CDS complement (368 - 526)
  /gene="1"
  /product="gp1"
  /function="hypothetical protein"
  /locus tag="Casablancas_1"
    /note=Original Glimmer call @bp 526 has strength 2.39; Genemark calls start at 514
    /note=SSC: 526-368 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_MUSETTA_2 [Microbacterium phage Musetta] ],,NCBI, q1:s1 100.0% 8.91379E-29 GAP: 191 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.794, -6.0867266611467965, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_MUSETTA_2 [Microbacterium phage Musetta] ],,AXH50162,98.0769,8.91379E-29 SIF-HHPRED:  SIF-Syn: NKF synteny wit DustyDino, Musetta, Yuma, etc.
    /note=SSC; [526-368], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Matches with Meusetta g2, e value of 8.91379e-29, coverage: 100%, Query 1 to subject 1, NCBI ], Gap; [191], LO; [NO], RBS; [kibler6,16, 1.794, -6.087], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [45.5, 17.307, 35, 10-19, 1-10, PF20165.3], SIF-Syn; [DustyDino g2, Musetta g2, Yuma g2]

CDS complement (718 - 906)
  /gene="2"
  /product="gp2"
  /function="hypothetical protein"
  /locus tag="Casablancas_2"
    /note=Original Glimmer call @bp 906 has strength 4.81; Genemark calls start at 990
    /note=SSC: 906-718 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_118 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 2.41056E-36 GAP: 297 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.999, -4.613842206812587, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_118 [Microbacterium phage Lyell] ],,AXC36110,100.0,2.41056E-36 SIF-HHPRED:  SIF-Syn: NKF, matches with Lyell, Musetta, and Welcome, etc.
    /note=SSC; [906-718], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Matches with Lyell g3, evalue of 2.41e-36, Coverage: 100%, Query 1 to subject 1, NCBI], Gap; [297], LO; [NO], RBS; [kibler6,11, 1.999, -4.614], F; [NKF], SIF-BLAST; [], SIF-HHPred; [67.1, 25.8065, 8, 31-47, 146-162, 2LCQ_A],  SIF-Syn; [Lyell g3, Musetta g4, Welcome 4]

CDS complement (1204 - 1506)
  /gene="3"
  /product="gp3"
  /function="hypothetical protein"
  /locus tag="Casablancas_3"
    /note=Original Glimmer call @bp 1506 has strength 2.07; Genemark calls start at 1314
    /note=SSC: 1506-1204 CP: no SCS: both-gl ST: NI BLAST-Start: [hypothetical protein SEA_NECROPHOXINUS_5 [Microbacterium phage Necrophoxinus] ],,NCBI, q1:s1 100.0% 7.55875E-66 GAP: 3 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.909, -4.8822772450371135, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_NECROPHOXINUS_5 [Microbacterium phage Necrophoxinus] ],,QWS69371,99.0,7.55875E-66 SIF-HHPRED:  SIF-Syn: NKF
    /note=SSC; [521-363], CP; [Yes], SCS; [Both], ST; [NI], Blast-Start; [Lyell, g2, Phages DB, q1: s1, 100%, 0], Gap; [-4], LO; [No], RBS; [Kibler6, Karlin Medium, 1.828, -6.087, No], F; [NKF], SIF; [NKF, NKF, NKF]
    /note=StevieWelch gene 2 matches StevieWelch gene 120 100%

CDS complement (1510 - 1983)
  /gene="4"
  /product="gp4"
  /function="hypothetical protein"
  /locus tag="Casablancas_4"
    /note=Original Glimmer call @bp 1983 has strength 12.56; Genemark calls start at 1983
    /note=SSC: 1983-1510 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_ASEGATO_6 [Microbacterium phage ASegato] ],,NCBI, q1:s1 100.0% 6.42369E-111 GAP: 80 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.749, -5.080915947802713, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_ASEGATO_6 [Microbacterium phage ASegato] ],,WNO25902,99.3631,6.42369E-111 SIF-HHPRED:  SIF-Syn: 
    /note=SSC; [1983-1510], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [ Matches with DustyDino g2, 100 q:1 s:1, 6.42369e-111], Gap; [80], LO; [YES], RBS; [kibler6, 10, 1.749, -5.059], F; [NKF], SIF-BLAST; [], SIF-HHPred; [17.9, 29.2994, 820, 46-92, 106-164, PF16305.10], SIF-Syn; []

CDS complement (2064 - 2450)
  /gene="5"
  /product="gp5"
  /function="hypothetical protein"
  /locus tag="Casablancas_5"
    /note=Original Glimmer call @bp 2450 has strength 14.36; Genemark calls start at 2450
    /note=SSC: 2450-2064 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_MUSETTA_120 [Microbacterium phage Musetta] ],,NCBI, q1:s1 100.0% 3.06134E-86 GAP: 27 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.925, -5.058605177999316, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_MUSETTA_120 [Microbacterium phage Musetta] ],,AXH50167,100.0,3.06134E-86 SIF-HHPRED:  SIF-Syn: 
    /note=SSC; [2450-2064], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [], Gap; [27], LO; [YES], RBS; [kibler6, 13, 1.925, -5.059], F; [NKF], SIF-BLAST; [], SIF-HHPred; [93.9, 44.53312, 1, 67-124, 22-79, PF02699.20], SIF-Syn; []

CDS complement (2478 - 2855)
  /gene="6"
  /product="gp6"
  /function="hypothetical protein"
  /locus tag="Casablancas_6"
    /note=Original Glimmer call @bp 2855 has strength 15.45; Genemark calls start at 2855
    /note=SSC: 2855-2478 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_ERENYEAGER_5 [Microbacterium phage Erenyeager] ],,NCBI, q1:s1 100.0% 3.2011E-84 GAP: 66 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.758, -2.939678097737297, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_ERENYEAGER_5 [Microbacterium phage Erenyeager] ],,WMI33880,99.2,3.2011E-84 SIF-HHPRED:  SIF-Syn: NKF, Lyell, StevieWelch, Erenyeager
    /note=SSC; [2855-2478], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Matches with Lyell g8, 100%, q:1 s:1, 7.07431e-83 ], Gap; [66], LO; [YES], RBS; [kibler6, 10, 2.759, -2.94], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [99.9, 77.6, 3.3e-24, 25-122, 1-95, PF12098.13], SIF-Syn; [NKF, Lyell g8, StevieWelch g8]

CDS complement (2922 - 3200)
  /gene="7"
  /product="gp7"
  /function="hypothetical protein"
  /locus tag="Casablancas_7"
    /note=Original Glimmer call @bp 3200 has strength 1.69; Genemark calls start at 3200
    /note=SSC: 3200-2922 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_WELCOME_9 [Microbacterium phage Welcome] ],,NCBI, q1:s1 100.0% 8.49465E-60 GAP: 10 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.937, -2.5594668560256912, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_WELCOME_9 [Microbacterium phage Welcome] ],,QYC54131,100.0,8.49465E-60 SIF-HHPRED:  SIF-Syn: 
    /note=SSC; [3200-2922], CP; [Yes], SCS; [both], ST; [], Blast-Start; [], Gap; [10], LO; [YES], RBS; [kibler6, 10, 2.937, -2.559], F; [NKF], SIF-BLAST; [], SIF-HHPred; [57.2, 17.3913, 14, 55-71, 17-33, PF22910.1], SIF-Syn; []

CDS complement (3211 - 3366)
  /gene="8"
  /product="gp8"
  /function="hypothetical protein"
  /locus tag="Casablancas_8"
    /note=Original Glimmer call @bp 3366 has strength 5.53; Genemark calls start at 3366
    /note=SSC: 3366-3211 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_10 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 1.07778E-25 GAP: 408 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.816, -2.8793565916978188, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_10 [Microbacterium phage Lyell] ],,AXC36117,98.0392,1.07778E-25 SIF-HHPRED:  SIF-Syn: NKF, Lyell, StevieWelch, DustyDino
    /note=SSC; [3366-3211], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Matches with Lyell g10, 100, q:1 s:1, 1.07778e-25], Gap; [408], LO; [YES], RBS; [kibler6, 11, 2.816, -2.879], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [49.2, 29.4118, 67, 27-42, 35-50, PF19522.4], SIF-Syn; [NKF, Lyell, StevieWelch, DustyDino]

CDS 3775 - 3927
  /gene="9"
  /product="gp9"
  /function="hypothetical protein"
  /locus tag="Casablancas_9"
    /note=Original Glimmer call @bp 3775 has strength 11.75; Genemark calls start at 3775
    /note=SSC: 3775-3927 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_NECROPHOXINUS_11 [Microbacterium phage Necrophoxinus]],,NCBI, q1:s1 100.0% 2.86138E-23 GAP: 408 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.071, -2.356391881054909, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_NECROPHOXINUS_11 [Microbacterium phage Necrophoxinus]],,QWS69377,100.0,2.86138E-23 SIF-HHPRED:  SIF-Syn: NKF, Welcome, Lyell, and DustyDino
    /note=SSC; [3775-3927], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Matches with Welcome, 100, q:1 s:1, 6.31203e-23], Gap; [153], LO; [YES], RBS; [kibler6, 9, 3.071, -2.356], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [84.2, 56, 4.9, 15-43, 10-38, 6WA9_M], SIF-Syn; [NKF, Welcome g11, Lyell g11, DustyDino g11]

CDS 3930 - 4229
  /gene="10"
  /product="gp10"
  /function="hypothetical protein"
  /locus tag="Casablancas_10"
    /note=Original Glimmer call @bp 3930 has strength 12.43; Genemark calls start at 3930
    /note=SSC: 3930-4229 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_MUSETTA_12 [Microbacterium phage Musetta]],,NCBI, q1:s1 100.0% 1.86394E-62 GAP: 2 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.665, -3.2181355793933353, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_MUSETTA_12 [Microbacterium phage Musetta]],,QCS26959,97.9798,1.86394E-62 SIF-HHPRED:  SIF-Syn: NKF, Muesetta, Welcome, Fork
    /note=SSC; [3930-4229], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Matches with Muesetta g12, 100, q:1 s:1, 1.86394e-62 ], Gap; [2], LO; [NO], RBS; [kibler6, 9, 2.665, -3.218], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [], SIF-Syn; [NKF, Muesetta, Welcome, Fork]

CDS 4232 - 4618
  /gene="11"
  /product="gp11"
  /function="hypothetical protein"
  /locus tag="Casablancas_11"
    /note=Original Glimmer call @bp 4232 has strength 11.93; Genemark calls start at 4232
    /note=SSC: 4232-4618 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_FORK_10 [Microbacterium phage Fork]],,NCBI, q1:s1 100.0% 1.70093E-84 GAP: 2 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.644, -3.3226484487933954, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_FORK_10 [Microbacterium phage Fork]],,AXC36239,99.2188,1.70093E-84 SIF-HHPRED:  SIF-Syn: NKF, Fork, Yuma, Welcome
    /note=SSC; [4232-4618], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [ Matches with Fork g10, 100, q:1 s:1, 1.70093e-84], Gap; [2], LO; [NO], RBS; [kibler6, 12, 2.644, -3.323], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [52, 13.2812, 44, 10-27, 57-74, 4QY7_A], SIF-Syn; [NKF, Fork, Yuma, Welcome]

CDS 4615 - 4767
  /gene="12"
  /product="gp12"
  /function="DNA binding protein"
  /locus tag="Casablancas_12"
    /note=Original Glimmer call @bp 4615 has strength 11.21; Genemark calls start at 4615
    /note=SSC: 4615-4767 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_14 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 2.74339E-27 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.414, -3.75071250087134, no F: DNA binding protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_14 [Microbacterium phage Lyell] ],,AXC36121,100.0,2.74339E-27 SIF-HHPRED:  SIF-Syn: DustyDino
    /note=SSC; [4615-4767], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Matches with DustyDino g13, 100, q:1 s:1, 4.05071e-26], Gap; [-4], LO; [NO], RBS; [kibler6, 9, 2.414, -3.751], F; [DNA Binding Protein], SIF-BLAST; [], SIF-HHPred; [97.7, 74, .000025, 12-49, 5-40, PF09526.15], SIF-Syn; [DustyDino]
    /note=Blast through NCBI found that DustyDino function of DNA Binding protein was a match as well was more recently approved.

CDS 4767 - 5012
  /gene="13"
  /product="gp13"
  /function="hypothetical protein"
  /locus tag="Casablancas_13"
    /note=Original Glimmer call @bp 4767 has strength 13.96; Genemark calls start at 4767
    /note=SSC: 4767-5012 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RUNNINGBROOK_14 [Microbacterium phage RunningBrook]],,NCBI, q1:s1 100.0% 8.39914E-50 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.448, -3.738562143838384, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RUNNINGBROOK_14 [Microbacterium phage RunningBrook]],,XOE90306,97.5309,8.39914E-50 SIF-HHPRED:  SIF-Syn: Welcome, DustyDino, Lyell
    /note=SSC; [4767-5012], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Matches with DustyDino g15, 100, q:1 s:1, 8.46409e-50], Gap; [-1], LO; [NO], RBS; [kibler6,12, 2.448, -3.729], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [91.2, 18.5185, .81, 7-22, 9-24, cd15485], SIF-Syn; [DustyDino, Welcome, Lyell]

CDS 5009 - 5251
  /gene="14"
  /product="gp14"
  /function="hypothetical protein"
  /locus tag="Casablancas_14"
    /note=Original Glimmer call @bp 5009 has strength 6.41; Genemark calls start at 5009
    /note=SSC: 5009-5251 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_NECROPHOXINUS_16 [Microbacterium phage Necrophoxinus]],,NCBI, q2:s1 98.75% 1.56733E-49 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.071, -2.356391881054909, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_NECROPHOXINUS_16 [Microbacterium phage Necrophoxinus]],,QWS69382,98.7342,1.56733E-49 SIF-HHPRED:  SIF-Syn: Fork, Necrophoxinus, Lyell
    /note=SSC; [5009-5261], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Fork g13, 100, q:1 s:1, 2.71492e-49], Gap; [-4], LO; [YES], RBS; [kibler6, 9, 3.071, -2.356], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [53.4, 20, 25, 29-45, 51-66, 9G6K_LQ ], SIF-Syn; [Fork, Necrophoxinus, Lyell]

CDS 5385 - 5771
  /gene="15"
  /product="gp15"
  /function="hypothetical protein"
  /locus tag="Casablancas_15"
    /note=Original Glimmer call @bp 5385 has strength 11.21; Genemark calls start at 5385
    /note=SSC: 5385-5771 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_17 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 1.91441E-85 GAP: 133 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.071, -2.338663114094478, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_17 [Microbacterium phage Lyell] ],,AXC36124,100.0,1.91441E-85 SIF-HHPRED:  SIF-Syn: Necrophoxinus, Fork, Lyell
    /note=SSC; [5385-5771], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Lyell g17, 100, q:1 s:1, 1.91441e-85], Gap; [133], LO; [YES], RBS; [kibler6, 11, 3.071, -2.339], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [92.3, 64.8438, 1.6, 11-94, 55-144, 7OFO_V ], SIF-Syn; [Necrophoxinus, Fork, Lyell]

CDS 5771 - 6010
  /gene="16"
  /product="gp16"
  /function="hypothetical protein"
  /locus tag="Casablancas_16"
    /note=Original Glimmer call @bp 5771 has strength 6.31; Genemark calls start at 5771
    /note=SSC: 5771-6010 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_18 [Microbacterium phage Lyell]],,NCBI, q1:s1 100.0% 1.4806E-50 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.12, -4.294054598558697, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_18 [Microbacterium phage Lyell]],,AXC36125,100.0,1.4806E-50 SIF-HHPRED:  SIF-Syn: Lyell, DustyDino, Fork
    /note=SSC; [5771-6010], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Lyell g18, 100, q:1 s:1, ], Gap; [-1], LO; [NO], RBS; [kibler6, 10, 2.120, -4.294], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [65.3, 50.6329, 51, 2-42, 11-47, 3BID_E], SIF-Syn; [Lyell, DustyDino, Fork]

CDS 6007 - 6207
  /gene="17"
  /product="gp17"
  /function="hypothetical protein"
  /locus tag="Casablancas_17"
    /note=Original Glimmer call @bp 6007 has strength 11.93; Genemark calls start at 6007
    /note=SSC: 6007-6207 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_DUSTYDINO_19 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 6.584E-38 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.84, -2.8454123590742793, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_19 [Microbacterium phage DustyDino] ],,URM87424,98.4848,6.584E-38 SIF-HHPRED:  SIF-Syn: DustyDino, Fork, Musetta
    /note=SSC; [6007-6207], CP; [Yes], SCS; [Both], ST; [SS], Blast-Start; [DustyDino g19, 100, q:1 s:1, 6.584e-38], Gap; [-4], LO; [NO], RBS; [kibler6, 9, 2.840, -2.845], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [47.3, 78.7879, 190, 13-65, 353-407, 7NPD_A ], SIF-Syn; [DustyDino, Fork, Musetta]

CDS 6200 - 6364
  /gene="18"
  /product="gp18"
  /function="hypothetical protein"
  /locus tag="Casablancas_18"
    /note=Original Glimmer call @bp 6200 has strength 12.49; Genemark calls start at 6200
    /note=SSC: 6200-6364 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_FORK_17 [Microbacterium phage Fork]],,NCBI, q1:s1 100.0% 4.16161E-28 GAP: -8 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.992, -2.5052746077145835, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_FORK_17 [Microbacterium phage Fork]],,AXC36246,100.0,4.16161E-28 SIF-HHPRED:  SIF-Syn: Fork, DustyDino, Lyell
    /note=SSC; [6200-6364], CP; [Yes], SCS; [], ST; [], Blast-Start; [Fork g17, 100, q:1 s:1, 4.16161e-28], Gap; [-8], LO; [NO], RBS; [kibler6, 11, 2.992, -2.505], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [60.9, 38.8889, 30, 32-53, 52-74, SCOP_d2ljpa_], SIF-Syn; [Fork, DustyDino, Lyell]

CDS 6373 - 6639
  /gene="19"
  /product="gp19"
  /function="hypothetical protein"
  /locus tag="Casablancas_19"
    /note=Original Glimmer call @bp 6373 has strength 10.3; Genemark calls start at 6373
    /note=SSC: 6373-6639 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_FORK_18 [Microbacterium phage Fork]],,NCBI, q1:s1 100.0% 1.13237E-54 GAP: 8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.335, -3.9166971242758706, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_FORK_18 [Microbacterium phage Fork]],,AXC36247,98.8636,1.13237E-54 SIF-HHPRED:  SIF-Syn: Fork, DustyDino, Lyell
    /note=SSC; [6373-6639], CP; [Yes], SCS; [Both], ST; [SS], Blast-Start; [Fork g18, 100, q:1 s:1, 1.13237e-54], Gap; [8], LO; [YES], RBS; [kibler6, 9, 2.335, -3.917], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [48.6, 17.0455, 49, 17-32, 83-98, 5K57_A], SIF-Syn; [Fork, DustyDino, Lyell]

CDS 6639 - 6815
  /gene="20"
  /product="gp20"
  /function="hypothetical protein"
  /locus tag="Casablancas_20"
    /note=Original Glimmer call @bp 6639 has strength 8.83; Genemark calls start at 6639
    /note=SSC: 6639-6815 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_ERENYEAGER_20 [Microbacterium phage Erenyeager]],,NCBI, q1:s1 100.0% 9.27691E-32 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.992, -2.5052746077145835, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_ERENYEAGER_20 [Microbacterium phage Erenyeager]],,WMI33895,96.5517,9.27691E-32 SIF-HHPRED:  SIF-Syn: Fork, StevieWelch, DustyDino
    /note=SSC; [6639-6815], CP; [Yes], SCS; [Both], ST; [SS], Blast-Start; [Fork g19, 100, q:1 s:1, 9.27691e-32], Gap; [-1], LO; [NO], RBS; [kibler6, 11, 2.992, -2.505], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [72.9, 36.2069, 11, 12-33, 3-28, 2GJH_A ], SIF-Syn; [Fork g19, Steviewelch g22, DustyDino g23]

CDS 6815 - 6970
  /gene="21"
  /product="gp21"
  /function="hypothetical protein"
  /locus tag="Casablancas_21"
    /note=Original Glimmer call @bp 6815 has strength 0.59
    /note=SSC: 6815-6970 CP: yes SCS: glimmer ST: SS BLAST-Start: [hypothetical protein SEA_ASEGATO_21 [Microbacterium phage ASegato]],,NCBI, q1:s1 100.0% 2.33097E-20 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.87, -4.825272756372522, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_ASEGATO_21 [Microbacterium phage ASegato]],,WNO26014,88.2353,2.33097E-20 SIF-HHPRED:  SIF-Syn: Asegato, Welcome, DustyDino
    /note=SSC; [6815-6970], CP; [Yes], SCS; [Both], ST; [SS], Blast-Start; [Asegato g21, 100, q:1 s:1, 2.33097e-20], Gap; [-1], LO; [NO], RBS; [kibler6, 10, 1.870, -4.825], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [95.4, 41.1765, .028, 27-48, 2-23, PF13353.11 ], SIF-Syn; [Asegato, Welcome, DustyDino]

CDS 6987 - 7151
  /gene="22"
  /product="gp22"
  /function="hypothetical protein"
  /locus tag="Casablancas_22"
    /note=Original Glimmer call @bp 6987 has strength 9.35; Genemark calls start at 7059
    /note=SSC: 6987-7151 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_23 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 6.98379E-30 GAP: 16 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.272, -4.879056974934018, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_23 [Microbacterium phage Lyell] ],,AXC36130,100.0,6.98379E-30 SIF-HHPRED:  SIF-Syn: Lyell, DustyDino, Musetta
    /note=SSC; [6987-7151], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Lyell g23, 100, q:1 s:1, 6.98379e-30], Gap; [16], LO; [YES], RBS; [kibler6, 15, 2.272, -4.879], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [33.2, 79.6296, 30, 4-47, 33-76, 5XXB_N], SIF-Syn; [Lyell, DustyDino, Musetta]

CDS 7151 - 7471
  /gene="23"
  /product="gp23"
  /function="hypothetical protein"
  /locus tag="Casablancas_23"
    /note=Original Glimmer call @bp 7151 has strength 13.38; Genemark calls start at 7151
    /note=SSC: 7151-7471 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_24 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 1.88042E-69 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.975, -2.8298788511194775, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_24 [Microbacterium phage Lyell] ],,AXC36131,99.0566,1.88042E-69 SIF-HHPRED:  SIF-Syn: Lyell, DustyDino, Musetta
    /note=SSC; [7151-7471], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Lyell g24, 100, q:1 s:1, 1.88042e-69], Gap; [-1], LO; [YES], RBS; [kibler6, 13, 2.975, -2.830], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [76.9, 44.3396, 6.4, 3-50, 3-58, SCOP_d3mpka_ ], SIF-Syn; [Lyell, DustyDino, Musetta]

CDS 7473 - 7676
  /gene="24"
  /product="gp24"
  /function="hypothetical protein"
  /locus tag="Casablancas_24"
    /note=Original Glimmer call @bp 7473 has strength 4.95; Genemark calls start at 7473
    /note=SSC: 7473-7676 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_25 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 1.17566E-41 GAP: 1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.646, -4.085313187509542, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_25 [Microbacterium phage Lyell] ],,AXC36132,100.0,1.17566E-41 SIF-HHPRED:  SIF-Syn: Lyell, Fork, StevieWelch
    /note=SSC; [7473-7676], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Lyell g25, 100, q:1 s:1, 1.17566e-41], Gap; [1], LO; [YES], RBS; [kibler6, 15, 2.646, -4.085], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [54.1, 14.9254, 18, 51-61, 86-96, PF15494.11], SIF-Syn; [Lyell, Fork, StevieWelch]

CDS 7673 - 7873
  /gene="25"
  /product="gp25"
  /function="hypothetical protein"
  /locus tag="Casablancas_25"
    /note=Original Glimmer call @bp 7673 has strength 9.46; Genemark calls start at 7673
    /note=SSC: 7673-7873 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_26 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 2.44973E-38 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.816, -2.958041784599676, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_26 [Microbacterium phage Lyell] ],,AXC36133,100.0,2.44973E-38 SIF-HHPRED:  SIF-Syn: Lyell, Fork, ASegato
    /note=SSC; [7673-7873], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Lyell g26, 100, q:1 s:1, 2.44973e-38], Gap; [-4], LO; [NO], RBS; [kibler6, 12, 2.816, -2.958], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [90, 93.9394, 5.9, 1-63, 3-85, 6QL5_R ], SIF-Syn; [Lyell, Fork, ASegato]

tRNA 7940 - 8013
  /gene="26"
  /product="tRNA-Asn(gtt)"
  /locus tag="CASABLANCAS_26"
    /note=tRNA-Asn(gtt)

tRNA 8080 - 8152
  /gene="27"
  /product="tRNA-Gly(tcc)"
  /locus tag="CASABLANCAS_27"
    /note=tRNA-Gly(tcc)

tRNA 8243 - 8316
  /gene="28"
  /product="tRNA-Thr(agt)"
  /locus tag="CASABLANCAS_28"
    /note=tRNA-Thr(agt)

CDS complement (8165 - 8269)
  /gene="29"
  /product="gp29"
  /function="hypothetical protein"
  /locus tag="Casablancas_29"
    /note=Genemark calls start at 8269
    /note=SSC: 8269-8165 CP: yes SCS: genemark ST: SS BLAST-Start:  GAP: 333 bp gap LO: no RBS: Kibler 6, Karlin Medium, 0.95, -7.429226727176891, no F: hypothetical protein SIF-BLAST:  SIF-HHPRED:  SIF-Syn: None
    /note=SSC; [8269-8165], CP; [Yes], SCS; [Both], ST; [SS], Blast-Start; [], Gap; [333], LO; [YES], RBS; [kibler6], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [23.1, 70.5882, 75, 7-31, 230-254, SCOP_d4lcta1], SIF-Syn; []

tRNA 8374 - 8445
  /gene="30"
  /product="tRNA-Tyr(gta)"
  /locus tag="CASABLANCAS_30"
    /note=tRNA-Tyr(gta)

CDS 8603 - 8908
  /gene="31"
  /product="gp31"
  /function="hypothetical protein"
  /locus tag="Casablancas_31"
    /note=Original Glimmer call @bp 8603 has strength 12.81; Genemark calls start at 8603
    /note=SSC: 8603-8908 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_30 [Microbacterium phage Lyell]],,NCBI, q1:s1 100.0% 8.78355E-66 GAP: 333 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.071, -2.2763497933341483, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_30 [Microbacterium phage Lyell]],,AXC36134,100.0,8.78355E-66 SIF-HHPRED:  SIF-Syn: Lyell, Erenyeager, Fork
    /note=SSC; [8603-8908], CP; [Yes], SCS; [both], ST; [], Blast-Start; [Lyell g30, 100, q:1 s:1, 8.78355e-66], Gap; [333], LO; [YES], RBS; [kibler6, 10, 3.071, -2.276], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [73.6, 29.703, 17, 64-94, 8-36, PF13101.11], SIF-Syn; [Lyell, Erenyeager, Fork]

CDS 8905 - 9165
  /gene="32"
  /product="gp32"
  /function="hypothetical protein"
  /locus tag="Casablancas_32"
    /note=Original Glimmer call @bp 8905 has strength 12.09; Genemark calls start at 8905
    /note=SSC: 8905-9165 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_NECROPHOXINUS_33 [Microbacterium phage Necrophoxinus]],,NCBI, q1:s1 100.0% 7.36672E-55 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.016, -5.0425000775956486, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_NECROPHOXINUS_33 [Microbacterium phage Necrophoxinus]],,QWS69396,98.8372,7.36672E-55 SIF-HHPRED:  SIF-Syn: Necrophoxinus, ASegato, Fork
    /note=SSC; [8905-9165], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Necrophoxinus g33, 100, q:1 s:1, 7.36672e-55], Gap; [-4], LO; [NO], RBS; [kibler6, 8, 2.016, -5.043], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [82.6, 40.6977, 5.6, 3-38, 275-311, SCOP_d4qmea4], SIF-Syn; [Necrophoxinus, ASegato, Fork]

CDS 9196 - 9486
  /gene="33"
  /product="gp33"
  /function="hypothetical protein"
  /locus tag="Casablancas_33"
    /note=Original Glimmer call @bp 9196 has strength 12.68; Genemark calls start at 9196
    /note=SSC: 9196-9486 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_ERENYEAGER_32 [Microbacterium phage Erenyeager]],,NCBI, q1:s1 100.0% 3.92185E-63 GAP: 30 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.992, -2.523003374675015, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_ERENYEAGER_32 [Microbacterium phage Erenyeager]],,WMI33903,100.0,3.92185E-63 SIF-HHPRED:  SIF-Syn: Erenyeager, Lyell, DustyDino
    /note=SSC; [9196-9486], CP; [Yes], SCS; [both], ST; [SS], Blast-Start; [Erenyeager g33, 100, q:1 s:1, 3.92185e-63], Gap; [30], LO; [YES], RBS; [kibler6, 9, 2.992, -2.523], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [75.1, 62.5, 54, 9-69, 33-96, PF19671.4], SIF-Syn; [Erenyeager, Lyell, DustyDino]

CDS 9483 - 9710
  /gene="34"
  /product="gp34"
  /function="hypothetical protein"
  /locus tag="Casablancas_34"
    /note=Original Glimmer call @bp 9483 has strength 8.72; Genemark calls start at 9483
    /note=SSC: 9483-9710 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_33 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 2.66409E-46 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.731, -3.9043971090268372, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_33 [Microbacterium phage Lyell] ],,AXC36137,100.0,2.66409E-46 SIF-HHPRED:  SIF-Syn: Lyell, Erenyeager, Necrophoxinus
    /note=SSC; [9483-9710], CP; [Yes], SCS; [both], ST; [], Blast-Start; [Lyell, g33, 100, q:1 s:1, 2.66409e-46], Gap; [-4], LO; [YES], RBS; [kibler6, 15, 2.731, -3.904], F; [NKF], SIF-BLAST; [NKF], SIF-HHPred; [99.9, 84, 3.90e-22, 1-64, 1-62, PF06288.18], SIF-Syn; [Lyell, Erenyeager, Necrophoxinus]

CDS 9707 - 9958
  /gene="35"
  /product="gp35"
  /function="hypothetical protein"
  /locus tag="Casablancas_35"
    /note=Original Glimmer call @bp 9722 has strength 15.29; Genemark calls start at 9722
    /note=SSC: 9707-9958 CP: yes SCS: both-cs ST: NI BLAST-Start: [hypothetical protein SEA_MUSETTA_34 [Microbacterium phage Musetta] ],,NCBI, q1:s1 100.0% 1.76357E-52 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.11, -4.394706008439538, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_MUSETTA_34 [Microbacterium phage Musetta] ],,AXH50190,100.0,1.76357E-52 SIF-HHPRED:  SIF-Syn: NKF, matches with Erenyeager, Musetta, Necrophoxinus
    /note=SSC;[9707,9958], CP;[yes], SCS;[genemark], Blast-Start;[Erenyeager, g34, Phages DB, q1: s1, 100%, 6e-41], Gap;[-4], LO;[yes], RBS;[kibler6, 9, 2.11, -4.395, yes], F;[NKF], SIF-BLAST;[NKF, PhagesDB, Erenyeager, g34, AXH50190, 100, 6e-41], SIF-HHPred;[NKF, HHPRED, 7UQ2_F , 84.3373, 99.8], SIF-Syn;[NKF, Pham: Erenyeager g34, Musetta g34, Necrophoxinus g36]

CDS 10074 - 10328
  /gene="36"
  /product="gp36"
  /function="NrdH-like glutaredoxin"
  /locus tag="Casablancas_36"
    /note=Original Glimmer call @bp 10074 has strength 11.72; Genemark calls start at 10074
    /note=SSC: 10074-10328 CP: yes SCS: both ST: NI BLAST-Start: [NrdH-like glutaredoxin [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 8.66922E-49 GAP: 115 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.992, -2.970161406017234, yes F: NrdH-like glutaredoxin SIF-BLAST: ,,[NrdH-like glutaredoxin [Microbacterium phage DustyDino] ],,URM87438,97.619,8.66922E-49 SIF-HHPRED:  SIF-Syn: NrdH-like glutaredoxin, matches with DustyDino, RunningBrook, Erenyeager
    /note=SSC;[10074,10328], CP;[yes], SCS;[genemark], Blast-Start; [DustyDino, g38, Phages DB, q1: s1, 97.619%, 9e-40], Gap;[115], LO;[no], RBS;[kibler6, 8, 2.992, -2.97, yes], F;[NrdH-like glutaredoxin], SIF-BLAST;[NrdH-like glutaredoxin, PhagesDB, DustyDino, g38, URM87438, 97.619, 9e-40], SIF-HHPred;[NrdH-like glutaredoxin, HHPRED, 8PDD_A, 91.6667, 99.1], SIF-Syn;[NrdH-like glutaredoxin, Pham: DustyDino g38, RunningBrook g36, ErenYeager g35]

CDS 10484 - 11818
  /gene="37"
  /product="gp37"
  /function="phosphoesterase"
  /locus tag="Casablancas_37"
    /note=Original Glimmer call @bp 10484 has strength 9.92; Genemark calls start at 10484
    /note=SSC: 10484-11818 CP: yes SCS: both ST: SS BLAST-Start: [metallophosphoesterase [Microbacterium phage Necrophoxinus]],,NCBI, q1:s1 100.0% 0.0 GAP: 155 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.992, -2.523003374675015, yes F: phosphoesterase SIF-BLAST: ,,[metallophosphoesterase [Microbacterium phage Necrophoxinus]],,QWS69401,100.0,0.0 SIF-HHPRED:  SIF-Syn: phosphoesterase, matches with DustyDino, Erenyeager, and Yuma
    /note=SSC;[10484,11818], CP;[yes], SCS;[genemark], Blast-Start; [DustyDino, g39, Phages DB, q1: s1, 99.7748%, 0], Gap;[155], LO;[yes], RBS;[kibler6, 9, 2.992, -2.523, yes], F;[phosphoesterase], SIF-BLAST;[phosphoesterase, PhagesDB, DustyDino, g39, URM87439, 100, 0], SIF-HHPred;[phosphoesterase, HHPRED, 8BAH_A, 62.1622, 99.6], SIF-Syn;[phosphoesterase, Pham: DustyDino g39, ErenYeager g36, Yuma g35]

CDS 11823 - 12308
  /gene="38"
  /product="gp38"
  /function="HNH endonuclease"
  /locus tag="Casablancas_38"
    /note=Original Glimmer call @bp 11823 has strength 2.27; Genemark calls start at 11823
    /note=SSC: 11823-12308 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_37 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 1.08349E-115 GAP: 4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.414, -4.322809268821859, no F: HNH endonuclease SIF-BLAST: ,,[hypothetical protein SEA_LYELL_37 [Microbacterium phage Lyell] ],,AXC36141,100.0,1.08349E-115 SIF-HHPRED:  SIF-Syn: HNH endonuclease, matches with StevieWelch, Welcome, and Yuma
    /note=SSC;[11823,12308], CP;[yes], SCS;[genemark], Blast-Start; [StevieWelch, g37, Phages DB, q1: s1, 100%, 4e-96], Gap;[4], LO;[yes], RBS;[kibler6, 14, 2.414, -4.323, no], F;[HNH endonuclease], SIF-BLAST;[HNH endonuclease, PhagesDB, StevieWelch, g37, AXC36141, 100, 4e-96], SIF-HHPred;[HNH endonuclease, HHPRED, 3M7K_A, 42.8571, 98.8], SIF-Syn;[phosphoesterase, Pham: StevieWelch g37, Welcome g38, Yuma g36]

CDS 12413 - 12943
  /gene="39"
  /product="gp39"
  /function="hypothetical protein"
  /locus tag="Casablancas_39"
    /note=Original Glimmer call @bp 12413 has strength 15.61; Genemark calls start at 12413
    /note=SSC: 12413-12943 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_38 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 3.59729E-124 GAP: 104 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.039, -4.465043966605421, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_38 [Microbacterium phage Lyell] ],,AXC36142,100.0,3.59729E-124 SIF-HHPRED:  SIF-Syn: NKF, matches DustyDino, Erenyeager, Fork
    /note=SSC;[12413,12943], CP;[yes], SCS;[genemark], Blast-Start;[DustyDino, g41, Phages DB, q1: s1, 100%, 1e-93], Gap;[104], LO;[yes], RBS;[kibler6, 10, 2.039, -4.465, no], F;[NKF], SIF-BLAST;[NKF, PhagesDB, DustyDino, g41, AXC36142, 100, 1e-93], SIF-HHPred;[NKF, HHPRED,	6IN7_B , 23.2955, 93.9], SIF-Syn;[NKF, Pham: DustyDino g41, ErenYeager g38, Fork g34]

CDS 12940 - 14685
  /gene="40"
  /product="gp40"
  /function="terminase"
  /locus tag="Casablancas_40"
    /note=Original Glimmer call @bp 12940 has strength 14.49; Genemark calls start at 12940
    /note=SSC: 12940-14685 CP: yes SCS: both ST: NI BLAST-Start: [terminase [Microbacterium phage Fork] ],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.992, -2.523003374675015, yes F: terminase SIF-BLAST: ,,[terminase [Microbacterium phage Fork] ],,AXC36261,100.0,0.0 SIF-HHPRED:  SIF-Syn: terminase, matches Erenyeager, Fork, Musetta
    /note=SSC;[12940,14685], CP;[yes], SCS;[genemark], Blast-Start;[Erenyeager, g39, Phages DB, q1: s1, 100%, 0], Gap;[-4], LO;[yes], RBS;[kibler6, 9, 2.992, -2.523, yes], F;[terminase], SIF-BLAST;[terminase, PhagesDB, ErenYeager, g39, AXC36261, 100, 0], SIF-HHPred;[terminase, HHPRED, 4IDH_A , 85.0258, 100], SIF-Syn;[terminase, Pham: ErenYeager g39, Fork g35, Musetta g39]

CDS 14747 - 16276
  /gene="41"
  /product="gp41"
  /function="portal protein"
  /locus tag="Casablancas_41"
    /note=Original Glimmer call @bp 14747 has strength 9.27; Genemark calls start at 14747
    /note=SSC: 14747-16276 CP: yes SCS: both ST: NI BLAST-Start: [portal protein [Microbacterium phage Yuma]],,NCBI, q1:s1 100.0% 0.0 GAP: 61 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.559, -4.268618610724321, no F: portal protein SIF-BLAST: ,,[portal protein [Microbacterium phage Yuma]],,UVK62454,100.0,0.0 SIF-HHPRED:  SIF-Syn: portal protein, matches with Yuma, ASegeto, Musetta
    /note=SSC;[14747,16276], CP;[yes], SCS;[genemark], Blast-Start;[Yuma, g39, Phages DB, q1: s1, 100%, 0], Gap;[61], LO;[yes], RBS;[kibler6, 15, 2.559, -4.269, no], F;[portal protein], SIF-BLAST;[portal protein, PhagesDB, Yuma, g39, UVK62454, 100, 0], SIF-HHPred;[portal protein, HHPRED, 8K39_e, 78.9784, 100], SIF-Syn;[portal protein, Pham: Yuma g39, ASegeto g39, Musetta g40]

CDS 16344 - 17285
  /gene="42"
  /product="gp42"
  /function="capsid maturation protease"
  /locus tag="Casablancas_42"
    /note=Original Glimmer call @bp 16344 has strength 6.07; Genemark calls start at 16344
    /note=SSC: 16344-17285 CP: yes SCS: both ST: SS BLAST-Start: [capsid maturation protease [Microbacterium phage Yuma] ],,NCBI, q1:s1 100.0% 0.0 GAP: 67 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.308, -6.018071631562228, no F: capsid maturation protease SIF-BLAST: ,,[capsid maturation protease [Microbacterium phage Yuma] ],,UVK62455,100.0,0.0 SIF-HHPRED:  SIF-Syn: capsid maturation protease, matches with ASegato, Yuma, Erenyeager
    /note=SSC;[16344,17285], CP;[yes], SCS;[genemark], Blast-Start;[ASegato, g40, Phages DB, q1: s1, 99.6805%, 1e-174], Gap;[67], LO;[no], RBS;[kibler6, 10, 1.308, -6.018, yes], F;[capsid maturation protease], SIF-BLAST; [capsid maturation protease, PhagesDB, ASegato, g40, UVK62455, 99.6805, 1e-174], SIF-HHPred;[capsid maturation protease, HHPRED, PF03420.18, 43.4505, 99.5], SIF-Syn;[capsid maturation protease, Pham: ASegato g40, Yuma g40, Erenyeager g41]

CDS 17288 - 17740
  /gene="43"
  /product="gp43"
  /function="hypothetical protein"
  /locus tag="Casablancas_43"
    /note=Original Glimmer call @bp 17288 has strength 5.89; Genemark calls start at 17288
    /note=SSC: 17288-17740 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_NECROPHOXINUS_44 [Microbacterium phage Necrophoxinus] ],,NCBI, q1:s1 100.0% 5.009E-98 GAP: 2 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.731, -3.649124603923531, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_NECROPHOXINUS_44 [Microbacterium phage Necrophoxinus] ],,QWS69407,100.0,5.009E-98 SIF-HHPRED:  SIF-Syn: NKF, matches with ASegato, DustyDino, Erenyeager
    /note=SSC;[17288,17740], CP;[yes], SCS;[genemark], Blast-Start;[ASegato, g41, Phages DB, q1: s1, 100%, 1e-80], Gap;[2], LO;[yes], RBS;[kibler6, 14, 2.731, -3.649, yes], F;[NKF], SIF-BLAST;[NKF, PhagesDB, ASegato, g41, QWS69407, 100, 1e-80], SIF-HHPred;[NKF, HHPRED, PF09956.14 , 88, 99.4], SIF-Syn;[NKF, Pham: ASegato g41, DustyDino g45, Erenyeager g42]

CDS 17733 - 18935
  /gene="44"
  /product="gp44"
  /function="major capsid protein"
  /locus tag="Casablancas_44"
    /note=Original Glimmer call @bp 17733 has strength 10.18; Genemark calls start at 17733
    /note=SSC: 17733-18935 CP: yes SCS: both ST: NI BLAST-Start: [major capsid protein [Microbacterium phage Necrophoxinus] ],,NCBI, q1:s1 100.0% 0.0 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.919, -4.72126161785304, no F: major capsid protein SIF-BLAST: ,,[major capsid protein [Microbacterium phage Necrophoxinus] ],,QWS69408,100.0,0.0 SIF-HHPRED:  SIF-Syn: major capsid protein, matches with Necrophoxinus, Yuma, DustyDino
    /note=SSC;[17733,18935], CP;[yes], SCS;[genemark], Blast-Start;[Necrophoxinus, g45, Phages DB, q1: s1, 100%, 0], Gap;[-8], LO;[yes], RBS;[kibler6, 10, 1.919, -4.721, no], F;[major capsid protein], SIF-BLAST; major capsid protein, PhagesDB, Necrophoxinus, g45, QWS69408, 100, 0], SIF-HHPred;[major capsid protein, HHPRED, 8RQE_pK, 62.25, 99.9], SIF-Syn;[major capsid protein, Pham: Necrophoxinus g45, Yuma g42, DustyDino g46]

CDS 19121 - 19645
  /gene="45"
  /product="gp45"
  /function="hypothetical protein"
  /locus tag="Casablancas_45"
    /note=Original Glimmer call @bp 19121 has strength 6.4; Genemark calls start at 19121
    /note=SSC: 19121-19645 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_ERENYEAGER_44 [Microbacterium phage Erenyeager] ],,NCBI, q1:s1 100.0% 1.75951E-120 GAP: 185 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.501, -4.013206345334601, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_ERENYEAGER_44 [Microbacterium phage Erenyeager] ],,WMI33915,99.4253,1.75951E-120 SIF-HHPRED:  SIF-Syn: NKF, matches with ASegato, Erenyeager, RunningBrook
    /note=SSC;[19121,19645], CP;[yes], SCS;[genemark], Blast-Start;[ASegato, g43, Phages DB, q1: s1, 99.4253%, 1e-99], Gap;[8], LO;[no], RBS;[kibler6, 8, 2.501, -4.013, no], F;[NKF], SIF-BLAST;[NKF, PhagesDB, ASegato, g43, WMI33915, 99.4253, 1e-99], SIF-HHPred;[NKF, HHPRED, PF20449.3, 56.8966, 78.2], SIF-Syn;[NKF, Pham: ASegato g43, Erenyeager g44, RunningBrook g45]

CDS 19645 - 19992
  /gene="46"
  /product="gp46"
  /function="hypothetical protein"
  /locus tag="Casablancas_46"
    /note=Original Glimmer call @bp 19645 has strength 7.94; Genemark calls start at 19645
    /note=SSC: 19645-19992 CP: yes SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_YUMA_44 [Microbacterium phage Yuma] ],,NCBI, q1:s1 100.0% 1.14948E-78 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.448, -4.249702485847477, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_YUMA_44 [Microbacterium phage Yuma] ],,UVK62459,100.0,1.14948E-78 SIF-HHPRED:  SIF-Syn: NKF, matches with Erenyeager, Yuma, ASegato
    /note=SSC;[19645,19992], CP;[yes], SCS;[genemark], Blast-Start;[Erenyeager, g45, Phages DB, q1: s1, 100%, 2e-62], Gap;[-1], LO;[yes], RBS;[kibler6, 14, 2.448, -4.250, yes], F;[NKF], SIF-BLAST;[NKF, PhagesDB, Erenyeager, g45, UVK62459, 100, 2e-62], SIF-HHPred;[NKF, HHPRED, 2C3F_A, 45.2174, 99.2], SIF-Syn;[NKF, Pham: Erenyeager g45, Yuma g44, ASegato g44]

CDS 19992 - 20603
  /gene="47"
  /product="gp47"
  /function="hypothetical protein"
  /locus tag="Casablancas_47"
    /note=Original Glimmer call @bp 19992 has strength 6.49; Genemark calls start at 19992
    /note=SSC: 19992-20603 CP: yes SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_46 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 2.12509E-136 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.71, -3.103280908771174, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_46 [Microbacterium phage Lyell] ],,AXC36150,100.0,2.12509E-136 SIF-HHPRED:  SIF-Syn: NKF, matches with DustyDino, Fork, Lyell
    /note=SSC;[19992,20603], CP;[yes], SCS;[genemark], Blast-Start;[DustyDino, g49, Phages DB, q1: s1, 100%, 1e-108], Gap;[-1], LO;[no], RBS;[kibler6, 11, 2.71, -3.103, yes], F;[NKF], SIF-BLAST;[NKF, PhagesDB, DustyDino, g49, AXC36150, 100, 1e-108], SIF-HHPred;[NKF, HHPRED, 5NXF_C, 16.2562, 76.8], SIF-Syn;[NKF, Pham: DustyDino g49, Fork g42, Lyell g46]

CDS 20600 - 22360
  /gene="48"
  /product="gp48"
  /function="glycoside hydrolase"
  /locus tag="Casablancas_48"
    /note=Original Glimmer call @bp 20600 has strength 6.4; Genemark calls start at 20606
    /note=SSC: 20600-22360 CP: yes SCS: both-gl ST: NI BLAST-Start: [hydrolase [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.442, -4.137199935798589, no F: glycoside hydrolase SIF-BLAST: ,,[hydrolase [Microbacterium phage Lyell] ],,AXC36151,99.8294,0.0 SIF-HHPRED:  SIF-Syn: glycoside hydrolase, matches with Erenyeager, Necrophoxinus, and Yuma
    /note=SSC;[20600, 22360], CP;[yes], SCS;[genemark], Blast-Start;[Erenyeager, g47, Phages DB, q1: s1, 99.6587%, 0], Gap;[-4], LO;[yes], RBS;[kibler6, 8, 2.442, -4.137, yes], F;[glycoside hydrolase], SIF-BLAST; glycoside hydrolase, PhagesDB, Erenyeager, g47, AXC36151, 100, 0], SIF-HHPred;glycoside hydrolase, HHPRED, 5LW3_A, 52.901, 99.8], SIF-Syn;[glycoside hydrolase, Pham: Erenyeager g47, Necrophoxinus g49, Yuma g46]

CDS 22472 - 22921
  /gene="49"
  /product="gp49"
  /function="head-to-tail stopper"
  /locus tag="Casablancas_49"
    /note=Original Glimmer call @bp 22472 has strength 7.84; Genemark calls start at 22472
    /note=SSC: 22472-22921 CP: yes SCS: both ST: NI BLAST-Start: [head-to-tail stopper [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 9.31328E-106 GAP: 111 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.148, -2.1123791669543204, yes F: head-to-tail stopper SIF-BLAST: ,,[head-to-tail stopper [Microbacterium phage Lyell] ],,AXC36152,100.0,9.31328E-106 SIF-HHPRED:  SIF-Syn: head-to-tail stopper, matches with Erenyeager, Fork, Lyell
    /note=SSC;[22472, 22921], CP;[yes], SCS;[genemark], Blast-Start;[Erenyeager, g48, Phages DB, q1: s1, 100%, 4e-83], Gap;[111], LO;[yes], RBS;[kibler6, 10, 3.148, -2.112, yes], F;[head-to-tail stopper], SIF-BLAST; head-to-tail stopper, PhagesDB, Erenyeager, g48, AXC36152, 100, 4e-83], SIF-HHPred;head-to-tail stopper, HHPRED, PF19586.4, 	79.8658, 99.9], SIF-Syn;[head-to-tail stopper, Pham: Erenyeager g48, Fork g44, Lyell g48]

CDS 22914 - 23363
  /gene="50"
  /product="gp50"
  /function="hypothetical protein"
  /locus tag="Casablancas_50"
    /note=Original Glimmer call @bp 22914 has strength 7.03; Genemark calls start at 22914
    /note=SSC: 22914-23363 CP: yes SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_FORK_45 [Microbacterium phage Fork] ],,NCBI, q1:s1 100.0% 1.57124E-102 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.073, -4.534089041695007, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_FORK_45 [Microbacterium phage Fork] ],,AXC36271,100.0,1.57124E-102 SIF-HHPRED:  SIF-Syn: NKF, matches with DustyDino, Erenyeager, Fork
    /note=SSC;[22914, 23363], CP;[yes], SCS;[genemark], Blast-Start;[DustyDino, g52, Phages DB, q1: s1, 100%, 5e-81], Gap;[-8], LO;[yes], RBS;[kibler6, 12, 2.073, -4.534, no], F;[NKF], SIF-BLAST;[NKF, PhagesDB, DustyDino, g52, AXC36271, 100, 5e-81], SIF-HHPred;[NKF, HHPRED, PF11114.13, 50.3356, 99], SIF-Syn;[NKF, Pham: DustyDino g52, Erenyeager g49, Fork g45]

CDS 23363 - 23830
  /gene="51"
  /product="gp51"
  /function="tail terminator"
  /locus tag="Casablancas_51"
    /note=Original Glimmer call @bp 23363 has strength 11.75; Genemark calls start at 23363
    /note=SSC: 23363-23830 CP: yes SCS: both ST: NI BLAST-Start: [tail terminator [Microbacterium phage ASegato]],,NCBI, q1:s1 100.0% 5.72932E-109 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.897, -2.6453814847322845, yes F: tail terminator SIF-BLAST: ,,[tail terminator [Microbacterium phage ASegato]],,WNO25941,96.2733,5.72932E-109 SIF-HHPRED:  SIF-Syn: tail terminator, matches with ASegato , DustyDino, Erenyeager
    /note=SSC;[23363, 23830], CP;[yes], SCS;[genemark], Blast-Start;[ASegato, g49, Phages DB, q1: s1, 96.2733%, 1e-86], Gap;[-1], LO;[yes], RBS;[kibler6, 10, 2.897, -2.645, yes], F;[tail terminator], SIF-BLAST; tail terminator, PhagesDB, ASegato, g48, WNO25941, 96.2733, 1e-86], SIF-HHPred;tail terminator, HHPRED, SCOP_d2gjva1, 95.4839, 97.6], SIF-Syn;[tail terminator, Pham: ASegato g49, DustyDino g53, Erenyeager g50]

CDS 23854 - 24069
  /gene="52"
  /product="gp52"
  /function="hypothetical protein"
  /locus tag="Casablancas_52"
    /note=Original Glimmer call @bp 23854 has strength 10.27; Genemark calls start at 23854
    /note=SSC: 23854-24069 CP: yes SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_FORK_47 [Microbacterium phage Fork] ],,NCBI, q1:s1 100.0% 6.95398E-43 GAP: 23 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.284, -4.853679090582491, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_FORK_47 [Microbacterium phage Fork] ],,AXC36273,100.0,6.95398E-43 SIF-HHPRED:  SIF-Syn: NKF, matches with ASegato, DustyDino, Erenyeager
    /note=SSC;[23854, 24069], CP;[yes], SCS;[genemark], Blast-Start;[ASegato, g50, Phages DB, q1: s1, 100%, 1e-35], Gap;[23], LO;[yes], RBS;[kibler6, 15, 2.284, -4.854, yes], F;[NKF], SIF-BLAST;[NKF, PhagesDB, ASegato, g50, AXC36273, 100, 1e-35], SIF-HHPred;[NKF, HHPRED, 6JSX_B, 64.5, 99], SIF-Syn;[NKF, Pham: ASegato g50, DustyDino g54, Erenyeager g51]

CDS 24069 - 24629
  /gene="53"
  /product="gp53"
  /function="hypothetical protein"
  /locus tag="Casablancas_53"
    /note=Original Glimmer call @bp 24069 has strength 10.18; Genemark calls start at 24069
    /note=SSC: 24069-24629 CP: yes SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_FORK_48 [Microbacterium phage Fork] ],,NCBI, q1:s1 100.0% 1.70886E-132 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.517, -3.5316035464369326, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_FORK_48 [Microbacterium phage Fork] ],,AXC36274,100.0,1.70886E-132 SIF-HHPRED:  SIF-Syn: NKF, matches with Erenyeager, Fork, and Yuma
    /note=SSC;[24069, 24629], CP;[yes], SCS;[genemark], Blast-Start;[Erenyeager, g52, Phages DB, q1: s1, 100%, 1e-105], Gap;[-1], LO;[yes], RBS;[kibler6, 9, 2.517, -3.532, yes], F;[NKF], SIF-BLAST;[NKF, PhagesDB, Erenyeager, g52, AXC36274, 100, 1e-105], SIF-HHPred;[NKF, HHPRED, 8QHS_F, 98.9247, 90.3], SIF-Syn;[NKF, Pham: Erenyeager g52, Fork g48, Yuma g51]

CDS 24646 - 25431
  /gene="54"
  /product="gp54"
  /function="major tail protein"
  /locus tag="Casablancas_54"
    /note=Original Glimmer call @bp 24646 has strength 8.66; Genemark calls start at 24646
    /note=SSC: 24646-25431 CP: yes SCS: both ST: NI BLAST-Start: [major tail protein [Microbacterium phage Fork] ],,NCBI, q1:s1 100.0% 0.0 GAP: 16 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.992, -2.5052746077145835, yes F: major tail protein SIF-BLAST: ,,[major tail protein [Microbacterium phage Fork] ],,AXC36275,100.0,0.0 SIF-HHPRED:  SIF-Syn: major tail protein, matches with Erenyeager, Fork, StevieWelch
    /note=SSC;[24646, 25431], CP;[yes], SCS;[genemark], Blast-Start;[Erenyeager, g53, Phages DB, q1: s1, 100%, 1e-146], Gap;[16], LO;[yes], RBS;[kibler6, 11, 2.992, -2.505, yes], F;[major tail protein], SIF-BLAST; major tail protein, PhagesDB, Erenyeager, g53, AXC36275, 100, 1e-146], SIF-HHPred; major tail protein, HHPRED, 8K36_J, 99.6169, 90.3], SIF-Syn;[major tail protein, Pham: Erenyeager g53, Fork g49, StevieWelch g53]

CDS 25496 - 26107
  /gene="55"
  /product="gp55"
  /function="tail assembly chaperone"
  /locus tag="Casablancas_55"
    /note=Original Glimmer call @bp 25496 has strength 11.71; Genemark calls start at 25496
    /note=SSC: 25496-26107 CP: yes SCS: both ST: NI BLAST-Start: [tail assembly chaperone [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 2.73101E-144 GAP: 64 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.22, -4.989254565642423, no F: tail assembly chaperone SIF-BLAST: ,,[tail assembly chaperone [Microbacterium phage Lyell] ],,AXC36158,100.0,2.73101E-144 SIF-HHPRED:  SIF-Syn: tail assembly chaperone, matches with Erenyeager, Lyell, DustyDino
    /note=SSC;[25496, 26107], CP;[yes], SCS;[genemark], Blast-Start;[Erenyeager, g54, Phages DB, q1: s1, 100%, 1e-111], Gap;[64], LO;[no], RBS;[kibler6, 15, 2.22, -4.989, no], F;[tail assembly chaperone], SIF-BLAST; tail assembly chaperone, PhagesDB, Erenyeager, g54, AXC36158, 100, 1e-111], SIF-HHPred; tail assembly chaperone, HHPRED, 2OB9_B, 52.2167, 92.8], SIF-Syn;[tail assembly chaperone, Pham: Erenyeager g54, Lyell g54, DustyDino g57]

CDS 26128 - 26643
  /gene="56"
  /product="gp56"
  /function="tail assembly chaperone"
  /locus tag="Casablancas_56"
    /note=Original Glimmer call @bp 26128 has strength 5.4; Genemark calls start at 26128
    /note=SSC: 26128-26643 CP: yes SCS: both ST: NI BLAST-Start: [tail assembly chaperone [Microbacterium phage Musetta]],,NCBI, q1:s212 100.0% 3.95631E-118 GAP: 20 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.077, -7.608323496372297, no F: tail assembly chaperone SIF-BLAST: ,,[tail assembly chaperone [Microbacterium phage Musetta]],,AXH50211,44.7644,3.95631E-118 SIF-HHPRED:  SIF-Syn: tail assembly chaperone, matches with ASegato, Lyell, Musetta
    /note=SSC;[26128, 26643], CP;[yes], SCS;[genemark], Blast-Start;[ASegato, g54, Phages DB, q1: s1, 44.7644%, 3e-95], Gap;[20], LO;[yes], RBS;[kibler6, 16, 1.077, -7.608, no], F;[tail assembly chaperone], SIF-BLAST; tail assembly chaperone, PhagesDB, ASegato, g54, AXH50211, 100, 3e-95], SIF-HHPred; tail assembly chaperone, HHPRED, 6HCZ_A, 11.1111, 86.4], SIF-Syn;[tail assembly chaperone, Pham: ASegato g54, Lyell g55, Musetta g55]

CDS 26667 - 30173
  /gene="57"
  /product="gp57"
  /function="tape measure protein"
  /locus tag="Casablancas_57"
    /note=Original Glimmer call @bp 26667 has strength 7.15; Genemark calls start at 26667
    /note=SSC: 26667-30173 CP: yes SCS: both ST: NI BLAST-Start: [tape measure protein [Microbacterium phage Necrophoxinus] ],,NCBI, q1:s1 100.0% 0.0 GAP: 23 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.159, -2.1518296047551457, yes F: tape measure protein SIF-BLAST: ,,[tape measure protein [Microbacterium phage Necrophoxinus] ],,QWS69421,100.0,0.0 SIF-HHPRED:  SIF-Syn: tape measure protein, matches with Necrophoxinus, Yuma, DustyDino
    /note=SSC;[26667, 30173], CP;[yes], SCS;[genemark], Blast-Start;[Necrophoxinus, g58, Phages DB, q1: s1, 99.9144%, 0], Gap;[23], LO;[yes], RBS;[kibler6, 11, 3.159, -2.152, yes], F;[tape measure protein], SIF-BLAST; tape measure protein, PhagesDB, Necrophoxinus, g58, QWS69421, 100, 0], SIF-HHPred; tape measure protein, HHPRED, 8VJH_Q, 3.08219, 99.8], SIF-Syn;[tape measure protein, Pham: Necrophoxinus g58, Yuma g55, DustyDino g59]

CDS 30173 - 31051
  /gene="58"
  /product="gp58"
  /function="minor tail protein"
  /locus tag="Casablancas_58"
    /note=Original Glimmer call @bp 30173 has strength 3.97; Genemark calls start at 30173
    /note=SSC: 30173-31051 CP: yes SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_57 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 0.0 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.415, -3.8079208184165134, no F: minor tail protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_57 [Microbacterium phage Lyell] ],,AXC36161,99.6575,0.0 SIF-HHPRED:  SIF-Syn: minor tail protein, matches with ASegato and DustyDino
    /note=SSC;[30173, 31051], CP;[yes], SCS;[genemark], Blast-Start;[ASegato , g56, Phages DB, q1: s1, 99.6575%, 1e-173], Gap;[-1], LO;[yes], RBS;[kibler6, 12, 2.415, -3.808, yes], F;[minor tail protein], SIF-BLAST; minor tail protein, PhagesDB, ASegato , g56, AXC36161, 100, 1e-173], SIF-HHPred; minor tail protein, HHPRED, PF21425.2, 22.6027, 95.9], SIF-Syn;[minor tail protein, Pham: ASegato g56, DustyDino g60]

CDS 31075 - 32667
  /gene="59"
  /product="gp59"
  /function="minor tail protein"
  /locus tag="Casablancas_59"
    /note=Original Glimmer call @bp 31075 has strength 6.22; Genemark calls start at 31042
    /note=SSC: 31075-32667 CP: yes SCS: both-gl ST: NI BLAST-Start: [minor tail protein [Microbacterium phage Musetta] ],,NCBI, q1:s12 100.0% 0.0 GAP: 23 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.678, -5.3719741700337265, no F: minor tail protein SIF-BLAST: ,,[minor tail protein [Microbacterium phage Musetta] ],,AXH50214,97.9667,0.0 SIF-HHPRED:  SIF-Syn: minor tail protein, matches with DustyDino, Erenyeager, Musetta
    /note=SSC;[31075, 32667], CP;[yes], SCS;[genemark], Blast-Start;[DustyDino, g61, Phages DB, q1: s1, 97.7819%, 0], Gap;[23], LO;[no], RBS;[kibler6, 12, 1.678, -5.372, no], F;[minor tail protein], SIF-BLAST; minor tail protein, PhagesDB, DustyDino, g58, AXH50214, 100, 0], SIF-HHPred; minor tail protein, HHPRED, 6U5H_C, 36.0377, 97.9], SIF-Syn;[minor tail protein, Pham: DustyDino g61, Erenyeager g58, Musetta g58]

CDS 32664 - 33236
  /gene="60"
  /product="gp60"
  /function="hypothetical protein"
  /locus tag="Casablancas_60"
    /note=Original Glimmer call @bp 33006 has strength 4.03; Genemark calls start at 32760
    /note=SSC: 32664-33236 CP: yes SCS: both-cs ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_59 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 1.48243E-134 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.49, -3.588526034455651, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_59 [Microbacterium phage Lyell] ],,AXC36163,100.0,1.48243E-134 SIF-HHPRED:  SIF-Syn: NKF, matches with ASegato, DustyDino, Erenyeager
    /note=SSC;[32664, 33236], CP;[yes], SCS;[genemark], Blast-Start;[ASegato, g58, Phages DB, q1: s1, 100%, 1e-105], Gap;[-4], LO;[yes], RBS;[kibler6, 9, 2.49, -3.589, yes], F;[NKF], SIF-BLAST;[NKF, PhagesDB, ASegato, g58, AXC36163, 100, 1e-105], SIF-HHPred;[NKF, HHPRED, 1WCK_A, 52.6316, 81.5], SIF-Syn;[NKF, Pham: ASegato g58, DustyDino g62, Erenyeager g59]

CDS 33233 - 33850
  /gene="61"
  /product="gp61"
  /function="hypothetical protein"
  /locus tag="Casablancas_61"
    /note=Original Glimmer call @bp 33233 has strength 10.16; Genemark calls start at 33233
    /note=SSC: 33233-33850 CP: yes SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_60 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 3.47045E-145 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.176, -4.236379132697792, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_60 [Microbacterium phage Lyell] ],,AXC36164,100.0,3.47045E-145 SIF-HHPRED:  SIF-Syn: NKF, matches with ASegato, DustyDino, Fork
    /note=SSC;[33233, 33850], CP;[yes], SCS;[genemark], Blast-Start;[ASegato, g59, Phages DB, q1: s1, 100%, 1e-115], Gap;[-4], LO;[yes], RBS;[kibler6, 11, 2.176, -4.236, yes], F;[NKF], SIF-BLAST;[NKF, PhagesDB, ASegato, g59, AXC36164, 100, 1e-115], SIF-HHPred;[NKF, HHPRED, 5FCE_A, 13.6585, 59.9], SIF-Syn;[NKF, Pham: ASegato g59, DustyDino g63, Fork g56]

CDS 33888 - 34454
  /gene="62"
  /product="gp62"
  /function="hypothetical protein"
  /locus tag="Casablancas_62"
    /note=Original Glimmer call @bp 33888 has strength 4.94; Genemark calls start at 33888
    /note=SSC: 33888-34454 CP: yes SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_61 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 9.23758E-133 GAP: 37 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.346, -3.8137921535956054, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_61 [Microbacterium phage Lyell] ],,AXC36165,100.0,9.23758E-133 SIF-HHPRED:  SIF-Syn: NKF, matches with ASegato, DustyDino, Erenyeager
    /note=SSC;[33888, 34454], CP;[yes], SCS;[genemark], Blast-Start;[ASegato, g60, Phages DB, q1: s1, 100%, 1e-107], Gap;[37], LO;[yes], RBS;[kibler6, 10, 2.346, -3.814, no], F;[NKF], SIF-BLAST;[NKF, PhagesDB, ASegato, g60, AXC36165, 100, 1e-107], SIF-HHPred;[NKF, HHPRED, 6R5W_B, 50.5319, 85.7], SIF-Syn;[NKF, Pham: ASegato g60, DustyDino g64, Erenyeager g61]

CDS 34451 - 35383
  /gene="63"
  /product="gp63"
  /function="endolysin"
  /locus tag="Casablancas_63"
    /note=Original Glimmer call @bp 34451 has strength 6.74; Genemark calls start at 34451
    /note=SSC: 34451-35383 CP: yes SCS: both ST: NI BLAST-Start: [lysin A [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 0.985, -6.764086808685657, no F: endolysin SIF-BLAST: ,,[lysin A [Microbacterium phage Lyell] ],,AXC36166,100.0,0.0 SIF-HHPRED:  SIF-Syn: endolysin, matches with ASegato, DustyDino, Erenyeager
    /note=SSC;[34451, 35383], CP;[yes], SCS;[genemark], Blast-Start;[ASegato, g61, Phages DB, q1: s1, 100%, 0], Gap;[-4], LO;[yes], RBS;[kibler6, 11, 0.985, -6.764, no], F;[endolysin], SIF-BLAST;[endolysin, PhagesDB, ASegato, g61, AXC36166, 100, 0], SIF-HHPred;[endolysin, HHPRED, 4MUQ_A, 41.2903, 99.3], SIF-Syn;[endolysin, Pham: ASegato g61, DustyDino g65, Erenyeager g62]

CDS 35383 - 35661
  /gene="64"
  /product="gp64"
  /function="hypothetical protein"
  /locus tag="Casablancas_64"
    /note=Original Glimmer call @bp 35383 has strength 6.43; Genemark calls start at 35383
    /note=SSC: 35383-35661 CP: yes SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_63 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 6.76847E-59 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 0.819, -7.134041170973121, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_63 [Microbacterium phage Lyell] ],,AXC36167,100.0,6.76847E-59 SIF-HHPRED:  SIF-Syn: NKF, matches with ASegato, Erenyeager, and Fork
    /note=SSC;[35383, 35661], CP;[yes], SCS;[genemark], Blast-Start;[ASegato, g62, Phages DB, q1: s1, 100%, 2e-46], Gap;[-1], LO;[yes], RBS;[kibler6, 9, 0.819, -7.134, no], F;[NKF], SIF-BLAST;[NKF, PhagesDB, ASegato, g62, AXC36167, 100, 2e-46], SIF-HHPred;[NKF, HHPRED, PF07439.16, 54.3478, 98.1], SIF-Syn;[NKF, Pham: ASegato g62, Erenyeager g63, Fork g59]

CDS 35673 - 35912
  /gene="65"
  /product="gp65"
  /function="hypothetical protein"
  /locus tag="Casablancas_65"
    /note=Original Glimmer call @bp 35673 has strength 10.09; Genemark calls start at 35673
    /note=SSC: 35673-35912 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_64 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 1.56501E-47 GAP: 11 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.233, -1.993391246735709, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_64 [Microbacterium phage Lyell] ],,AXC36168,100.0,1.56501E-47 SIF-HHPRED:  SIF-Syn: NKF, Matches with ASegato and Lyell
    /note=SSC [35673-35912], CP: [Yes], SCS: [Glimmer], ST: [SS], Blast-Start: [ASegato, 63, 2e-38], Gap: [11], LO: [Yes], RBS: [Kibler9, Karlin Medium, 3.233, -1.993, Yes] F: NKF, SIF-blastp: [NKF, AXC36168, Lyell, 64, 1.56e-47], SIF-HHPRED: [ABC transporter, 6FNP_A, 72.8, 52], Syn: [NKF, Matches with ASegato and Lyell]

CDS complement (35964 - 36389)
  /gene="66"
  /product="gp66"
  /function="RuvC-like resolvase"
  /locus tag="Casablancas_66"
    /note=Original Glimmer call @bp 36389 has strength 8.31; Genemark calls start at 36410
    /note=SSC: 36389-35964 CP: no SCS: both-gl ST: NI BLAST-Start: [RuvC-like resolvase [Microbacterium phage Yuma] ],,NCBI, q1:s8 100.0% 3.98067E-98 GAP: 7 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.798, -5.804487268900638, no F: RuvC-like resolvase SIF-BLAST: ,,[RuvC-like resolvase [Microbacterium phage Yuma] ],,UVK62479,95.2703,3.98067E-98 SIF-HHPRED:  SIF-Syn: RuvC-Like Resolvase, matches with Welcome, Yuma, Fork
    /note=SSC: [35964-36389], CP: [Yes], SCS: [Both], Blast-Start: [Welcome, 66,NCBI Blastp,1:1, 100%,7e-98] , Gap: [?], LO: [No], F: [Ruvc-like resolvase], SIF: [RuvC-like resolvase,Phagesdb Blast, Yuma, 64, 100%, 7e-77] [RuvC-like resolvase, matches with Welcome, Yuma, Fork]

CDS complement (36397 - 36978)
  /gene="67"
  /product="gp67"
  /function="hypothetical protein"
  /locus tag="Casablancas_67"
    /note=Original Glimmer call @bp 36978 has strength 15.31; Genemark calls start at 36978
    /note=SSC: 36978-36397 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_YUMA_65 [Microbacterium phage Yuma]],,NCBI, q1:s1 100.0% 2.25925E-140 GAP: 25 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.071, -2.627458653341447, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_YUMA_65 [Microbacterium phage Yuma]],,UVK62480,100.0,2.25925E-140 SIF-HHPRED:  SIF-Syn: Unknown function, matches with Yuma and Necrophoxinus
    /note=SSC: [36397-36978], CP: [Yes], SCS: [Glimmer],Blast-Start: [Yuma, 65, NCBI Blastp, 1:1, 100%, 2e-140] , Gap: [29], LO: [No], RBS: F: [Unknown], SIF: [PhagesDB Blast, Yuma, 65, 1e-100] [Unknown Function, Matches with Yuma and Necrophoxinus]

CDS complement (37004 - 37378)
  /gene="68"
  /product="gp68"
  /function="hypothetical protein"
  /locus tag="Casablancas_68"
    /note=Original Glimmer call @bp 37378 has strength 9.43; Genemark calls start at 37378
    /note=SSC: 37378-37004 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_YUMA_66 [Microbacterium phage Yuma] ],,NCBI, q1:s1 100.0% 2.09086E-84 GAP: -11 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.233, -2.838489286749966, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_YUMA_66 [Microbacterium phage Yuma] ],,UVK62481,100.0,2.09086E-84 SIF-HHPRED:  SIF-Syn: [Unknown Function, Matches with Yuma]
    /note=SSC: [37378-37004], CP: [Yes], SCS: [Glimmer],Blast-Start: [Asegato, 66, Phagesdb, 1e-69]  Gap: [-11], LO: [Yes], RBS:[] F: [NKF], SIF: [NKF, NCBI blastp, Yuma, 66, 100%, 2.09e-84, ] Syn: [Unknown Function, Matches with Yuma]

CDS complement (37368 - 37577)
  /gene="69"
  /product="gp69"
  /function="hypothetical protein"
  /locus tag="Casablancas_69"
    /note=Original Glimmer call @bp 37577 has strength 8.11; Genemark calls start at 37577
    /note=SSC: 37577-37368 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_DUSTYDINO_71 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 2.84291E-42 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.698, -5.269767271831238, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_71 [Microbacterium phage DustyDino] ],,URM87471,100.0,2.84291E-42 SIF-HHPRED:  SIF-Syn: [Unknown Function, Matches with Dusty Dino]
    /note=SSC: [37368-37577], CP: [Yes], SCS: [Glimmer],Blast-Start: [Dusty Dino, 71, Phagesdb, 3e-36]  Gap: [-4], LO: [No], RBS:[] F: [NKF], SIF: [NKF, NCBI blastp, Dusty Dino, 71, URM87471, 100%, 2.84e-42 , ] Syn: [Unknown Function, Matches with Dusty Dino]

CDS complement (37574 - 37972)
  /gene="70"
  /product="gp70"
  /function="hypothetical protein"
  /locus tag="Casablancas_70"
    /note=Original Glimmer call @bp 37972 has strength 12.34; Genemark calls start at 37987
    /note=SSC: 37972-37574 CP: no SCS: both-gl ST: NI BLAST-Start: [hypothetical protein SEA_YUMA_68 [Microbacterium phage Yuma]],,NCBI, q1:s1 100.0% 4.15628E-92 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.314, -4.232316027061245, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_YUMA_68 [Microbacterium phage Yuma]],,UVK62483,100.0,4.15628E-92 SIF-HHPRED:  SIF-Syn: [Unknown Function, Matches with Yuma]
    /note=SSC: [37574-37972], CP: [Yes], SCS: [Both], Blast-Start: [Yuma, 68, Phagesdb, 4e-73]  Gap: [-4], LO: [No], RBS:[] F: [NKF], SIF: [NKF, NCBI blastp, Yuma, 68, 100%, 4.15e-92 ] Syn: [Unknown Function, Matches with Yuma]

CDS complement (37969 - 40500)
  /gene="71"
  /product="gp71"
  /function="DNA primase/polymerase"
  /locus tag="Casablancas_71"
    /note=Original Glimmer call @bp 40500 has strength 8.86; Genemark calls start at 40500
    /note=SSC: 40500-37969 CP: no SCS: both ST: NI BLAST-Start: [DNA primase/polymerase [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 0.0 GAP: 110 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.071, -3.326428657677466, yes F: DNA primase/polymerase SIF-BLAST: ,,[DNA primase/polymerase [Microbacterium phage DustyDino] ],,URM87473,100.0,0.0 SIF-HHPRED:  SIF-Syn: DNA primase/polymerase, Matches with Dusty Dino, and Yuma
    /note=SSC: [37969-40500], CP: [Yes], SCS: [Glimmer], Blast-Start: [Dusty Dino, 73, Phagesdb, 0] Gap: [110], LO: [No], RBS:[] F: [NKF], SIF: [NKF, NCBI blastp, Dusty Dino, 73, 100%, 0] Syn: [DNA primase/polymerase], Matches with Dusty Dino, and Yuma]

tRNA complement (40527 - 40601)
  /gene="72"
  /product="tRNA-Stop(cta)"
  /locus tag="CASABLANCAS_72"
    /note=tRNA-Stop(cta)

CDS complement (40611 - 40763)
  /gene="73"
  /product="gp73"
  /function="hypothetical protein"
  /locus tag="Casablancas_73"
    /note=Original Glimmer call @bp 40763 has strength 2.13
    /note=SSC: 40763-40611 CP: no SCS: glimmer ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_71 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 4.42644E-28 GAP: 65 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.039, -4.992814376408644, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_71 [Microbacterium phage Lyell] ],,AXC36175,100.0,4.42644E-28 SIF-HHPRED:  SIF-Syn: Unknown Function, Matches with Dusty Dino, and Lyell, and Necrophoxinus
    /note=SSC: [40611-40763], CP: [Yes], SCS: [Both], Blast-Start: [Dusty Dino, 75, Phagesdb, 9e-24] Gap: [65], LO: [Yes], RBS:[] F: [NKF], SIF: [NKF, NCBI blastp, Lyell, 71, 100%, 4.4e-28] Syn: [Unknown Function, Matches with Dusty Dino, and Lyell, and Necrophoxinus]

CDS complement (40829 - 41446)
  /gene="74"
  /product="gp74"
  /function="hypothetical protein"
  /locus tag="Casablancas_74"
    /note=Original Glimmer call @bp 41446 has strength 13.03; Genemark calls start at 41446
    /note=SSC: 41446-40829 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_72 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 2.94377E-145 GAP: 13 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.992, -2.970161406017234, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_72 [Microbacterium phage Lyell] ],,AXC36176,100.0,2.94377E-145 SIF-HHPRED:  SIF-Syn: [Unknown Function, Matches with Lyell and Fork]
    /note=SSC: [40829-41446], CP: [Yes], SCS: [Glimmer], Blast-Start: [Fork, 68, Phagesdb, 1e-117] Gap: [13], LO: [No], RBS:[Kibler9, Karlin Medium, 2.992, -2.972, yes] F: [NKF], SIF: [NKF, NCBI blastp, Lyell, 72, 2.94e-145] Syn: [Unknown Function, Matches with Lyell, Fork]

CDS complement (41460 - 41645)
  /gene="75"
  /product="gp75"
  /function="hypothetical protein"
  /locus tag="Casablancas_75"
    /note=Original Glimmer call @bp 41645 has strength 8.06; Genemark calls start at 41645
    /note=SSC: 41645-41460 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_73 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 1.14366E-35 GAP: -23 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.745, -3.0478325568523097, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_73 [Microbacterium phage Lyell] ],,AXC36177,100.0,1.14366E-35 SIF-HHPRED:  SIF-Syn: [NKF, Matches with Lyell, Asegato, Necrophoxinus]
    /note=SSC: [41460-41645], CP: [Yes], SCS: [Glimmer], Blast-Start: [Asegato, 72, Phagesdb,4e-28] Gap: [-23], LO: [No], RBS:[Kibler9, Karlin Medium, 2.745, -3.048, yes] F: [NKF], SIF: [NKF, NCBI blastp, Lyell, 72, 1.14e-35] Syn: [NKF, Matches with Lyell, Asegato, Necrophoxinus]

CDS complement (41623 - 42483)
  /gene="76"
  /product="gp76"
  /function="exonuclease"
  /locus tag="Casablancas_76"
    /note=Original Glimmer call @bp 42483 has strength 9.85; Genemark calls start at 42483
    /note=SSC: 42483-41623 CP: no SCS: both ST: NI BLAST-Start: [Cas4 family exonuclease [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 0.0 GAP: 2 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.18, -4.308385737595809, no F: exonuclease SIF-BLAST: ,,[Cas4 family exonuclease [Microbacterium phage DustyDino] ],,URM87477,100.0,0.0 SIF-HHPRED:  SIF-Syn: Exonuclease, Matches with Lyell, Asegato, Necrophoxinus
    /note=SSC: [41623-42483], CP: [Yes], SCS: [Glimmer], Blast-Start: [Dusty Dino, 78, Phagesdb,1e-169] Gap: [2], LO: [Yes], RBS:[Kibler9, Karlin Medium, 2.18, -4.308, No] F: [Exonuclease], SIF: [Exonuclease, NCBI blastp, Lyell, 72, 1.14e-35] Syn: [Exonuclease, Matches with Lyell, Asegato, Necrophoxinus]

CDS complement (42486 - 43190)
  /gene="77"
  /product="gp77"
  /function="ERF family DNA pairing protein"
  /locus tag="Casablancas_77"
    /note=Original Glimmer call @bp 43190 has strength 15.0; Genemark calls start at 43190
    /note=SSC: 43190-42486 CP: no SCS: both ST: NI BLAST-Start: [ERF family ssDNA binding protein [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 1.79965E-168 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.992, -2.583959800616441, yes F: ERF family DNA pairing protein SIF-BLAST: ,,[ERF family ssDNA binding protein [Microbacterium phage DustyDino] ],,URM87478,100.0,1.79965E-168 SIF-HHPRED:  SIF-Syn: ERF family DNA pairing protein, Matches with Dusty Dino, and RunningBrook
    /note=SSC: [42486-43190], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [Dusty Dino,79,Phagesdb,1e-129] Gap: [-4], LO: [Yes], RBS:[Kibler9, Karlin Medium, 2.992,-2.584, Yes] F: [ERF family ssDNA pairing protein], SIF: [ERF family ssDNA pairing protein, NCBI blastp, Dusty Dino, 1.79e-168] Syn: [ERF family ssDNA binding protein, Matches with Dusty Dino, and RunningBrook]

CDS complement (43187 - 43516)
  /gene="78"
  /product="gp78"
  /function="hypothetical protein"
  /locus tag="Casablancas_78"
    /note=Original Glimmer call @bp 43516 has strength 9.49; Genemark calls start at 43516
    /note=SSC: 43516-43187 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_WELCOME_78 [Microbacterium phage Welcome] ],,NCBI, q1:s1 100.0% 9.29917E-71 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.992, -2.5052746077145835, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_WELCOME_78 [Microbacterium phage Welcome] ],,QYC54195,100.0,9.29917E-71 SIF-HHPRED:  SIF-Syn: NKF, Matches with Dusty Dino, Yuma
    /note=SSC: [43187-43516], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [ASegato, 75, Phagesdb, 1e-56] Gap: [-4], LO: [Yes], RBS:[Kibler9, Karlin Medium, 2.992,-2.505, Yes] F: [NKF], SIF: [NKF, NCBI blastp, Dusty Dino, 80, 9.29e-71] Syn: [NKF, Matches with Dusty Dino, Yuma]

CDS complement (43513 - 44244)
  /gene="79"
  /product="gp79"
  /function="exonuclease"
  /locus tag="Casablancas_79"
    /note=Original Glimmer call @bp 44244 has strength 7.41; Genemark calls start at 44244
    /note=SSC: 44244-43513 CP: no SCS: both ST: NI BLAST-Start: [exonuclease [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 4.17476E-180 GAP: 60 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.071, -2.356391881054909, yes F: exonuclease SIF-BLAST: ,,[exonuclease [Microbacterium phage Lyell] ],,AXC36181,100.0,4.17476E-180 SIF-HHPRED:  SIF-Syn: Exonuclease, Matches with Lyell, Yuma, and Fork
    /note=SSC: [43513-44244], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [Fork, 73, Phagesdb, 1e-145] Gap: [60], LO: [No], RBS:[Kibler9, Karlin Medium, 3.071,-2.356, Yes] F: [Exonuclease], SIF: [Exonuclease, NCBI blastp, Lyell, 77,4.17e-180] Syn: [Exonuclease, Matches with Lyell,Yuma, and Fork]

CDS complement (44305 - 44466)
  /gene="80"
  /product="gp80"
  /function="hypothetical protein"
  /locus tag="Casablancas_80"
    /note=Original Glimmer call @bp 44466 has strength 12.63; Genemark calls start at 44466
    /note=SSC: 44466-44305 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_78 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 3.12326E-28 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.24, -4.119687612794143, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_78 [Microbacterium phage Lyell] ],,AXC36182,100.0,3.12326E-28 SIF-HHPRED:  SIF-Syn: NKF, Matches with Lyell,Dusty Dino, and Necrophoxinus
    /note=SSC: [44305-44466], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [Erenyeager, 79, Phagesdb, 1e-24] Gap: [-8], LO: [Yes], RBS:[Kibler9, Karlin Medium, 2.24,-4.120, Yes] F: [NKF], SIF: [NKF, NCBI blastp, Lyell, 78, 3.12e-28] Syn: [NKF, Matches with Lyell,Dusty Dino, and Necrophoxinus]

CDS complement (44459 - 44782)
  /gene="81"
  /product="gp81"
  /function="hypothetical protein"
  /locus tag="Casablancas_81"
    /note=Original Glimmer call @bp 44782 has strength 8.0; Genemark calls start at 44782
    /note=SSC: 44782-44459 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_DUSTYDINO_83 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 1.35501E-71 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.071, -2.417348306996335, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_83 [Microbacterium phage DustyDino] ],,URM87482,100.0,1.35501E-71 SIF-HHPRED:  SIF-Syn: NKF, Matches with Yuma, Dusty Dino, Erenyeager
    /note=SSC: [44459-44782], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [Yuma, Phagesdb, 6e-57] Gap: [-4], LO: [No], RBS:[Kibler9, Karlin Medium, 3.071,-2.417, Yes] F: [NKF], SIF: [NKF, NCBI blastp, Dusty Dino, 83, 1.35e-71] Syn: [NKF, Matches with Yuma, Dusty Dino, Erenyeager]

CDS complement (44779 - 46089)
  /gene="82"
  /product="gp82"
  /function="RNA ligase"
  /locus tag="Casablancas_82"
    /note=Original Glimmer call @bp 46089 has strength 11.91; Genemark calls start at 46089
    /note=SSC: 46089-44779 CP: no SCS: both ST: NI BLAST-Start: [RNA ligase [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 0.0 GAP: 16 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.992, -2.523003374675015, yes F: RNA ligase SIF-BLAST: ,,[RNA ligase [Microbacterium phage DustyDino] ],,URM87483,100.0,0.0 SIF-HHPRED:  SIF-Syn: RNA ligase, Matches with Yuma, Dusty Dino, RunningBrook
    /note=SSC: [44779-46089], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [RunningBrook Phagesdb, 0.0] Gap: [-4], LO: [No], RBS:[Kibler9, Karlin Medium, 2.992,-2.523, Yes] F: [RNA ligase], SIF: [RNA ligase, NCBI blastp, Yuma, 79, 0.0] Syn: [RNA ligase, Matches with Yuma, Dusty Dino, RunningBrook]

CDS complement (46106 - 47029)
  /gene="83"
  /product="gp83"
  /function="polynucleotide kinase"
  /locus tag="Casablancas_83"
    /note=Original Glimmer call @bp 47029 has strength 10.91; Genemark calls start at 47029
    /note=SSC: 47029-46106 CP: no SCS: both ST: NI BLAST-Start: [polynucleotide kinase [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.84, -2.8454123590742793, yes F: polynucleotide kinase SIF-BLAST: ,,[polynucleotide kinase [Microbacterium phage DustyDino] ],,URM87484,99.6743,0.0 SIF-HHPRED:  SIF-Syn: polynucleotide kinase, matches with Yuma, Dusty Dino, RunningBrook
    /note=SSC: [46106-47029], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [Dusty Dino, 85,Phagesdb, 1e-180 ] Gap: [-4], LO: [No], RBS:[Kibler9, Karlin Medium, 2.84,-2.845, Yes] F: [polynucleotide kinase], SIF: [polynucleotide kinase, NCBI blastp, Yuma, 80, 0.0] Syn: [polynucleotide kinase, matches with Yuma, Dusty Dino, RunningBrook]

CDS complement (47026 - 47691)
  /gene="84"
  /product="gp84"
  /function="hypothetical protein"
  /locus tag="Casablancas_84"
    /note=Original Glimmer call @bp 47691 has strength 9.35; Genemark calls start at 47691
    /note=SSC: 47691-47026 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_DUSTYDINO_86 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 2.27189E-163 GAP: 26 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.992, -2.5052746077145835, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_86 [Microbacterium phage DustyDino] ],,URM87485,100.0,2.27189E-163 SIF-HHPRED:  SIF-Syn: NKF, matches with Dusty Dino, RunningBrook, Yuma
    /note=SSC: [47026-47691], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [Dusty Dino, 85,Phagesdb, 1e-136 ] Gap: [26], LO: [Yes], RBS:[Kibler9, Karlin Medium, 2.992, -2.505, Yes] F: [NKF], SIF: [NKF, NCBI blastp, Dusty Dino, 86, 2.27e-163] Syn: [NKF, matches with Dusty Dino, RunningBrook, Yuma]

CDS complement (47718 - 48050)
  /gene="85"
  /product="gp85"
  /function="hypothetical protein"
  /locus tag="Casablancas_85"
    /note=Original Glimmer call @bp 48050 has strength 8.15; Genemark calls start at 48050
    /note=SSC: 48050-47718 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_DUSTYDINO_87 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 2.53545E-75 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.816, -2.8970853586582503, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_87 [Microbacterium phage DustyDino] ],,URM87486,100.0,2.53545E-75 SIF-HHPRED:  SIF-Syn: NKF, Syn: [Matches with Dusty Dino, and Yuma
    /note=80: SSC: [47718-48050], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [Dusty Dino, 87,Phagesdb, 3e-59] Gap: [-4], LO: [No], RBS:[Kibler9, Karlin Medium, 2.816, -2.897, No] F: [NKF], SIF-blastp: [NKF, NCBI blastp, UVK62497, Dusty Dino, 87, 2.53e-75], SIF-HHPred[NKF, 2JPI_A, 52.9, 50.9091], Syn: [NKF, Syn: [Matches with Dusty Dino, and Yuma]

CDS complement (48047 - 49567)
  /gene="86"
  /product="gp86"
  /function="DNA helicase"
  /locus tag="Casablancas_86"
    /note=Original Glimmer call @bp 49567 has strength 11.97; Genemark calls start at 49567
    /note=SSC: 49567-48047 CP: no SCS: both ST: NI BLAST-Start: [DNA helicase [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.909, -4.803592052135256, no F: DNA helicase SIF-BLAST: ,,[DNA helicase [Microbacterium phage DustyDino] ],,URM87487,100.0,0.0 SIF-HHPRED:  SIF-Syn: DNA helicase, Syn: [Matches with Dusty Dino, and RunningBrook
    /note=81: SSC: [48047-49567], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [Dusty Dino, 88,Phagesdb, 0] Gap: [-4], LO: [No], RBS:[Kibler9, Karlin Medium, 1.909, -4.804, No] F: [DNA helicase], SIF-blastp: [DNA helicase, NCBI blastp, URM87487, Dusty Dino, 88, 0], SIF-HHPred[DNA binding protein, Xenopus laevis, 8v6v_X, 100, 98.8142], Syn: [DNA helicase, Syn: [Matches with Dusty Dino, and RunningBrook]

CDS complement (49564 - 49815)
  /gene="87"
  /product="gp87"
  /function="hypothetical protein"
  /locus tag="Casablancas_87"
    /note=Original Glimmer call @bp 49815 has strength 7.96; Genemark calls start at 49815
    /note=SSC: 49815-49564 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_MUSETTA_84 [Microbacterium phage Musetta] ],,NCBI, q1:s1 100.0% 5.95606E-54 GAP: 44 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.678, -3.1085431521568267, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_MUSETTA_84 [Microbacterium phage Musetta] ],,AXH50239,100.0,5.95606E-54 SIF-HHPRED:  SIF-Syn: NKF, Matches with Sea Musetta and Dusty Dino
    /note=81: SSC: [49564-49815], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [Dusty Dino, 89,Phagesdb, 5e-46] Gap: [44], LO: [Yes], RBS:[Kibler9, Karlin Medium, 2.678, -3.109, Yes] F: [NKF], SIF-blastp: [NKF, AXH50239, Sea Musetta, 84, 5.956e-56], SIF-HHPred[NKF, DUF6085, PF1956.4, 97.2, 95.1807], Syn: [NKF, Syn: [Sea Musetta and Dusty Dino]

CDS complement (49860 - 50039)
  /gene="88"
  /product="gp88"
  /function="hypothetical protein"
  /locus tag="Casablancas_88"
    /note=Original Glimmer call @bp 50039 has strength 17.56; Genemark calls start at 50039
    /note=SSC: 50039-49860 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_86 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 3.18294E-31 GAP: 15 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.992, -2.794070146961553, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_86 [Microbacterium phage Lyell] ],,AXC36190,100.0,3.18294E-31 SIF-HHPRED:  SIF-Syn: NKF, Matches with Lyell and Dusty Dino
    /note=SSC: [49860-50039], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [Dusty Dino, 90,Phagesdb, 9e-26] Gap: [15], LO: [Yes], RBS:[Kibler9, Karlin Medium, 2.992,-2794, Yes] F: [NKF], SIF-blastp: [NKF, AXC36190, Lyell, 86, 3.18e-31], SIF-HHPred[NKF, YmgB,PF10798.13, 88.4,69.4915], Syn: [NKF, Matches with Lyell and Dusty Dino]

CDS complement (50055 - 50252)
  /gene="89"
  /product="gp89"
  /function="hypothetical protein"
  /locus tag="Casablancas_89"
    /note=Original Glimmer call @bp 50252 has strength 9.44; Genemark calls start at 50252
    /note=SSC: 50252-50055 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_87 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 1.31055E-37 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.84, -2.9063687850157054, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_87 [Microbacterium phage Lyell] ],,AXC36191,100.0,1.31055E-37 SIF-HHPRED:  SIF-Syn: NKF, matches with Welcome and StevieWelch
    /note=SSC: [50055-50252], CP: [Yes], SCS: [Glimmer], Blast-Start: [Lyell, 87, NCBI Blastp, 1:1, 100%, 1e-37], Gap: [-1], LO: [Yes], F: [function unknown], SIF: [NKF, Phagesdb Blast, Welcome, 89, 1:1,4e-32 ] [NKF, matches with Welcome, StevieWelch]

CDS complement (50252 - 50413)
  /gene="90"
  /product="gp90"
  /function="hypothetical protein"
  /locus tag="Casablancas_90"
    /note=Original Glimmer call @bp 50413 has strength 21.76; Genemark calls start at 50413
    /note=SSC: 50413-50252 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_FORK_84 [Microbacterium phage Fork] ],,NCBI, q1:s1 100.0% 4.13562E-29 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.414, -3.75071250087134, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_FORK_84 [Microbacterium phage Fork] ],,AXC36310,100.0,4.13562E-29 SIF-HHPRED:  SIF-Syn: NKF, Matches with Fork, and Welcome
    /note=SSC: [50252-50413], CP: [Yes], SCS: [Glimmer], ST:[SS], Blast-Start: [ASegato, 86,Phagesdb, 7e-24] Gap: [-4], LO: [Yes], RBS:[Kibler9, Karlin Medium, 2.414, -3.751, No] F: [NKF], SIF-blastp: [NKF, AXC36310, Fork, 84, 4.14e-29 ], SIF-HHPred[NKF, Scop_d1dgsa3, 85.5, 69.8113], Syn: [NKF, Matches with Fork, and Welcome]

CDS complement (50410 - 50625)
  /gene="91"
  /product="gp91"
  /function="hypothetical protein"
  /locus tag="Casablancas_91"
    /note=Original Glimmer call @bp 50625 has strength 11.73; Genemark calls start at 50625
    /note=SSC: 50625-50410 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_MUSETTA_88 [Microbacterium phage Musetta] ],,NCBI, q1:s1 100.0% 4.92646E-44 GAP: 74 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.585, -3.3060637489568596, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_MUSETTA_88 [Microbacterium phage Musetta] ],,AXH50243,100.0,4.92646E-44 SIF-HHPRED:  SIF-Syn: Function Unknown
    /note=SSC: [50410,50625], CP: [yes], SCS: [both], ST: [NI], Blast-Start: [Welcome, 90, Actinobacteriophage Database, 1:1, 98%, 2e-23], Gap: [74], LO: [yes], RBS: [Kibler6, Karlin Medium, 2.455 , -3.751, yes], F: [NKF], SIF: [NKF, Actinobacteriophage Database, Welcome, 90, MZ456035, 98%, 2e-23]

CDS complement (50700 - 51047)
  /gene="92"
  /product="gp92"
  /function="hypothetical protein"
  /locus tag="Casablancas_92"
    /note=Original Glimmer call @bp 51047 has strength 12.68; Genemark calls start at 51047
    /note=SSC: 51047-50700 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_NECROPHOXINUS_92 [Microbacterium phage Necrophoxinus] ],,NCBI, q1:s1 100.0% 1.07938E-77 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.992, -2.523003374675015, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_NECROPHOXINUS_92 [Microbacterium phage Necrophoxinus] ],,QWS69454,100.0,1.07938E-77 SIF-HHPRED:  SIF-Syn: NKF
    /note=SSC: [51047, 50700], CP: [yes], SCS: [both], ST: [NI], Blast-Start: [Musetta, 87, Actinobacteriophage Database, 1:1, 100%, 1e-34], Gap: [-82], LO: [no], RBS: [Kibler6, Karlin Medium, 2.628 , -5.275, yes], F: [NKF], SIF: [NKF]

CDS complement (51044 - 51268)
  /gene="93"
  /product="gp93"
  /function="hypothetical protein"
  /locus tag="Casablancas_93"
    /note=Original Glimmer call @bp 51268 has strength 5.12; Genemark calls start at 51268
    /note=SSC: 51268-51044 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_NECROPHOXINUS_93 [Microbacterium phage Necrophoxinus] ],,NCBI, q1:s1 100.0% 9.48627E-43 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.962, -4.629584883725491, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_NECROPHOXINUS_93 [Microbacterium phage Necrophoxinus] ],,QWS69455,100.0,9.48627E-43 SIF-HHPRED:  SIF-Syn: NKF
    /note=SSC: [51268, 51044], CP: [yes], SCS: [both], ST: [NI], Blast-Start: [Necrophoxinus, Actinobacteriophage Database, 1:1, 100%, 9e-61], Gap: [-115], LO: [yes], RBS: [Kibler6, Karlin Medium, 3.040 , -5.056, yes], F: [NKF], SIF: [NKF]

CDS complement (51265 - 51387)
  /gene="94"
  /product="gp94"
  /function="hypothetical protein"
  /locus tag="Casablancas_94"
    /note=Original Glimmer call @bp 51387 has strength 5.43
    /note=SSC: 51387-51265 CP: no SCS: glimmer ST: NI BLAST-Start: [hypothetical protein SEA_NECROPHOXINUS_94 [Microbacterium phage Necrophoxinus] ],,NCBI, q1:s1 100.0% 1.5785E-17 GAP: -46 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.389, -6.894337276319155, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_NECROPHOXINUS_94 [Microbacterium phage Necrophoxinus] ],,QWS69456,100.0,1.5785E-17 SIF-HHPRED:  SIF-Syn: NKF
    /note=SSC: [51387, 51265], CP: [yes], SCS: [neither], ST: [SS], Blast-Start: [no significant BLAST alignments], Gap: [-85], LO: [no], RBS: [Kibler6, Karlin Medium, 1.994 , -5.527, yes], F: [NKF], SIF: [NKF]

CDS complement (51342 - 51545)
  /gene="95"
  /product="gp95"
  /function="hypothetical protein"
  /locus tag="Casablancas_95"
    /note=Original Glimmer call @bp 51545 has strength 8.43; Genemark calls start at 51545
    /note=SSC: 51545-51342 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_NECROPHOXINUS_95 [Microbacterium phage Necrophoxinus] ],,NCBI, q1:s1 100.0% 8.05643E-43 GAP: 5 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.444, -6.078801327161882, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_NECROPHOXINUS_95 [Microbacterium phage Necrophoxinus] ],,QWS69457,100.0,8.05643E-43 SIF-HHPRED:  SIF-Syn: NKF
    /note=SSC: [51545, 51342], CP: [yes], SCS: [both], ST: [SS], Blast-Start: [Necrophoxinus, 95, Actinobacteriophage Database, 1:1, 98%, 3e-36], Gap: [5], LO: [yes], RBS: [Kibler6, Karlin Medium, 2.886 , -6.079, yes], F: [NKF], SIF: [NKF]

CDS complement (51551 - 51667)
  /gene="96"
  /product="gp96"
  /function="hypothetical protein"
  /locus tag="Casablancas_96"
    /note=Genemark calls start at 51667
    /note=SSC: 51667-51551 CP: yes SCS: genemark ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_94 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 6.81388E-14 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 0.867, -7.095031720982019, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_94 [Microbacterium phage Lyell] ],,AXC36197,100.0,6.81388E-14 SIF-HHPRED:  SIF-Syn: NKF matches with DustyDino g98, Erenyeager g94, Lyell g94
    /note=SSC: [51943, 51551] , CP: [Yes], SCS: [Genemark], ST: [SS], Blast-Start: [ DustyDino, g98, Phages DB, q1:s1, 100%, 6e-13 ], Gap: [-1], LO: [Yes], RBS: [Z Score, Final Score, 0.867, -7.095, No], F: [NKF], SIF: [NKF,  Casablancas_Draft 95, 72, 6e-13], [NKF], SIF-HHPred;[NKF, HHPRED, PF15677.10, 55.2632, 85], SIF-Syn;[NKF, Pham: DustyDino g98, Erenyeager g94, Lyell g94 ]

CDS complement (51667 - 51807)
  /gene="97"
  /product="gp97"
  /function="hypothetical protein"
  /locus tag="Casablancas_97"
    /note=Original Glimmer call @bp 51807 has strength 13.81; Genemark calls start at 51807
    /note=SSC: 51807-51667 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_MUSETTA_94 [Microbacterium phage Musetta] ],,NCBI, q1:s1 100.0% 5.62628E-22 GAP: 84 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.992, -2.442961286954254, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_MUSETTA_94 [Microbacterium phage Musetta] ],,AXH50249,100.0,5.62628E-22 SIF-HHPRED:  SIF-Syn: NKF matches with DustyDino g99, Musetta g94, Musetta g94
    /note=SSC: [51807, 51667] , CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino, g99, Phages DB, q1:s1, 100%, 9e-19 ], Gap: [84], LO: [Yes], RBS:[Z Score, Final Score, 2.992, -2.443, yes], F: [NKF], SIF: [NKF,  Casablancas_Draft	96, 91, 9e-19], [NKF], SIF-HHPred;[NKF, HHPRED,  3OA8_D, 23.913, 15.3], SIF-Syn;[NKF, Pham: DustyDino g99, Musetta g94, Musetta g94]

CDS complement (51892 - 52065)
  /gene="98"
  /product="gp98"
  /function="hypothetical protein"
  /locus tag="Casablancas_98"
    /note=Original Glimmer call @bp 52065 has strength 9.74; Genemark calls start at 52065
    /note=SSC: 52065-51892 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_MUSETTA_95 [Microbacterium phage Musetta] ],,NCBI, q1:s1 100.0% 4.84052E-32 GAP: 33 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.992, -2.523003374675015, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_MUSETTA_95 [Microbacterium phage Musetta] ],,AXH50250,100.0,4.84052E-32 SIF-HHPRED:  SIF-Syn: NKF matches with DustyDino g100, Musetta g95, Necrophoxinus g98
    /note=SSC: [52065, 51892] , CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino, g100, Phages DB, q1:s1, 100%, 2e-29], Gap: [33], LO: [Yes], RBS:[Z Score, Final Score, 2.992,-2.523, yes ], F: [NKF], SIF: [NKF,  Casablancas_Draft	97, 126, 2e-29], [NKF], SIF-HHPred;[NKF, HHPRED,  SCOP_d3vg7a1, 54.386, 43.2], SIF-Syn;[NKF, Pham: DustyDino g100, Musetta g95, Necrophoxinus g98]

CDS complement (52099 - 52428)
  /gene="99"
  /product="gp99"
  /function="terminase"
  /locus tag="Casablancas_99"
    /note=Original Glimmer call @bp 52428 has strength 4.13; Genemark calls start at 52428
    /note=SSC: 52428-52099 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_DUSTYDINO_101 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 3.7048E-74 GAP: 2 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.644, -3.3226484487933954, yes F: terminase SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_101 [Microbacterium phage DustyDino] ],,URM87500,100.0,3.7048E-74 SIF-HHPRED:  SIF-Syn: terminase matches with DustyDino g101,RunningBrook g99, Yuma g96
    /note=SSC: [52428, 52099], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino, g101, Phages DB, q1:s1, 100%, 3e-62], Gap: [2], LO: [Yes], RBS: [Z Score, Final Score, 2.365,-3.915, yes], F: [NKF], SIF: [NKF,  Casablancas_Draft 98, 235, 3e-62], [NKF], SIF-HHPred;[NKF, HHPRED,  PF19106.5, 33.945, 36.6], SIF-Syn;[NKF, Pham: DustyDino g101,RunningBrook g99, Yuma g96]

CDS complement (52431 - 52553)
  /gene="100"
  /product="gp100"
  /function="terminase, large subunit"
  /locus tag="Casablancas_100"
    /note=Original Glimmer call @bp 52553 has strength 4.82; Genemark calls start at 52547
    /note=SSC: 52553-52431 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_DUSTYDINO_102 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 8.76801E-19 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.365, -3.914968956777623, no F: terminase, large subunit SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_102 [Microbacterium phage DustyDino] ],,URM87501,100.0,8.76801E-19 SIF-HHPRED:  SIF-Syn: terminase, large subunit matches with DustyDino g102,RunningBrook g100, Yuma g97
    /note=SSC: [52553, 52431], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino, g102, Phages DB, q1:s1, 100%, 2e-18], Gap: [-4], LO: [Yes], RBS: [Z Score, Final Score, 2.644,-3.323, yes] , F: [NKF], SIF: [NKF,  Casablancas_Draft 98, 90, 2e-18], [NKF], SIF-HHPred;[NKF, HHPRED,  PF21624.2, 60, 55.7], SIF-Syn;[NKF, Pham: DustyDino g102,RunningBrook g100, Yuma g97]

CDS complement (52550 - 52756)
  /gene="101"
  /product="gp101"
  /function="scaffolding protein"
  /locus tag="Casablancas_101"
    /note=Original Glimmer call @bp 52756 has strength 9.61; Genemark calls start at 52756
    /note=SSC: 52756-52550 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_99 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 3.29822E-37 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.585, -3.4470622626190464, no F: scaffolding protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_99 [Microbacterium phage Lyell] ],,AXC36202,100.0,3.29822E-37 SIF-HHPRED:  SIF-Syn: scaffolding protein matches with  DustyDino g103, Erenyeager g99, Lyell	g99
    /note=SSC: [52756, 52550], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino, g103, Phages DB, q1:s1, 100%, 4e-31], Gap: [-4], LO: [Yes], RBS: [Z Score, Final Score, 2.585,-3.447, No], F: [NKF], SIF: [NKF,  Casablancas_Draft 100, 132, 4e-31], [NKF], SIF-HHPred;[NKF, HHPRED,  5XAU_C, 89.4, 85.2941], SIF-Syn;[NKF, Pham: DustyDino g103, Erenyeager g99, Lyell g99]

CDS complement (52753 - 53013)
  /gene="102"
  /product="gp102"
  /function="DNA primase/helicase"
  /locus tag="Casablancas_102"
    /note=Original Glimmer call @bp 53013 has strength 13.98; Genemark calls start at 53013
    /note=SSC: 53013-52753 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_100 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 2.16882E-53 GAP: 8 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.233, -2.45827804503836, yes F: DNA primase/helicase SIF-BLAST: ,,[hypothetical protein SEA_LYELL_100 [Microbacterium phage Lyell] ],,AXC36203,100.0,2.16882E-53 SIF-HHPRED:  SIF-Syn: dna primase/helicase matches with DustyDino g104,  Lyell g99, Necrophoxinus g100
    /note=SSC: [53013, 52753], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino, g104, Phages DB, q1:s1, 100%, 9e-42], Gap: [-226], LO: [No], RBS: [Z Score, Final Score, 2.09,-5.407, No], F: [NKF], SIF: [NKF,  Casablancas_Draft 101, 167, 9e-42], [NKF], SIF-HHPred;[NKF, HHPRED, 5LAA_B, 77.907, 74.8, ], SIF-Syn;[NKF, Pham: DustyDino g104,  Lyell g99, Necrophoxinus g100]

CDS complement (53022 - 53582)
  /gene="103"
  /product="gp103"
  /function="hypothetical protein"
  /locus tag="Casablancas_103"
    /note=Original Glimmer call @bp 53582 has strength 11.02; Genemark calls start at 53582
    /note=SSC: 53582-53022 CP: yes SCS: both ST: SS BLAST-Start: [DNA binding domain protein [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 1.96698E-133 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.49, -4.4158953075094765, yes F: hypothetical protein SIF-BLAST: ,,[DNA binding domain protein [Microbacterium phage DustyDino] ],,URM87504,100.0,1.96698E-133 SIF-HHPRED:  SIF-Syn: NKF matches with DustyDino g105,  RunningBrook g103, Yuma g100
    /note=SSC: [53582,53022], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino, g105, Phages DB, q1:s1, 100%, 1e-103], Gap: [-1], LO: [Yes], RBS: [Z Score, Final Score, 2.49,-4.416, No] , F: [NKF], SIF: [NKF,  Casablancas_Draft 102, 374, 1e-103], [NKF], SIF-HHPred;[NKF, HHPRED, 6IN7_B, 	37.0968, 98.5 ], SIF-Syn;[NKF, Pham: DustyDino g105,  RunningBrook g103, Yuma g100]

CDS complement (53582 - 53770)
  /gene="104"
  /product="gp104"
  /function="hypothetical protein"
  /locus tag="Casablancas_104"
    /note=Original Glimmer call @bp 53770 has strength 9.12; Genemark calls start at 53770
    /note=SSC: 53770-53582 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_DUSTYDINO_106 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 9.4136E-36 GAP: 34 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.346, -3.8761054743559344, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_106 [Microbacterium phage DustyDino] ],,URM87505,100.0,9.4136E-36 SIF-HHPRED:  SIF-Syn: NKF matches with  DustyDino g106,  RunningBrook g104, Yuma g101
    /note=SSC: [53770,53582] , CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino, g106, Phages DB, q1:s1, 100%, 4e-29], Gap: [11], LO: [No], RBS: [Z Score, Final Score, 2.346,-3.876, No] , F: [NKF], SIF: [NKF,  Casablancas_Draft 103, 125, 4e-29], [NKF], SIF-HHPred;[NKF, HHPRED, 9DTR_o , 64.2, 51.6129 ], SIF-Syn;[NKF, Pham: DustyDino g106,  RunningBrook g104, Yuma g101]

CDS complement (53805 - 54059)
  /gene="105"
  /product="gp105"
  /function="hypothetical protein"
  /locus tag="Casablancas_105"
    /note=Original Glimmer call @bp 54059 has strength 6.2; Genemark calls start at 54059
    /note=SSC: 54059-53805 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_DUSTYDINO_107 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 4.88211E-53 GAP: 82 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.741, -3.116480142619113, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_107 [Microbacterium phage DustyDino] ],,URM87506,100.0,4.88211E-53 SIF-HHPRED:  SIF-Syn: NKF DustyDino g107,  RunningBrook g105, Yuma g102
    /note=SSC: [54059,53805] , CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino, g107, Phages DB, q1:s1, 100%, 2e-43], Gap: [82], LO: [No], RBS: [Z Score, Final Score, 2.741,-3.116, Yes ] , F: [NKF], SIF: [NKF,  Casablancas_Draft 104, 173, 	2e-43], [NKF], SIF-HHPred;[NKF, HHPRED, PF20683.2 , 54.7619, 40.2 ], SIF-Syn;[NKF, Pham: DustyDino g107,  RunningBrook g105, Yuma g102]

CDS complement (54142 - 54966)
  /gene="106"
  /product="gp106"
  /function="major capsid protein"
  /locus tag="Casablancas_106"
    /note=Original Glimmer call @bp 54966 has strength 7.92; Genemark calls start at 54966
    /note=SSC: 54966-54142 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_DUSTYDINO_108 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 0.0 GAP: 54 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.415, -3.8079208184165134, no F: major capsid protein SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_108 [Microbacterium phage DustyDino] ],,URM87507,100.0,0.0 SIF-HHPRED:  SIF-Syn: major capsid protein matches with DustyDino g108,  RunningBrook g106, Yuma g103
    /note=SSC: [54966,54142] , CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino, g108, Phages DB, q1:s1, 100%, 1e-153], Gap: [54], LO: [Yes], RBS: [Z Score, Final Score, 2.415,-3.808] , F: [NKF], SIF: [NKF,  Casablancas_Draft 105, 539, 1e-153], [NKF], SIF-HHPred;[NKF, HHPRED, SCOP_d3a5zb1, 12.7737, 61.1 ], SIF-Syn;[NKF, Pham: DustyDino g108,  RunningBrook g106, Yuma g103]

CDS complement (55021 - 55230)
  /gene="107"
  /product="gp107"
  /function="portal protein"
  /locus tag="Casablancas_107"
    /note=Original Glimmer call @bp 55230 has strength 10.31; Genemark calls start at 55230
    /note=SSC: 55230-55021 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_ERENYEAGER_106 [Microbacterium phage Erenyeager]],,NCBI, q1:s1 100.0% 5.18838E-40 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.267, -4.1237215507168505, no F: portal protein SIF-BLAST: ,,[hypothetical protein SEA_ERENYEAGER_106 [Microbacterium phage Erenyeager]],,WMI33976,97.1014,5.18838E-40 SIF-HHPRED:  SIF-Syn: portal protein matches with Erenyeager g106, DustyDino g109, Lyell	g105
    /note=SSC: [55230,55021] , CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [Erenyeager g106, Phages DB, q1:s1, 100%, 2e-34], Gap: [-4], LO: [Yes], RBS: [Z Score, Final Score, 2.267,-4.124, yes] , F: [NKF], SIF: [NKF,  Casablancas_Draft 106, 142, 2e-34], [NKF], SIF-HHPred;[NKF, HHPRED, SCOP_d2outa2, 69.5652, 80.5 ], SIF-Syn;[NKF, Pham: Erenyeager g106, DustyDino g109, Lyell g105 ]

CDS complement (55227 - 55664)
  /gene="108"
  /product="gp108"
  /function="hypothetical protein"
  /locus tag="Casablancas_108"
    /note=Original Glimmer call @bp 55664 has strength 10.71; Genemark calls start at 55664
    /note=SSC: 55664-55227 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_106 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 6.96777E-101 GAP: 50 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.081, -2.253486910374644, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_106 [Microbacterium phage Lyell] ],,AXC36209,100.0,6.96777E-101 SIF-HHPRED:  SIF-Syn: NKF matches with DustyDino g110,  HollowPurple_Draft g107, Issa7_Draft g106
    /note=SSC: [55664,55227] , CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino g110, Phages DB, q1:s1, 100%, 6e-81], Gap: [50], LO: [Yes], RBS:[Z Score, Final Score, 3.081,-2.253, No] , F: [NKF], SIF: [NKF,  Casablancas_Draft 107, 297, 6e-81], [NKF], SIF-HHPred;[NKF, HHPRED, PF10692.14, 	16.5517, 41.3 ], SIF-Syn;[NKF, Pham: DustyDino g110,  HollowPurple_Draft g107, Issa7_Draft g106]

CDS complement (55715 - 56107)
  /gene="109"
  /product="gp109"
  /function="hypothetical protein"
  /locus tag="Casablancas_109"
    /note=Original Glimmer call @bp 56107 has strength 9.95; Genemark calls start at 56107
    /note=SSC: 56107-55715 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_DUSTYDINO_111 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 4.90364E-89 GAP: 50 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.664, -3.219494343057515, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_111 [Microbacterium phage DustyDino] ],,URM87510,100.0,4.90364E-89 SIF-HHPRED:  SIF-Syn: NKF matches with DustyDino g111,  RunningBrook g109, Yuma g106
    /note=SSC: [56107, 55715], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino g111, Phages DB, q1:s1, 100%, 6e-71] , Gap: [51], LO: [Yes], RBS:[Z Score, Final Score, 2.664,-3.219, No] , F: [NKF], SIF: [NKF,  Casablancas_Draft 108, 264, 6e-71], [NKF], SIF-HHPred;[NKF, HHPRED, SCOP_d3trea1, 39.2308, 92.7], SIF-Syn;[NKF, Pham: DustyDino g111,  RunningBrook g109, Yuma g106]

CDS complement (56158 - 56271)
  /gene="110"
  /product="gp110"
  /function="hypothetical protein"
  /locus tag="Casablancas_110"
    /note=Original Glimmer call @bp 56271 has strength 12.88; Genemark calls start at 56271
    /note=SSC: 56271-56158 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_DUSTYDINO_112 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 2.85519E-17 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.842, -4.963787326180191, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_112 [Microbacterium phage DustyDino] ],,URM87511,100.0,2.85519E-17 SIF-HHPRED:  SIF-Syn: NKF, Pham: DustyDino g112,  Issa7_Draft  g108, Lyell g108
    /note=SSC: [56271, 56158], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino g112, Phages DB, q1:s1, 100%, 3e-15], Gap: [-4], LO: [Yes], RBS:[Z Score, Final Score, 1.842 , -4.964, No] , F: [NKF], SIF: [NKF,  Casablancas_Draft 109, 79, 3e-15], [NKF], SIF-HHPred;[NKF, HHPRED, PF22002.1, 48.6486, 94.1], SIF-Syn;[NKF, Pham: DustyDino g112,  Issa7_Draft g108, Lyell g108]

CDS complement (56268 - 56513)
  /gene="111"
  /product="gp111"
  /function="minor tail protein"
  /locus tag="Casablancas_111"
    /note=Original Glimmer call @bp 56513 has strength 9.03; Genemark calls start at 56513
    /note=SSC: 56513-56268 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_DUSTYDINO_113 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 2.08982E-49 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.566, -3.4283035164720754, yes F: minor tail protein SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_113 [Microbacterium phage DustyDino] ],,URM87512,100.0,2.08982E-49 SIF-HHPRED:  SIF-Syn: minor tail protein matches with NKF, Pham: DustyDino g113,  RunningBrook g111, Yuma g107
    /note=SSC: [56107, 55715], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino g113, Phages DB, q1:s1, 100%, 	2e-43], Gap: [51], LO: [Yes], RBS:[Z Score, Final Score, 2.566 , -3.428, Yes], F: [NKF], SIF: [NKF,  Casablancas_Draft 110, 173, 2e-43], [NKF], SIF-HHPred;[NKF, HHPRED, SCOP_d3bida1,  13.5802, 35.7], SIF-Syn;[NKF, Pham: DustyDino g113,  RunningBrook g111, Yuma g107]

CDS complement (56510 - 56920)
  /gene="112"
  /product="gp112"
  /function="ADP-ribosyltransferase"
  /locus tag="Casablancas_112"
    /note=Original Glimmer call @bp 56884 has strength 11.29; Genemark calls start at 56920
    /note=SSC: 56920-56510 CP: yes SCS: both-gm ST: SS BLAST-Start: [hypothetical protein SEA_DUSTYDINO_114 [Microbacterium phage DustyDino] ],,NCBI, q1:s1 100.0% 1.23106E-95 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.71, -4.346318957457468, no F: ADP-ribosyltransferase SIF-BLAST: ,,[hypothetical protein SEA_DUSTYDINO_114 [Microbacterium phage DustyDino] ],,URM87513,99.2647,1.23106E-95 SIF-HHPRED:  SIF-Syn: ADP-ribosyltransferase matches with ASegato g109, DustyDino g114,  RunningBrook g112
    /note=SSC: [56920, 56510], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [ASegato g109, Phages DB, q1:s1, 100%, 		8e-75], Gap: [-4], LO: [Yes], RBS:[Z Score, Final Score, 2.71 , -4.346, No] , F: [NKF], SIF: [NKF,  Casablancas_Draft 111, 256, 2e-68], [NKF], SIF-HHPred;[NKF, HHPRED, SCOP_d2eifa1, 22.7941, 67.5], SIF-Syn;[NKF, Pham: ASegato g109, DustyDino g114,  RunningBrook g112]

CDS complement (56917 - 57366)
  /gene="113"
  /product="gp113"
  /function="hypothetical protein"
  /locus tag="Casablancas_113"
    /note=Original Glimmer call @bp 57366 has strength 14.85; Genemark calls start at 57366
    /note=SSC: 57366-56917 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_MUSETTA_110 [Microbacterium phage Musetta]],,NCBI, q1:s1 100.0% 1.06541E-99 GAP: 55 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.081, -2.253486910374644, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_MUSETTA_110 [Microbacterium phage Musetta]],,AXH50265,98.6577,1.06541E-99 SIF-HHPRED:  SIF-Syn: NKF, Pham:Musetta g110, Fork g108, ASegato g110
    /note=SSC: [57366, 56917], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [ Musetta g110, Phages DB, q1:s1, 100%, 		6e-81], Gap: [55], LO: [Yes], RBS:[Z Score, Final Score, 3.081 , -2.253, No ] , F: [NKF], SIF: [NKF,  Casablancas_Draft 112, 297, 6e-81], [NKF], SIF-HHPred;[NKF, HHPRED,3FRN_A, 32.2148, 64.7], SIF-Syn;[NKF, Pham: Musetta g110, Fork g108, ASegato g110]

CDS complement (57422 - 57991)
  /gene="114"
  /product="gp114"
  /function="tape measure protein"
  /locus tag="Casablancas_114"
    /note=Original Glimmer call @bp 57991 has strength 11.32; Genemark calls start at 57916
    /note=SSC: 57991-57422 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_ERENYEAGER_113 [Microbacterium phage Erenyeager]],,NCBI, q1:s1 100.0% 3.76027E-106 GAP: 31 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.501, -3.83711508627892, no F: tape measure protein SIF-BLAST: ,,[hypothetical protein SEA_ERENYEAGER_113 [Microbacterium phage Erenyeager]],,WMI33983,87.7005,3.76027E-106 SIF-HHPRED:  SIF-Syn: 
    /note=SSC: [57991, 57422], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [ Erenyeager g113, Phages DB, q1:s1, 100%, 1e-105], Gap: [31], LO: [No], RBS:[Z Score, Final Score, 2.501, -3.837, Yes] , F: [NKF], SIF: [NKF,  Casablancas_Draft 113, 380, 1e-105], [NKF], SIF-HHPred;[NKF, HHPRED,PF09629.15, 33.3333, 94.1], SIF-Syn;[NKF, Pham: Erenyeager g113 ,  Necrophoxinus g114, StevieWelch g114]

CDS complement (58023 - 58349)
  /gene="115"
  /product="gp115"
  /function="tape measure protein"
  /locus tag="Casablancas_115"
    /note=Original Glimmer call @bp 58349 has strength 8.55; Genemark calls start at 58349
    /note=SSC: 58349-58023 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_ASEGATO_113 [Microbacterium phage ASegato]],,NCBI, q1:s1 100.0% 2.82729E-70 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.223, -2.0949393225970705, yes F: tape measure protein SIF-BLAST: ,,[hypothetical protein SEA_ASEGATO_113 [Microbacterium phage ASegato]],,WNO26004,99.0741,2.82729E-70 SIF-HHPRED:  SIF-Syn: tape measure protein matches with HollowPurple_Draft g113,  StevieWelch g116, ASegato g113
    /note=SSC: [58349, 58023], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [HollowPurple_Draft g113, Phages DB, q1:s1, 100%, 7e-56], Gap: [-4], LO: [Yes], RBS:[Z Score, Final Score,3.223, -2.095, No] , F: [NKF], SIF: [NKF,  Casablancas_Draft 114, 217, 1e-56], [NKF], SIF-HHPred;[NKF, HHPRED, SCOP_d3trea1, 39.2308, 92.7], SIF-Syn;[NKF, Pham: HollowPurple_Draft	g113,  StevieWelch	g116, ASegato	g113]

CDS complement (58346 - 58687)
  /gene="116"
  /product="gp116"
  /function="hypothetical protein"
  /locus tag="Casablancas_116"
    /note=Original Glimmer call @bp 58687 has strength 2.78; Genemark calls start at 58687
    /note=SSC: 58687-58346 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_LYELL_115 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 5.6656E-75 GAP: 697 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.679, -5.309117108752867, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_115 [Microbacterium phage Lyell] ],,AXC36218,100.0,5.6656E-75 SIF-HHPRED:  SIF-Syn: NKF matches with DustyDino g118,  Issa7_Draft g114, Lyell g115
    /note=SSC: [58687, 58346], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [DustyDino g118, Phages DB, q1:s1, 100%, 1e-63], Gap: [697], LO: [Yes], RBS:[Z Score, Final Score, 1.679, -5.309, No] , F: [NKF], SIF: [NKF,  Casablancas_Draft 115, 239, 1e-63], [NKF], SIF-HHPred;[NKF, HHPRED,  PF13280.11, 	12.3894 , 39.6], SIF-Syn;[NKF, Pham: DustyDino g118,  Issa7_Draft g114, Lyell g115]

CDS complement (59385 - 59543)
  /gene="117"
  /product="gp117"
  /function="hypothetical protein"
  /locus tag="Casablancas_117"
    /note=Original Glimmer call @bp 59543 has strength 2.39; Genemark calls start at 59531
    /note=SSC: 59543-59385 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_MUSETTA_2 [Microbacterium phage Musetta] ],,NCBI, q1:s1 100.0% 8.91379E-29 GAP: 191 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.794, -6.0867266611467965, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_MUSETTA_2 [Microbacterium phage Musetta] ],,AXH50162,98.0769,8.91379E-29 SIF-HHPRED:  SIF-Syn: NKF matches with Casablancas_Draft g1,  DustyDino g2, DustyDino g120
    /note=SSC: [59543, 59385], CP: [Yes], SCS: [Both], ST: [SS], Blast-Start: [ Casablancas_Draft g1,  Phages DB, q1:s1, 100%, 1e-26], Gap: [191], LO: [No], RBS:[Z Score, Final Score, 1.794, -6.087, No] , F: [NKF], SIF: [NKF,  Casablancas_Draft 116, 117, 1e-26], [NKF], SIF-HHPred;[NKF, HHPRED, PF20165.3,17.3077, 45.5], SIF-Syn;[NKF, Pham: Casablancas_Draft	g1,  DustyDino g2, DustyDino g120]

CDS complement (59735 - 60007)
  /gene="118"
  /product="gp118"
  /function="hypothetical protein"
  /locus tag="Casablancas_118"
    /note=Original Glimmer call @bp 59923 has strength 4.81; Genemark calls start at 60007
    /note=SSC: 60007-59735 CP: yes SCS: both-gm ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_118 [Microbacterium phage Lyell] ],,NCBI, q29:s1 68.8889% 4.39694E-35 GAP: 213 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.925, -5.058605177999316, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_118 [Microbacterium phage Lyell] ],,AXC36110,100.0,4.39694E-35 SIF-HHPRED:  SIF-Syn: 
    /note=SSC: [60,007, 59735] CP: [yes] SCS: [both] ST:[SS] BLAST-START: [ 1:1, 98%, 1e-55] GAP: [213] LO: [no] RBS: [Kibler6, Karlin Medium, -5.059, no (1.999, -4.614, no)] F: [NKF] SIF: [NKF, Actinobacteriophage Database, , MZ456035, 98%, 1e-55]

CDS complement (60221 - 60523)
  /gene="119"
  /product="gp119"
  /function="hypothetical protein"
  /locus tag="Casablancas_119"
    /note=Original Glimmer call @bp 60523 has strength 2.07; Genemark calls start at 60331
    /note=SSC: 60523-60221 CP: no SCS: both-gl ST: NI BLAST-Start: [hypothetical protein SEA_NECROPHOXINUS_5 [Microbacterium phage Necrophoxinus] ],,NCBI, q1:s1 100.0% 7.55875E-66 GAP: 3 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.909, -4.8822772450371135, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_NECROPHOXINUS_5 [Microbacterium phage Necrophoxinus] ],,QWS69371,99.0,7.55875E-66 SIF-HHPRED:  SIF-Syn: NKF all sources checked
    /note=SSC: [60,523, 60,221] CP: [yes] SCS: [both] ST:[NA] BLAST-START: [No significant BLAST alignments] GAP: [-4] LO: [yes] RBS: [Kibler6, Karlin Medium, 3.273, -4.882, yes] F: [NKF] SIF: [NKF]

CDS complement (60527 - 61000)
  /gene="120"
  /product="gp120"
  /function="hypothetical protein"
  /locus tag="Casablancas_120"
    /note=Original Glimmer call @bp 61000 has strength 12.56; Genemark calls start at 61000
    /note=SSC: 61000-60527 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_ASEGATO_6 [Microbacterium phage ASegato] ],,NCBI, q1:s1 100.0% 6.42369E-111 GAP: 80 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.749, -5.080915947802713, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_ASEGATO_6 [Microbacterium phage ASegato] ],,WNO25902,99.3631,6.42369E-111 SIF-HHPRED:  SIF-Syn: NKF all sources checked
    /note=SSC: [61,000, 60,527] CP: [yes] SCS: [both] ST:[SS] BLAST-START: [Welcome, 117, Actinobacteriophage Database, 1:1, 98%, 4e-62] GAP: [80] LO: [yes] RBS: [Kibler6, Karlin Medium, 1.712, -5.081, yes] F: [NKF]

CDS complement (61081 - 61467)
  /gene="121"
  /product="gp121"
  /function="hypothetical protein"
  /locus tag="Casablancas_121"
    /note=Original Glimmer call @bp 61467 has strength 14.36; Genemark calls start at 61467
    /note=SSC: 61467-61081 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_MUSETTA_120 [Microbacterium phage Musetta] ],,NCBI, q1:s1 100.0% 3.06134E-86 GAP: 27 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.925, -5.058605177999316, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_MUSETTA_120 [Microbacterium phage Musetta] ],,AXH50167,100.0,3.06134E-86 SIF-HHPRED:  SIF-Syn: NKF
    /note=SSC: [61,467, 61,081] CP: [no] SCS: [glimmer] ST:[SS] GAP: [27] LO: [yes] RBS: [Kibler6, Karlin Medium, 2.419, -5.059, yes] F: [NKF] SIF: [NKF, Actinobacteriophage Database, Welcome 118, MZ456035, 90%, 4e-26]

CDS complement (61495 - 61872)
  /gene="122"
  /product="gp122"
  /function="hypothetical protein"
  /locus tag="Casablancas_122"
    /note=Original Glimmer call @bp 61872 has strength 15.45; Genemark calls start at 61872
    /note=SSC: 61872-61495 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_ERENYEAGER_5 [Microbacterium phage Erenyeager] ],,NCBI, q1:s1 100.0% 3.2011E-84 GAP: 66 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.758, -2.939678097737297, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_ERENYEAGER_5 [Microbacterium phage Erenyeager] ],,WMI33880,99.2,3.2011E-84 SIF-HHPRED:  SIF-Syn: NKF
    /note=SSC: [61872, 61495] CP: [yes] SCS: [both] ST:[SS] BLAST-START: [Lyell, 117, Actinobacteriophage Database, 1:1, 100%, 4e-26] GAP: [66] LO: [no] RBS: [Kibler6, Karlin Medium, 1.828,-2.940, no] F: [NKF] SIF: [NKF]

CDS complement (61939 - 62217)
  /gene="123"
  /product="gp123"
  /function="hypothetical protein"
  /locus tag="Casablancas_123"
    /note=Original Glimmer call @bp 62217 has strength 1.69; Genemark calls start at 62217
    /note=SSC: 62217-61939 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_WELCOME_9 [Microbacterium phage Welcome] ],,NCBI, q1:s1 100.0% 8.49465E-60 GAP: 10 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.937, -2.5594668560256912, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_WELCOME_9 [Microbacterium phage Welcome] ],,QYC54131,100.0,8.49465E-60 SIF-HHPRED:  SIF-Syn: NKF
    /note=SSC: [62217, 61939 ] CP: [yes] SCS: [both-cs] ST:[NI] BLAST-START: [Necrophoxinus, 119, Actinobacteriophage Database, 1:1, 95%, 5e-30] GAP: [10] LO: [yes] RBS: [Kibler6, Karlin Medium, 1.541, -2.559, no] F: [NKF] SIF: [NKF, Actinobacteriophage Database, Necrophoxinus 119, 95%, 5e-30]

CDS complement (62228 - 62383)
  /gene="124"
  /product="gp124"
  /function="hypothetical protein"
  /locus tag="Casablancas_124"
    /note=Original Glimmer call @bp 62383 has strength 5.53; Genemark calls start at 62383
    /note=SSC: 62383-62228 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_LYELL_10 [Microbacterium phage Lyell] ],,NCBI, q1:s1 100.0% 1.07778E-25 GAP: 0 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.816, -2.8793565916978188, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_LYELL_10 [Microbacterium phage Lyell] ],,AXC36117,98.0392,1.07778E-25 SIF-HHPRED:  SIF-Syn: NKF
    /note=SSC: [62383, 62228] CP: [yes] SCS: [genemark-cs] ST:[SS] BLAST-START: [Welcome, 121, Actinobacteriophage Database, 1:1, 81%, 2e-56]  LO: [no] RBS: [Kibler6, Karlin Medium, 1.014, -7.793, no] F: [NKF] SIF: [NKF]