepTMHMM and confirmed with SOSUI

CDS 17177 - 17485
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: Phage shock protein B (significant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 17547 - 18524
    /note=Phagesdb Function: endolysin (AS cluster)
    /note=Phagesdb BLAST: endolysin
    /note=HHPRED: hydrolase (significant e value)
    /note=NCBI BLAST: endolysin (significant e value); many hits to LysM peptidoglycan domain-containing protein too

CDS 18536 - 18868
    /note=Phagesdb Function: holin
    /note=Phagesdb BLAST: holin (AS1 subcluster)
    /note=HHPRED: holin (insignificant e value)
    /note=NCBI BLAST: holin (significant e value)
    /note=
    /note=called membrane protein based on two DeepTMHMM hits; confirmed by SOSUI

CDS complement (18971 - 19171)
    /note=Phagesdb Function: phosphoesterase 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: a.25.3.1 (A:) automated matches {Mycobacterium tuberculosis [TaxId: 83332]} | CLASS: All alpha proteins, FOLD: Ferritin-like, SUPFAM: EsxAB dimer-like, FAM: ESAT-6 like (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS complement (19168 - 19359)
    /note=Phagesdb Function: helix-turn-helix dna binding domain protein	
    /note=Phagesdb BLAST: helix-turn-helix DNA-binding domain protein	
    /note=HHPRED: helix-turn-helix, superhelix, DNA BINDING PROTEIN (significant e value)
    /note=NCBI BLAST: helix-turn-helix, superhelix, DNA BINDING PROTEIN (significant e value)

CDS complement (19356 - 19514)
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: DNA replication, DNA BINDING PROTEIN-REPLICATION COMPLEX (insignificant e value)
    /note=NCBI BLAST: no data available

CDS complement (19531 - 19740)
    /note=Phagesdb Function: no data available
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: Protocatechuate 3,4-dioxygenase beta chain; dioxygen activation, non-heme iron, intradiol dioxygenase, aromatic ring cleavage, catalytic intermediates, OXIDOREDUCTASE; HET: MUC, BME, 3N8; 1.35A {Pseudomonas putida} SCOP: b.3.6.1 (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 19972 - 20232
    /note=Phagesdb Function: tape measure protein	
    /note=Phagesdb BLAST: tape measure protein (top hit), function unknown (AS2)
    /note=HHPRED: Transglutaminase N-terminal domain (insignificant e value)
    /note=NCBI BLAST: no data available

CDS complement (19743 - 20135)
    /note=Phagesdb Function: tape measure protein (top hit)
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: TraB; Symmetry alteration, Symmetry mismatch, Drug resistance, Type IV secretion system (T4SS), STRUCTURAL PROTEIN; 2.95A {Salmonella typhi} (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS complement (20213 - 20935)
    /note=Phagesdb Function: portal protein	(top hit)
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: fvmX5 ; FtsH ternary system domain X5 (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS complement (21229 - 21414)
    /note=Phagesdb Function: minor tail protein (K2)
    /note=Phagesdb BLAST: minor tail protein (K2)		
    /note=HHPRED: Domain of unknown function (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS complement (21570 - 21830)
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: Protein of unknown function (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS complement (21842 - 22393)
    /note=Phagesdb Function: dna methylase (BC2)
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: zinc_ribbon_13 ; Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 22406 - 22621
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: f.23.12.0 (D:9-45) automated matches {Mastigocladus laminosus [TaxId: 83541]} | CLASS: Membrane and cell surface proteins and peptides, FOLD: Single transmembrane helix, SUPFAM: ISP transmembrane anchor, FAM: automated matches	 (insignificant e value)
    /note=NCBI BLAST: no data available

CDS complement (22243 - 22599)
    /note=Phagesdb Function: hnh endonuclease	
    /note=Phagesdb BLAST: hnh endonuclease	
    /note=HHPRED: CRISPR-associated endonuclease (insignificant e value)
    /note=NCBI BLAST: hnh endonuclease (significant e value)

CDS complement (22596 - 22766)
    /note=Phagesdb Function: helix-turn-helix dna binding domain	
    /note=Phagesdb BLAST: helix-turn-helix DNA-binding domain protein (present in AS)
    /note=HHPRED: Protein of unknown function (insignificant e value)
    /note=NCBI BLAST: helix-turn-helix DNA binding domain protein [Mycobacterium phage Phanphagia] (significant e value)

CDS 22812 - 22997
    /note=Phagesdb Function: dnae-like dna polymerase iii alpha	
    /note=Phagesdb BLAST: DnaE-like DNA polymerase III alpha	(cluster U and AD)
    /note=HHPRED: Protein of unknown function (insignificant e value)
    /note=NCBI BLAST: no data available

CDS complement (23237 - 23509)
    /note=Phagesdb Function: dna primase/polymerase (cluster AC), lysin a (cluster EC)
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: Asteropsin A; cystine knot, marine sponge, MARINE KNOTTIN, TOXIN; HET: PCA, MOH; 0.87A {Asteropus}	(insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS complement (23569 - 23907)
    /note=Phagesdb Function: minor tail protein (K1)
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: GrlA; Beta Barrel, HTH motif, Regulator, TRANSCRIPTION REGULATOR; HET: MSE, PG4; 2.7A {Escherichia coli} (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (e value significant)

CDS 24536 - 24901
    /note=Phagesdb Function: tape measure protein (K1), integrase (s-int)(FP), ftsk-like DNA translocase (DB) 
    /note=Phagesdb BLAST: tape measure protein (K1), serine integrase (FP)
    /note=HHPRED: Envelope glycoprotein L; glycoprotein, receptor, complex, virus entry, VIRAL PROTEIN; HET: MAN, FUC, NAG; 3.2A {Homo sapiens}	(insignificant e value)
    /note=NCBI BLAST: no data available

CDS 24905 - 25096
    /note=Phagesdb Function: lysin a (B10)
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: WH2_Wc_Cobl; third Wiskott Aldrich syndrome homology region 2 (WH2 motif) repeat (called Wc) found in protein Cordon-Bleu (Cobl) and similar proteins.	(insignificant e value)
    /note=NCBI BLAST: no data available

CDS complement (23998 - 25191)
    /note=Phagesdb Function: integrase, (y-int)
    /note=Phagesdb BLAST: tyrosine integrase	
    /note=HHPRED: Recombinase CRE; CRE RECOMBINASE, HOLLIDAY JUNCTION, RECOMBINATION, COMPLEX (RECOMBINASE-DNA), HYDROLASE, LIGASE-DNA COMPLEX; 2.0A {Enterobacteria phage P1} SCOP: a.60.9.1, d.163.1.1 (significant e value)
    /note=NCBI BLAST: tyrosine integrase (e value significant)
    /note=Start codon: edited to position 25191 based on BLAST and 1:1 with LittleTokyo

CDS complement (25184 - 25555)
    /note=Phagesdb Function: immunity repressor
    /note=Phagesdb BLAST: immunity repressor		
    /note=HHPRED: Nucleoid-associated protein EspR; ALL HELICAL, HELIX-TURN-HELIX MOTIF, TRANSACTIONAL REGULATOR, DNA BINDING, TRANSCRIPTION; 3.3A {Mycobacterium tuberculosis} (significant e value)
    /note=NCBI BLAST: immunity repressor (e value significant)

CDS 25752 - 26012
    /note=Phagesdb Function: helix-turn-helix dna binding domain	
    /note=Phagesdb BLAST: helix-turn-helix DNA binding domain protein 		
    /note=HHPRED: ComR; Streptococcus, Competence, Quorum sensing, ComR, TRANSCRIPTION REGULATOR; 2.9A {Streptococcus suis (strain 05ZYH33)} (significant e value)
    /note=NCBI BLAST: helix-turn-helix DNA binding domain	 (e value significant)

CDS 26009 - 26257
    /note=Phagesdb Function: helix-turn-helix dna-binding domain protein		
    /note=Phagesdb BLAST: helix-turn-helix DNA-binding domain protein	 		
    /note=HHPRED: a.6.1.5 (B:1-69) automated matches {Escherichia phage [TaxId: 10710]} | CLASS: All alpha proteins, FOLD: Putative DNA-binding domain, SUPFAM: Putative DNA-binding domain, FAM: Terminase gpNU1 subunit domain (significant e value); significant hits with excisionase
    /note=NCBI BLAST: helix-turn-helix DNA binding domain protein (e value significant)
    /note=
    /note=tyrosine integrase and immunity repressor present; HHPRED hits with excisionase

CDS 26254 - 27282
    /note=Phagesdb Function: rece-like exonuclease		
    /note=Phagesdb BLAST: RecE-like exonuclease	 		
    /note=HHPRED: a.6.1.5 (B:1-69) automated matches {Escherichia phage [TaxId: 10710]} | CLASS: All alpha proteins, FOLD: Uncharacterized protein R354; MIMIVIRE, Cas4-like, nuclease, R354, NUCLEAR PROTEIN; 2.806A {Acanthamoeba polyphaga mimivirus}	(significant e value)
    /note=NCBI BLAST: RecE-like exonuclease (e value significant)

CDS 27283 - 28095
    /note=Phagesdb Function: rect-like dna pairing protein	
    /note=Phagesdb BLAST: rect-like dna pairing protein (AS2)
    /note=HHPRED: RecT; DNA Recombination, DNA Annealing, DNA BINDING PROTEIN; 4.5A {Listeria innocua Clip11262} (significant e value)
    /note=NCBI BLAST: RecT-like DNA pairing protein	(significant e value)

CDS 28108 - 28461
    /note=Phagesdb Function: helix-turn-helix dna-binding domain protein	
    /note=Phagesdb BLAST: helix-turn-helix dna-binding domain protein	
    /note=HHPRED: a.4.5.28 (A:) automated matches {Yersinia pseudotuberculosis [TaxId: 502800]} | CLASS: All alpha proteins, FOLD: DNA/RNA-binding 3-helical bundle, SUPFAM: `Winged helix` DNA-binding domain, FAM: MarR-like transcriptional regulators (significant e value)
    /note=NCBI BLAST: helix-turn-helix DNA binding domain (significant e value)

CDS 28458 - 28919
    /note=Phagesdb Function: rusa-like resolvase	
    /note=Phagesdb BLAST: rusa-like resolvase	
    /note=HHPRED: d.79.6.1 (A:) automated matches {Escherichia coli [TaxId: 562]} | CLASS: Alpha and beta proteins (a+b), FOLD: Bacillus chorismate mutase-like, SUPFAM: Holliday junction resolvase RusA, FAM: Holliday junction resolvase RusA	(significant e value)
    /note=NCBI BLAST: RusA family crossover junction endodeoxyribonuclease [Paenarthrobacter sp. NPDC089714] >gb|MFJ4168349.1| RusA family crossover junction endodeoxyribonuclease [Paenarthrobacter sp. NPDC089714]	(significant e value)
    /note=Start codon: edited to position 28458 based on BLAST and 1:1 with LittleTokyo

CDS 28916 - 29704
    /note=Phagesdb Function: helix-turn-helix dna binding domain	
    /note=Phagesdb BLAST: helix-turn-helix dna binding domain	protein
    /note=HHPRED: Hypothetical Protein; Structural Genomics, NIAID, National Institute of Allergy and Infectious Diseases, Center for Structural Genomics of Infectious; HET: MSE, SO4; 1.8A {Vibrio cholerae O1 biovar El Tor} (significant e value)
    /note=NCBI BLAST: helix-turn-helix DNA binding domain protein [Arthrobacter phage Renna12]	(significant e value)

CDS 29701 - 31119
    /note=Phagesdb Function: dna methylase (AS)
    /note=Phagesdb BLAST: DNA methylase	
    /note=HHPRED: replisome organizer; helical bipartite natively unfolded domain, replication; HET: MSE; 2.4A {Bacillus phage SPP1} SCOP: l.1.1.1, a.179.1.1	(significant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 31116 - 31592
    /note=Phagesdb Function: no data for AS, ribonucleotide reductase (BD2, A15), capsid maturation protease (EG), minor tail protein (BQ)
    /note=Phagesdb BLAST: function unknown		
    /note=HHPRED: replisome organizer; helical bipartite natively unfolded domain, replication; HET: MSE; 2.4A {Bacillus phage SPP1} SCOP: l.1.1.1, a.179.1.1	(significant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 31585 - 32166
    /note=Phagesdb Function: portal protein	(CS3), minor tail protein (A3, A10), dnae-like dna polymerase iii alpha	(CR)
    /note=Phagesdb BLAST: function unknown		
    /note=HHPRED: rYjdM_Zn_Ribbon ; PhnA Zinc-Ribbon	(insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS complement (32167 - 32292)
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: DciA ; Dna[CI] antecedent, DciA (insignificant e value)
    /note=NCBI BLAST: no data available

CDS 32628 - 32783
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: Uncharacterized lipoprotein YifL; Lipopolysaccharide, Lipoprotein, LptDE, MEMBRANE PROTEIN; HET: PCJ; 2.98A {Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)} (insignificant e value)
    /note=NCBI BLAST: membrane protein (significant e value)
    /note=
    /note=Called membrane protein based on two membrane hits with DeepTMHMM; confirmed with SOSUI

CDS 32780 - 33019
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: Amphi-Trp ; Amphi-Trp domain (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)
    /note=Start codon: edited to position 32780 based on BLAST and 1:1 with LittleTokyo

CDS 33012 - 33383
    /note=Phagesdb Function: deoxycytidylate deaminase	 
    /note=Phagesdb BLAST: deoxycytidylate deaminase	
    /note=HHPRED:hypothetical protein (significant e value)
    /note=NCBI BLAST: deoxycytidylate deaminase (significant e value)

CDS 34053 - 34781
    /note=Phagesdb Function: nuct-like nuclease			 
    /note=Phagesdb BLAST: NucT-like nuclease			
    /note=HHPRED: Nuclease NucT; Endonuclease, DNA BINDING PROTEIN; HET: GOL, ACT; 1.58A {Helicobacter pylori} (significant e value)
    /note=NCBI BLAST: NucT-like nuclease (significant e value)

CDS 34781 - 35047
    /note=Phagesdb Function: major capsid and protease fusion protein (EE)		 
    /note=Phagesdb BLAST: function unknown (for AS)			
    /note=HHPRED:Designed beta-arch; DE NOVO PROTEIN; HET: 4G6, DAL, NH2, DPR, ACE, 4FU; NMR {N/A}(insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 35044 - 35391
    /note=Phagesdb Function: terminase, small subunit	
    /note=Phagesdb BLAST: hypothetical protein		
    /note=HHPRED:Terminase small subunit	(significant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 35388 - 35513
    /note=Phagesdb Function: No data available
    /note=Phagesdb BLAST: function unknown		
    /note=HHPRED: Family of unknown function	(insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 35510 - 35734
    /note=Phagesdb Function: No data available
    /note=Phagesdb BLAST: function unknown		
    /note=HHPRED: AbiJ_NTD5 ; AbiJ N-terminal domain 5	(insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 35734 - 35904
    /note=Phagesdb Function: No data available
    /note=Phagesdb BLAST: function unknown		
    /note=HHPRED: LysW-like_globular ; Alpha-aminoadipate carrier protein LysW-like, globular domain	(insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 35891 - 36022
    /note=Phagesdb Function: No data available
    /note=Phagesdb BLAST: function unknown		
    /note=HHPRED: HBS1-like protein; Translation, Elongation, Ribosome; HET: GCP, MG; 3.47A {Oryctolagus cuniculus}	(insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 36019 - 36225
    /note=Phagesdb Function: no data available	 
    /note=Phagesdb BLAST: function unknown 			
    /note=HHPRED:  FhaA_N ; FhaA, N-terminal domain (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)
    /note=Start codon: edited to position 36019 based on BLAST and 1:1 alignment with LittleTokyo

CDS 36358 - 36645
    /note=Phagesdb Function: dihydrofolate reductase	 (DL)		 
    /note=Phagesdb BLAST: function unknown 			
    /note=HHPRED: Protein of unknown function(insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 36642 - 36851
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown 
    /note=HHPRED: Domain of unknown function (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 36848 - 37045
    /note=Phagesdb Function: capsid maturation protease (EA9) 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: SLT_L ; Soluble lytic murein transglycosylase L domain (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 37042 - 37242
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: ZIP_Gal4-like_2; Leucine zipper Dimerization coil of Gal4-like transcription factors. The Gal4p family of transcriptional activators contain an N-terminal DNA-binding domain with a Zn2Cys6 binuclear cluster that interact with CCG triplets and a leucine zipper-like heptad repeat that dimerizes. (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 37239 - 37424
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: Domain of unknown function (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 37421 - 37567
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: fno data available for other phages	
    /note=HHPRED: YdjO ; Cold-inducible protein YdjO (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)
    /note=Start codon: edited to position 37421 based on 1:1 alignment with Ruchi, Chickaboom, and Basilisk

CDS 37564 - 37842
    /note=Phagesdb Function: riib-like protein (BK2) 
    /note=Phagesdb BLAST: no data available for other phages	
    /note=HHPRED: YjdM_Zn_Ribbon ; PhnA Zinc-Ribbon (significant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)

CDS 37839 - 37967
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown		
    /note=HHPRED: DUF1660 ; Prophage protein (DUF1660) (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)
    /note=Start codon: original

CDS 37979 - 38128
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: ADYC ; ADYC domain (insignificant e value)
    /note=NCBI BLAST: 	hypothetical protein (significant e value)
    /note=Start codon: edited to position 37979 based on the Starterator and 1:1 alignment with LittleTokyo

CDS 38196 - 38363
    /note=Phagesdb Function: no data available 
    /note=Phagesdb BLAST: function unknown	
    /note=HHPRED: FliH ; Flagellar assembly protein FliH (insignificant e value)
    /note=NCBI BLAST: hypothetical protein (significant e value)
    /note=Start codon: original

CDS 38347 - 38604
    /note=Phagesdb Function: helix-turn-helix dna binding domain protein (AS2)	
    /note=Phagesdb BLAST: helix-turn-helix dna binding domain	
    /note=HHPRED: AlpA family phage regulatory protein; excisionase, mobile genetic elements, recombination, DNA BINDING PROTEIN; 2.11A {Achromobacter xylosoxidans NBRC 15126 = ATCC 27061} (significant e value)
    /note=NCBI BLAST: helix-turn-helix dna binding domain	(significant e value)

CDS 38862 - 39140
    /note=Phagesdb Function: hnh endonuclease	
    /note=Phagesdb BLAST: hnh endonuclease	
    /note=HHPRED: CRISPR-associated endonuclease Cas9; Inhibitor, Complex, VIRAL PROTEIN; HET: NI; 2.097A {Staphylococcus aureus} (significant e value)
    /note=NCBI BLAST: HNH endonuclease  (significant e value)
    /note=Start codon: edited to position 38862 (aligns with close relatives)

Genes added in gaps (Only added in the DNA Master Minimal file):
•	SEA_ANTRICE_36: hypothetical protein

Deleted phams in the DNA MASTER minimal file (Genes not deleted in PECAAN):

•	Phams 29, 38, 41, 42, 55 in PECAAN