CDS 1 - 810
  /gene="1"
  /product="ParB-like nuclease domain"
  /function="ParB-like nuclease domain"
  /locus tag="ForDig_1"
    /note=Original Glimmer call @bp 1 has strength 23.54; Genemark calls start at 1
    /note=SSC: Start = 1, Stop = 810. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.047 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 810 bp is not the longest possible ORF. GAP: 0 bp. ST: SS=NA. F: ParB-like nuclease domain. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 01, Function= ParB-like protein, EValue= 1.0E-149. NCBIBLAST= PhageName= ParB-like partition protein [Mycobacterium phage Julie1] >gb|AHJ88501.1| ParB-like protein [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:269, QueryRange= 1:269, EValue= 0.0. HHPRED= Accession= 7BNR_B, Description= ParB family protein; DNA-binding protein, CTP, Myxococcus, DNA-segregation, DNA BINDING PROTEIN; HET: UFQ, GOL; 1.7A {Myxococcus xanthus (strain DK 1622)}, Probability= 99.5. Coverage= 50.9294, SubjectRange= 2:127, QueryRange= 2:147. CDD= .

CDS 807 - 1763
  /gene="2"
  /product="oxidoreductase"
  /function="oxidoreductase"
  /locus tag="ForDig_2"
    /note=Original Glimmer call @bp 807 has strength 16.52; Genemark calls start at 807
    /note=SSC: Start = 807, Stop = 1763. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.806 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 957 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: oxidoreductase. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 02, Function= queuine-tRNA ribosyltransferase, EValue= 0.0. NCBIBLAST= PhageName= queuine tRNA-ribosyltransferase [Mycobacterium phage Julie1] >gb|AHJ88502.1| queuine-tRNA ribosyltransferase [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:318, QueryRange= 1:318, EValue= 0.0. HHPRED= Accession= cd20331, Description= JBP-like; oxygenase domain of uncharacterized bacterial and phage proteins similar to kinetoplastid J-binding protein (JBP) 1 and JBP2., Probability= 100.0. Coverage= 78.6164, SubjectRange= 2:270, QueryRange= 2:259. CDD= Accession= pfam12851, Coverage= 54.0881, SubjectRange= 9:166, QueryRange= 9:248, EValue= 2.08585E-19.

CDS 1799 - 2374
  /gene="3"
  /product="thymidylate kinase"
  /function="thymidylate kinase"
  /locus tag="ForDig_3"
    /note=Original Glimmer call @bp 1799 has strength 17.51; Genemark calls start at 1799
    /note=SSC: Start = 1799, Stop = 2374. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.686 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 576 bp is the longest possible ORF. GAP: 35 bp. ST: SS=NA. F: thymidylate kinase. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 01, Function= terminase small subunit, EValue= 1.0E-104. NCBIBLAST= PhageName= terminase small subunit [Mycobacterium phage 39HC] >ref|YP_009032227.1| terminase small subunit [Mycobacterium phage Hosp] >gb|AHJ88303.1| terminase small subunit [Mycobacterium phage 39HC] >gb|AHJ88403.1| terminase small subunit [Mycobacterium phage 40BC] >gb|AHK11955.1| terminase small subunit [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:191, QueryRange= 1:191, EValue= 1.50996E-133. HHPRED= Accession= PF18751.6, Description= Ploopntkinase3 ; P-loop Nucleotide Kinase3, Probability= 99.9. Coverage= 97.3822, SubjectRange= 1:183, QueryRange= 1:187. CDD= .
    /note=called as tymidylate kinase based on high hhpred hits

CDS 2384 - 4144
  /gene="4"
  /product="terminase"
  /function="terminase"
  /locus tag="ForDig_4"
    /note=Original Glimmer call @bp 2384 has strength 19.65; Genemark calls start at 2384
    /note=SSC: Start = 2384, Stop = 4144. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.423 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 1761 bp is the longest possible ORF. GAP: 9 bp. ST: SS=NA. F: terminase. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 04, Function= terminase large subunit, EValue= 0.0. NCBIBLAST= PhageName= terminase large subunit [Mycobacterium phage Julie1] >gb|AHJ88504.1| terminase large subunit [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:586, QueryRange= 1:586, EValue= 0.0. HHPRED= Accession= 8DGC_H, Description= Terminase, large subunit; phage defense, pattern-recognition receptor, nlr, stand, atpase, ANTIVIRAL PROTEIN; HET: ATP;{Salmonella enterica}, Probability= 100.0. Coverage= 83.7884, SubjectRange= 11:534, QueryRange= 11:558. CDD= Accession= pfam03237, Coverage= 42.3208, SubjectRange= 4:213, QueryRange= 4:364, EValue= 6.30031E-6.

CDS complement (4141 - 4719)
  /gene="5"
  /product="RuvC-like resolvase"
  /function="RuvC-like resolvase"
  /locus tag="ForDig_5"
    /note=Original Glimmer call @bp 4587 has strength 20.78; Genemark calls start at 4719
    /note=SSC: Start = 4719, Stop = 4141. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.686 is not the highest start score. SCS: Start is not called by Glimmer and is called by Genemark. LO: 579 bp is the longest possible ORF. GAP: 31 bp. ST: SS=NA. F: RuvC-like resolvase. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 5, Function= RuvC-like resolvase, EValue= 1.0E-105. NCBIBLAST= PhageName= RuvC-like Holliday junction resolvase [Mycobacterium phage KayaCho] >gb|AGT12909.1| RuvC-like resolvase [Mycobacterium phage KayaCho], Coverage= 100.0, SubjectRange= 1:192, QueryRange= 1:192, EValue= 2.54839E-134. HHPRED= Accession= SCOP_d1hjra_, Description= c.55.3.6 (A:) RuvC resolvase {Escherichia coli [TaxId: 562]} | CLASS: Alpha and beta proteins (a/b), FOLD: Ribonuclease H-like motif, SUPFAM: Ribonuclease H-like, FAM: RuvC resolvase, Probability= 99.9. Coverage= 90.625, SubjectRange= 1:156, QueryRange= 1:175. CDD= Accession= COG0817, Coverage= 84.375, SubjectRange= 1:145, QueryRange= 1:164, EValue= 4.40716E-14.

CDS 4751 - 5182
  /gene="6"
  /product="membrane protein"
  /function="membrane protein"
  /locus tag="ForDig_6"
    /note=Original Glimmer call @bp 4751 has strength 16.6; Genemark calls start at 4766
    /note=SSC: Start = 4751, Stop = 5182. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.784 is not the highest start score. SCS: Start is called by Glimmer and is not called by Genemark. LO: 432 bp is the longest possible ORF. GAP: 31 bp. ST: SS=NA. F: membrane protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 06, Function= function unknown, EValue= 2.0E-77. NCBIBLAST= PhageName= hypothetical protein CG90_gp06 [Mycobacterium phage Julie1] >gb|AHJ88506.1| hypothetical protein Jolie1_06 [Mycobacterium phage Julie1], Coverage= 96.5035, SubjectRange= 1:138, QueryRange= 1:143, EValue= 7.61309E-95. HHPRED= Accession= PF07098.16, Description= DUF1360 ; Protein of unknown function (DUF1360), Probability= 99.8. Coverage= 76.2238, SubjectRange= 1:100, QueryRange= 1:126. CDD= Accession= pfam07098, Coverage= 55.2448, SubjectRange= 1:70, QueryRange= 1:95, EValue= 2.39726E-5.
    /note=called a membrane protein based on Deep TMHMM data

CDS 5208 - 7124
  /gene="7"
  /product="portal protein"
  /function="portal protein"
  /locus tag="ForDig_7"
    /note=Original Glimmer call @bp 5208 has strength 21.41; Genemark calls start at 5223
    /note=SSC: Start = 5208, Stop = 7124. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.918 is not the highest start score. SCS: Start is called by Glimmer and is not called by Genemark. LO: 1917 bp is the longest possible ORF. GAP: 25 bp. ST: SS=NA. F: portal protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 07, Function= function unknown, EValue= 0.0. NCBIBLAST= PhageName= portal protein [Mycobacterium phage Julie1] >gb|AHJ88507.1| hypothetical protein Jolie1_07 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:638, QueryRange= 1:638, EValue= 0.0. HHPRED= Accession= 8FQL_D, Description= Portal protein; Prohead I, icosahedral symmetry, HK97, phage, capsid, VIRUS; 3.6A {Escherichia phage HK97}, Probability= 100.0. Coverage= 62.5392, SubjectRange= 54:398, QueryRange= 54:451. CDD= .

CDS 7124 - 9544
  /gene="8"
  /product="portal protein"
  /function="portal protein"
  /locus tag="ForDig_8"
    /note=Original Glimmer call @bp 7493 has strength 18.66; Genemark calls start at 7490
    /note=SSC: Start = 7124, Stop = 9544. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.014 is the highest start score. SCS: Start is not called by Glimmer and is not called by Genemark. LO: 2421 bp is the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: portal protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 08, Function= portal protein, EValue= 0.0. NCBIBLAST= PhageName= portal protein [Mycobacterium phage Julie1] >gb|AHJ88508.1| portal protein [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:806, QueryRange= 1:806, EValue= 0.0. HHPRED= Accession= 8QQN_PL, Description= Portal protein; Archaeal virus, portal, portal capsid interface, Mg ions, VIRUS; HET: MG, HIP; 2.342A {Haloferax tailed virus 1}, Probability= 99.3. Coverage= 18.3623, SubjectRange= 517:671, QueryRange= 517:297. CDD= Accession= pfam04233, Coverage= 13.0273, SubjectRange= 21:109, QueryRange= 21:291, EValue= 1.38742E-4.

CDS 9546 - 9785
  /gene="9"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_9"
    /note=Original Glimmer call @bp 9546 has strength 20.01; Genemark calls start at 9546
    /note=SSC: Start = 9546, Stop = 9785. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.014 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 240 bp is not the longest possible ORF. GAP: 1 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 07, Function= function unknown, EValue= 4.0E-40. NCBIBLAST= PhageName= hypothetical protein CG91_gp009 [Mycobacterium phage 39HC] >ref|YP_009032233.1| hypothetical protein FH38_gp07 [Mycobacterium phage Hosp] >gb|AHJ88309.1| hypothetical protein 39HC_09 [Mycobacterium phage 39HC] >gb|AHJ88409.1| hypothetical protein 40BC_09 [Mycobacterium phage 40BC] >gb|AHK11961.1| hypothetical protein Hosp_07 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:79, QueryRange= 1:79, EValue= 4.26885E-46. HHPRED= . CDD= .

CDS 9865 - 11721
  /gene="10"
  /product="major capsid protein"
  /function="major capsid protein"
  /locus tag="ForDig_10"
    /note=Original Glimmer call @bp 9931 has strength 15.44; Genemark calls start at 9865
    /note=SSC: Start = 9865, Stop = 11721. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 0.754 is not the highest start score. SCS: Start is not called by Glimmer and is called by Genemark. LO: 1857 bp is not the longest possible ORF. GAP: 79 bp. ST: SS=NA. F: major capsid protein. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 10, Function= major capsid hexamer protein, EValue= 0.0. NCBIBLAST= PhageName= major head protein [Mycobacterium phage KayaCho] >gb|AGT12914.1| major capsid hexamer protein [Mycobacterium phage KayaCho], Coverage= 100.0, SubjectRange= 11:629, QueryRange= 11:618, EValue= 0.0. HHPRED= . CDD= Accession= NF033847, Coverage= 93.0421, SubjectRange= 1:549, QueryRange= 1:618, EValue= 0.0.

CDS 11818 - 12585
  /gene="11"
  /product="major capsid pentamer protein"
  /function="major capsid pentamer protein"
  /locus tag="ForDig_11"
    /note=Original Glimmer call @bp 11818 has strength 15.84; Genemark calls start at 11818
    /note=SSC: Start = 11818, Stop = 12585. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.014 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 768 bp is the longest possible ORF. GAP: 96 bp. ST: SS=NA. F: major capsid pentamer protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 011, Function= function unknown, EValue= 1.0E-151. NCBIBLAST= PhageName= major capsid pentamer protein [Mycobacterium phage Julie1] >gb|AHJ88511.1| major capsid pentamer protein [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:255, QueryRange= 1:255, EValue= 0.0. HHPRED= . CDD= .

CDS 12599 - 13540
  /gene="12"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_12"
    /note=Original Glimmer call @bp 12599 has strength 21.68; Genemark calls start at 12599
    /note=SSC: Start = 12599, Stop = 13540. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.762 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 942 bp is the longest possible ORF. GAP: 13 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 012, Function= function unknown, EValue= 1.0E-168. NCBIBLAST= PhageName= hypothetical protein CG90_gp12 [Mycobacterium phage Julie1] >gb|AHJ88512.1| hypothetical protein Jolie1_012 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:312, QueryRange= 1:313, EValue= 0.0. HHPRED= . CDD= .

CDS 13572 - 14057
  /gene="13"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_13"
    /note=Original Glimmer call @bp 13572 has strength 5.81; Genemark calls start at 13566
    /note=SSC: Start = 13572, Stop = 14057. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.111 is not the highest start score. SCS: Start is called by Glimmer and is not called by Genemark. LO: 486 bp is not the longest possible ORF. GAP: 31 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 011, Function= function unknown, EValue= 1.0E-77. NCBIBLAST= PhageName= hypothetical protein CG90_gp13 [Mycobacterium phage Julie1] >gb|AHJ88513.1| hypothetical protein Jolie1_013 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:159, QueryRange= 1:161, EValue= 3.75392E-91. HHPRED= Accession= PF20040.4, Description= DUF6442 ; Family of unknown function (DUF6442), Probability= 93.2. Coverage= 69.5652, SubjectRange= 1:103, QueryRange= 1:113. CDD= .

CDS 14057 - 14554
  /gene="14"
  /product="membrane protein"
  /function="membrane protein"
  /locus tag="ForDig_14"
    /note=Original Glimmer call @bp 14090 has strength 17.01; Genemark calls start at 14057
    /note=SSC: Start = 14057, Stop = 14554. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.574 is not the highest start score. SCS: Start is not called by Glimmer and is called by Genemark. LO: 498 bp is not the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: membrane protein. FS: PHDBLAST= PhageName= Imvubu, ProteinNumber= 13, Function= function unknown, EValue= 6.0E-81. NCBIBLAST= PhageName= hypothetical protein I5G63_gp013 [Mycobacterium phage Imvubu] >gb|QHB37754.1| hypothetical protein PBI_IMVUBU_13 [Mycobacterium phage Imvubu], Coverage= 97.5758, SubjectRange= 3:163, QueryRange= 3:164, EValue= 1.90027E-98. HHPRED= . CDD= .

CDS 14551 - 14883
  /gene="15"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_15"
    /note=Original Glimmer call @bp 14551 has strength 15.55; Genemark calls start at 14551
    /note=SSC: Start = 14551, Stop = 14883. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.445 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 333 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Imvubu, ProteinNumber= 14, Function= function unknown, EValue= 1.0E-54. NCBIBLAST= PhageName= hypothetical protein I5G63_gp014 [Mycobacterium phage Imvubu] >gb|QHB37755.1| hypothetical protein PBI_IMVUBU_14 [Mycobacterium phage Imvubu], Coverage= 100.0, SubjectRange= 1:110, QueryRange= 1:110, EValue= 3.52926E-71. HHPRED= . CDD= .

CDS 14970 - 15776
  /gene="16"
  /product="major tail protein"
  /function="major tail protein"
  /locus tag="ForDig_16"
    /note=Original Glimmer call @bp 14970 has strength 18.72; Genemark calls start at 14970
    /note=SSC: Start = 14970, Stop = 15776. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.836 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 807 bp is the longest possible ORF. GAP: 86 bp. ST: SS=NA. F: major tail protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 016, Function= major tail subunit, EValue= 1.0E-157. NCBIBLAST= PhageName= major tail protein [Mycobacterium phage Julie1] >gb|AHJ88516.1| major tail subunit [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:268, QueryRange= 1:268, EValue= 0.0. HHPRED= Accession= PF06488.16, Description= L_lac_phage_MSP ; Phage tail tube protein, Probability= 74.0. Coverage= 69.0299, SubjectRange= 15:170, QueryRange= 15:192. CDD= .

CDS complement (15842 - 16105)
  /gene="17"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_17"
    /note=Original Glimmer call @bp 16105 has strength 18.19; Genemark calls start at 16105
    /note=SSC: Start = 16105, Stop = 15842. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.653 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 264 bp is not the longest possible ORF. GAP: 115 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 017, Function= function unknown, EValue= 6.0E-39. NCBIBLAST= PhageName= hypothetical protein CG90_gp17 [Mycobacterium phage Julie1] >gb|AHJ88517.1| hypothetical protein Jolie1_017 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 15:101, QueryRange= 15:87, EValue= 3.5057E-49. HHPRED= . CDD= .

CDS 16221 - 16970
  /gene="18"
  /product="head-to-tail adaptor"
  /function="head-to-tail adaptor"
  /locus tag="ForDig_18"
    /note=Original Glimmer call @bp 16221 has strength 17.63; Genemark calls start at 16221
    /note=SSC: Start = 16221, Stop = 16970. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 0.89 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 750 bp is the longest possible ORF. GAP: 115 bp. ST: SS=NA. F: head-to-tail adaptor. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 018, Function= function unknown, EValue= 1.0E-143. NCBIBLAST= PhageName= head-tail adaptor [Mycobacterium phage Julie1] >gb|AHJ88518.1| hypothetical protein Jolie1_018 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:249, QueryRange= 1:249, EValue= 2.55868E-172. HHPRED= Accession= 7Z4W_a, Description= Head completion protein gp15; Bacteriophage, SPP1, Portal Protein, Head completion proteins, Connector Complex, DNA Channel, VIRAL PROTEIN; 2.7A {Bacillus subtilis}, Probability= 96.9. Coverage= 31.3253, SubjectRange= 45:102, QueryRange= 45:245. CDD= .

CDS 16967 - 17515
  /gene="19"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_19"
    /note=Original Glimmer call @bp 17000 has strength 13.86; Genemark calls start at 17000
    /note=SSC: Start = 16967, Stop = 17515. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.212 is not the highest start score. SCS: Start is not called by Glimmer and is not called by Genemark. LO: 549 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 019, Function= function unknown, EValue= 1.0E-103. NCBIBLAST= PhageName= hypothetical protein CG90_gp19 [Mycobacterium phage Julie1] >gb|AHJ88519.1| hypothetical protein Jolie1_019 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:182, QueryRange= 1:182, EValue= 2.21091E-126. HHPRED= . CDD= .

CDS 17526 - 17846
  /gene="20"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_20"
    /note=Original Glimmer call @bp 17526 has strength 20.12; Genemark calls start at 17526
    /note=SSC: Start = 17526, Stop = 17846. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.183 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 321 bp is the longest possible ORF. GAP: 10 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 020, Function= function unknown, EValue= 4.0E-55. NCBIBLAST= PhageName= hypothetical protein CG90_gp20 [Mycobacterium phage Julie1] >gb|AHJ88520.1| hypothetical protein Jolie1_020 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:106, QueryRange= 1:106, EValue= 2.56581E-68. HHPRED= Accession= 2HJQ_A, Description= Hypothetical protein yqbF; two-domain, Bsu26130, YqbF, NESG, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium; NMR {Bacillus subtilis} SCOP: a.140.3.2, d.344.1.1, l.1.1.1, Probability= 97.2. Coverage= 96.2264, SubjectRange= 2:102, QueryRange= 2:103. CDD= .

CDS 17846 - 18259
  /gene="21"
  /product="tail assembly chaperone"
  /function="tail assembly chaperone"
  /locus tag="ForDig_21"
    /note=Original Glimmer call @bp 17846 has strength 9.64; Genemark calls start at 17846
    /note=SSC: Start = 17846, Stop = 18259. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.089 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 414 bp is the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: tail assembly chaperone. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 021, Function= tail assembly chaperone, EValue= 2.0E-74. NCBIBLAST= PhageName= tail assembly chaperone [Mycobacterium phage Julie1] >gb|AHJ88521.1| tail assembly chaperone [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:137, QueryRange= 1:137, EValue= 3.11233E-90. HHPRED= Accession= PF04883.17, Description= HK97-gp10_like ; Bacteriophage HK97-gp10, putative tail-component, Probability= 98.8. Coverage= 51.0949, SubjectRange= 7:102, QueryRange= 7:83. CDD= .

CDS 18356 - 19030
  /gene="22"
  /product="tail assembly chaperone"
  /function="tail assembly chaperone"
  /locus tag="ForDig_22"
    /note=Original Glimmer call @bp 18356 has strength 18.74; Genemark calls start at 18356
    /note=SSC: Start = 18356, Stop = 19030. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.263 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 675 bp is not the longest possible ORF. GAP: 96 bp. ST: SS=NA. F: tail assembly chaperone. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 022, Function= tail assembly chaperone, EValue= 1.0E-122. NCBIBLAST= PhageName= tail assembly chaperone [Mycobacterium phage Julie1] >gb|AHJ88522.1| tail assembly chaperone [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 16:240, QueryRange= 16:224, EValue= 1.26226E-151. HHPRED= Accession= PF10963.13, Description= Phage_TAC_10 ; Phage tail assembly chaperone, Probability= 94.3. Coverage= 34.8214, SubjectRange= 2:72, QueryRange= 2:213. CDD= .

CDS 19058 - 25027
  /gene="23"
  /product="tape measure protein"
  /function="tape measure protein"
  /locus tag="ForDig_23"
    /note=Original Glimmer call @bp 19058 has strength 16.81; Genemark calls start at 19058
    /note=SSC: Start = 19058, Stop = 25027. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.548 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 5970 bp is the longest possible ORF. GAP: 27 bp. ST: SS=NA. F: tape measure protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 023, Function= tapemeasure protein, EValue= 0.0. NCBIBLAST= PhageName= tail length tape measure protein [Mycobacterium phage Julie1] >gb|AHJ88523.1| tapemeasure protein [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:1992, QueryRange= 1:1989, EValue= 0.0. HHPRED= Accession= 6V8I_BF, Description= Tape Measure Protein, gp57; phage tail, tail tip, tape measure protein, VIRAL PROTEIN; 3.7A {Staphylococcus virus 80alpha}, Probability= 99.2. Coverage= 11.5133, SubjectRange= 334:562, QueryRange= 334:480. CDD= .

CDS 25037 - 26470
  /gene="24"
  /product="minor tail protein"
  /function="minor tail protein"
  /locus tag="ForDig_24"
    /note=Original Glimmer call @bp 25037 has strength 17.66; Genemark calls start at 25037
    /note=SSC: Start = 25037, Stop = 26470. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.177 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 1434 bp is the longest possible ORF. GAP: 9 bp. ST: SS=NA. F: minor tail protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 024, Function= minor tail subunit, EValue= 0.0. NCBIBLAST= PhageName= minor tail subunit [Mycobacterium phage Julie1] >gb|AHJ88524.1| minor tail subunit [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:477, QueryRange= 1:477, EValue= 0.0. HHPRED= Accession= 4V96_AS, Description= ORF46; Distal tail protein, Receptor-binding protein, Phage baseplate, host adsorption apparatus, genome injection device, VIRAL PROTEIN; 3.8A {Lactococcus phage TP901-1}, Probability= 94.0. Coverage= 29.979, SubjectRange= 37:154, QueryRange= 37:284. CDD= .

CDS 26470 - 27558
  /gene="25"
  /product="minor tail protein"
  /function="minor tail protein"
  /locus tag="ForDig_25"
    /note=Original Glimmer call @bp 26470 has strength 20.2; Genemark calls start at 26470
    /note=SSC: Start = 26470, Stop = 27558. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.173 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 1089 bp is not the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: minor tail protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 025, Function= minor tail subunit, EValue= 0.0. NCBIBLAST= PhageName= minor tail protein [Mycobacterium phage Julie1] >gb|AHJ88525.1| minor tail subunit [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:362, QueryRange= 1:362, EValue= 0.0. HHPRED= Accession= 3D37_B, Description= Tail protein, 43 kDa; tail protein, structural genomics, PSI, MCSG, Protein Structure Initiative, Midwest Center for Structural Genomics, UNKNOWN FUNCTION; 2.1A {Neisseria meningitidis MC58} SCOP: b.106.1.1, Probability= 99.8. Coverage= 92.8177, SubjectRange= 1:342, QueryRange= 1:342. CDD= .

CDS 27555 - 30056
  /gene="26"
  /product="minor tail protein"
  /function="minor tail protein"
  /locus tag="ForDig_26"
    /note=Original Glimmer call @bp 27555 has strength 20.64; Genemark calls start at 27555
    /note=SSC: Start = 27555, Stop = 30056. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.192 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 2502 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: minor tail protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 026, Function= function unknown, EValue= 0.0. NCBIBLAST= PhageName= minor tail protein [Mycobacterium phage Julie1] >gb|AHJ88526.1| hypothetical protein Jolie1_026 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:833, QueryRange= 1:833, EValue= 0.0. HHPRED= Accession= 9D93_Pb, Description= Minor tail protein; Bacteriophage, tail tip, VIRAL PROTEIN;{Mycobacterium phage Bxb1}, Probability= 100.0. Coverage= 70.9484, SubjectRange= 11:573, QueryRange= 11:831. CDD= .

CDS 30056 - 31282
  /gene="27"
  /product="minor tail protein"
  /function="minor tail protein"
  /locus tag="ForDig_27"
    /note=Original Glimmer call @bp 30056 has strength 18.74; Genemark calls start at 30056
    /note=SSC: Start = 30056, Stop = 31282. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.362 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 1227 bp is the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: minor tail protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 027, Function= minor tail subunit, EValue= 0.0. NCBIBLAST= PhageName= minor tail protein [Mycobacterium phage Julie1] >gb|AHJ88527.1| minor tail subunit [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:402, QueryRange= 1:408, EValue= 0.0. HHPRED= Accession= 9D93_Pb, Description= Minor tail protein; Bacteriophage, tail tip, VIRAL PROTEIN;{Mycobacterium phage Bxb1}, Probability= 99.7. Coverage= 42.1569, SubjectRange= 407:572, QueryRange= 407:407. CDD= .

CDS 31292 - 31678
  /gene="28"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_28"
    /note=Original Glimmer call @bp 31319 has strength 13.58; Genemark calls start at 31292
    /note=SSC: Start = 31292, Stop = 31678. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.497 is the highest start score. SCS: Start is not called by Glimmer and is called by Genemark. LO: 387 bp is the longest possible ORF. GAP: 9 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= 40BC, ProteinNumber= 028, Function= function unknown, EValue= 3.0E-68. NCBIBLAST= PhageName= head protein [Mycobacterium phage 39HC] >gb|AHJ88328.1| hypothetical protein 39HC_028 [Mycobacterium phage 39HC] >gb|AHJ88428.1| hypothetical protein 40BC_028 [Mycobacterium phage 40BC], Coverage= 100.0, SubjectRange= 1:128, QueryRange= 1:128, EValue= 1.52642E-80. HHPRED= Accession= 8JOU_i, Description= Virion-associated phage protein; Complex, VIRAL PROTEIN;{Ralstonia phage GP4}, Probability= 100.0. Coverage= 96.875, SubjectRange= 1:140, QueryRange= 1:126. CDD= .

CDS 31687 - 32067
  /gene="29"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_29"
    /note=Original Glimmer call @bp 31687 has strength 23.47; Genemark calls start at 31687
    /note=SSC: Start = 31687, Stop = 32067. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.339 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 381 bp is the longest possible ORF. GAP: 8 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= 40BC, ProteinNumber= 029, Function= function unknown, EValue= 2.0E-67. NCBIBLAST= PhageName= hypothetical protein CG91_gp029 [Mycobacterium phage 39HC] >gb|AHJ88329.1| hypothetical protein 39HC_029 [Mycobacterium phage 39HC] >gb|AHJ88429.1| hypothetical protein 40BC_029 [Mycobacterium phage 40BC], Coverage= 100.0, SubjectRange= 1:126, QueryRange= 1:126, EValue= 2.89139E-80. HHPRED= . CDD= .

CDS 32064 - 32708
  /gene="30"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_30"
    /note=Original Glimmer call @bp 32064 has strength 12.64; Genemark calls start at 32064
    /note=SSC: Start = 32064, Stop = 32708. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.095 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 645 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 030, Function= function unknown, EValue= 1.0E-127. NCBIBLAST= PhageName= hypothetical protein CG90_gp30 [Mycobacterium phage Julie1] >gb|AHJ88530.1| hypothetical protein Jolie1_030 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:214, QueryRange= 1:214, EValue= 4.20649E-155. HHPRED= . CDD= .

CDS 32705 - 33313
  /gene="31"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_31"
    /note=Original Glimmer call @bp 32705 has strength 18.28; Genemark calls start at 32705
    /note=SSC: Start = 32705, Stop = 33313. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.145 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 609 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 031, Function= function unknown, EValue= 1.0E-115. NCBIBLAST= PhageName= hypothetical protein CG90_gp31 [Mycobacterium phage Julie1] >gb|AHJ88531.1| hypothetical protein Jolie1_031 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:202, QueryRange= 1:202, EValue= 1.06326E-144. HHPRED= . CDD= .

CDS 33310 - 34512
  /gene="32"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_32"
    /note=Original Glimmer call @bp 33310 has strength 15.51; Genemark calls start at 33310
    /note=SSC: Start = 33310, Stop = 34512. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.144 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 1203 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 032, Function= function unknown, EValue= 0.0. NCBIBLAST= PhageName= hypothetical protein CG90_gp32 [Mycobacterium phage Julie1] >gb|AHJ88532.1| hypothetical protein Jolie1_032 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:400, QueryRange= 1:400, EValue= 0.0. HHPRED= . CDD= .

CDS 34540 - 34911
  /gene="33"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_33"
    /note=Original Glimmer call @bp 34540 has strength 6.48; Genemark calls start at 34540
    /note=SSC: Start = 34540, Stop = 34911. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.223 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 372 bp is the longest possible ORF. GAP: 27 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 031, Function= function unknown, EValue= 3.0E-68. NCBIBLAST= PhageName= hypothetical protein CG90_gp33 [Mycobacterium phage Julie1] >ref|YP_009009590.1| hypothetical protein CG91_gp033 [Mycobacterium phage 39HC] >ref|YP_009032257.1| hypothetical protein FH38_gp31 [Mycobacterium phage Hosp] >gb|AHJ88433.1| hypothetical protein 40BC_033 [Mycobacterium phage 40BC] >gb|AHJ88333.1| hypothetical protein 39HC_033 [Mycobacterium phage 39HC] >gb|AHJ88533.1| hypothetical protein Jolie1_033 [Mycobacterium phage Julie1] >gb|AHK11985.1| hypothetical protein Hosp_031 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:123, QueryRange= 1:123, EValue= 6.35287E-84. HHPRED= Accession= PF10963.13, Description= Phage_TAC_10 ; Phage tail assembly chaperone, Probability= 96.3. Coverage= 64.2276, SubjectRange= 2:72, QueryRange= 2:107. CDD= .
    /note=interesting HHPRED hit to a tail assembly chaperone, but not enough to call function

CDS 34911 - 35225
  /gene="34"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_34"
    /note=Original Glimmer call @bp 34911 has strength 16.85; Genemark calls start at 34911
    /note=SSC: Start = 34911, Stop = 35225. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 0.401 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 315 bp is not the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 034, Function= function unknown, EValue= 3.0E-55. NCBIBLAST= PhageName= hypothetical protein CG90_gp34 [Mycobacterium phage Julie1] >gb|AHJ88534.1| hypothetical protein Jolie1_034 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:104, QueryRange= 1:104, EValue= 2.22515E-70. HHPRED= . CDD= .
    /note=based on bench evidence mentioned in PDG, calling the -1 start over the -4

CDS 35245 - 35652
  /gene="35"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_35"
    /note=Original Glimmer call @bp 35245 has strength 18.72; Genemark calls start at 35245
    /note=SSC: Start = 35245, Stop = 35652. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.483 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 408 bp is the longest possible ORF. GAP: 19 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 035, Function= function unknown, EValue= 1.0E-70. NCBIBLAST= PhageName= tail fiber protein [Mycobacterium phage Julie1] >ref|YP_009009592.1| tail fiber protein [Mycobacterium phage 39HC] >ref|YP_009032259.1| tail fiber protein [Mycobacterium phage Hosp] >gb|AHJ88435.1| hypothetical protein 40BC_035 [Mycobacterium phage 40BC] >gb|AHJ88335.1| hypothetical protein 39HC_035 [Mycobacterium phage 39HC] >gb|AHJ88535.1| hypothetical protein Jolie1_035 [Mycobacterium phage Julie1] >gb|AHK11987.1| hypothetical protein Hosp_033 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:135, QueryRange= 1:135, EValue= 3.63438E-91. HHPRED= Accession= 9D93_Lb, Description= Minor tail protein; Bacteriophage, tail tip, VIRAL PROTEIN;{Mycobacterium phage Bxb1}, Probability= 87.4. Coverage= 45.1852, SubjectRange= 294:355, QueryRange= 294:135. CDD= .
    /note=could be a minor tail- but not strong enough evidence

CDS 35649 - 36776
  /gene="36"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_36"
    /note=Original Glimmer call @bp 35649 has strength 16.73; Genemark calls start at 35649
    /note=SSC: Start = 35649, Stop = 36776. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 0.829 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 1128 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 036, Function= function unknown, EValue= 0.0. NCBIBLAST= PhageName= minor tail protein [Mycobacterium phage Julie1] >gb|AHJ88536.1| hypothetical protein Jolie1_036 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:375, QueryRange= 1:375, EValue= 0.0. HHPRED= . CDD= .

CDS complement (36779 - 36976)
  /gene="37"
  /product="helix-turn-helix DNA binding domain"
  /function="helix-turn-helix DNA binding domain"
  /locus tag="ForDig_37"
    /note=Original Glimmer call @bp 36976 has strength 14.63; Genemark calls start at 36976
    /note=SSC: Start = 36976, Stop = 36779. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.263 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 198 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: helix-turn-helix DNA binding domain. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 035, Function= function unknown, EValue= 2.0E-33. NCBIBLAST= PhageName= DNA binding protein [Mycobacterium phage Julie1] >ref|YP_009009594.1| DNA binding protein [Mycobacterium phage 39HC] >ref|YP_009032261.1| DNA binding protein [Mycobacterium phage Hosp] >gb|AHJ88437.1| hypothetical protein 40BC_037 [Mycobacterium phage 40BC] >gb|AHJ88337.1| hypothetical protein 39HC_037 [Mycobacterium phage 39HC] >gb|AHJ88537.1| hypothetical protein Jolie1_037 [Mycobacterium phage Julie1] >gb|AHK11989.1| hypothetical protein Hosp_035 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:65, QueryRange= 1:65, EValue= 3.43211E-38. HHPRED= Accession= 8C3T_A, Description= AlpA family phage regulatory protein; excisionase, mobile genetic elements, recombination, DNA BINDING PROTEIN; 2.11A {Achromobacter xylosoxidans NBRC 15126 = ATCC 27061}, Probability= 98.9. Coverage= 83.0769, SubjectRange= 2:59, QueryRange= 2:57. CDD= Accession= COG3311, Coverage= 89.2308, SubjectRange= 1:61, QueryRange= 1:58, EValue= 0.00828189.

CDS complement (36973 - 37407)
  /gene="38"
  /product="helix-turn-helix DNA binding domain"
  /function="helix-turn-helix DNA binding domain"
  /locus tag="ForDig_38"
    /note=Original Glimmer call @bp 37407 has strength 14.93; Genemark calls start at 37407
    /note=SSC: Start = 37407, Stop = 36973. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.201 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 435 bp is not the longest possible ORF. GAP: 64 bp. ST: SS=NA. F: helix-turn-helix DNA binding domain. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 38, Function= function unknown, EValue= 4.0E-79. NCBIBLAST= PhageName= HTH DNA binding protein [Mycobacterium phage KayaCho] >gb|AGT12942.1| hypothetical protein KAYACHO_38 [Mycobacterium phage KayaCho], Coverage= 100.0, SubjectRange= 1:144, QueryRange= 1:144, EValue= 2.3805E-101. HHPRED= Accession= SCOP_d3jxbc_, Description= a.35.1.2 (C:) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]} | CLASS: All alpha proteins, FOLD: lambda repressor-like DNA-binding domains, SUPFAM: lambda repressor-like DNA-binding domains, FAM: Phage repressors, Probability= 97.8. Coverage= 47.2222, SubjectRange= 1:66, QueryRange= 1:89. CDD= Accession= pfam12844, Coverage= 36.8056, SubjectRange= 1:53, QueryRange= 1:78, EValue= 1.61161E-5.

CDS complement (37472 - 38242)
  /gene="39"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_39"
    /note=Original Glimmer call @bp 38242 has strength 16.56; Genemark calls start at 38242
    /note=SSC: Start = 38242, Stop = 37472. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.653 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 771 bp is the longest possible ORF. GAP: 110 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 039, Function= function unknown, EValue= 1.0E-140. NCBIBLAST= PhageName= hypothetical protein CG91_gp039 [Mycobacterium phage 39HC] >gb|AHJ88339.1| hypothetical protein 39HC_039 [Mycobacterium phage 39HC] >gb|AHJ88439.1| hypothetical protein 40BC_039 [Mycobacterium phage 40BC], Coverage= 100.0, SubjectRange= 1:256, QueryRange= 1:256, EValue= 9.40062E-178. HHPRED= . CDD= Accession= pfam19474, Coverage= 13.2812, SubjectRange= 4:37, QueryRange= 4:255, EValue= 1.67802E-10.

CDS 38353 - 39828
  /gene="40"
  /product="lysin A"
  /function="lysin A"
  /locus tag="ForDig_40"
    /note=Original Glimmer call @bp 38314 has strength 18.61; Genemark calls start at 38371
    /note=SSC: Start = 38353, Stop = 39828. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.833 is not the highest start score. SCS: Start is not called by Glimmer and is not called by Genemark. LO: 1476 bp is not the longest possible ORF. GAP: 110 bp. ST: SS=NA. F: lysin A. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 40, Function= lysin A, EValue= 0.0. NCBIBLAST= PhageName= endolysin [Mycobacterium phage Julie1] >gb|AHJ88540.1| lysin A [Mycobacterium phage Julie1], Coverage= 99.5927, SubjectRange= 1:489, QueryRange= 1:491, EValue= 0.0. HHPRED= Accession= 8Q2G_A, Description= Peptidoglycan L-alanyl-D-glutamate endopeptidase; Endolysins, Bacteriophage lytic enzymes, Gram-negative bacteria, Antibacterial therapy, Antimicrobial agents, ANTIBIOTIC, ANTIMICROBIAL PROTEIN; 2.49A {Escherichia phage ECD7}, Probability= 97.1. Coverage= 14.2566, SubjectRange= 57:121, QueryRange= 57:144. CDD= .

CDS 39840 - 40361
  /gene="41"
  /product="holin"
  /function="holin"
  /locus tag="ForDig_41"
    /note=Original Glimmer call @bp 39840 has strength 16.86; Genemark calls start at 39840
    /note=SSC: Start = 39840, Stop = 40361. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.339 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 522 bp is the longest possible ORF. GAP: 11 bp. ST: SS=NA. F: holin. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 041, Function= holin, EValue= 3.0E-92. NCBIBLAST= PhageName= holin [Mycobacterium phage Julie1] >gb|AHJ88541.1| holin [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:173, QueryRange= 1:173, EValue= 5.2587E-116. HHPRED= Accession= PF16081.10, Description= Phage_holin_7_1 ; Mycobacterial 2 TMS Phage Holin (M2 Hol) Family, Probability= 100.0. Coverage= 73.9884, SubjectRange= 1:120, QueryRange= 1:160. CDD= .

CDS 40358 - 41353
  /gene="42"
  /product="lysin B"
  /function="lysin B"
  /locus tag="ForDig_42"
    /note=Original Glimmer call @bp 40358 has strength 17.31; Genemark calls start at 40358
    /note=SSC: Start = 40358, Stop = 41353. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.315 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 996 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: lysin B. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 042, Function= lysin B, EValue= 0.0. NCBIBLAST= PhageName= lysin B [Mycobacterium phage Julie1] >gb|AHJ88542.1| lysin B [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:331, QueryRange= 1:331, EValue= 0.0. HHPRED= Accession= 3AJA_B, Description= Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, hydrolase; 2.9A {Mycobacterium smegmatis}, Probability= 99.9. Coverage= 75.2266, SubjectRange= 39:299, QueryRange= 39:323. CDD= .

CDS complement (41440 - 42075)
  /gene="43"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_43"
    /note=Original Glimmer call @bp 42075 has strength 19.08; Genemark calls start at 42075
    /note=SSC: Start = 42075, Stop = 41440. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.014 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 636 bp is the longest possible ORF. GAP: 39 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 043, Function= function unknown, EValue= 1.0E-116. NCBIBLAST= PhageName= hypothetical protein CG90_gp43 [Mycobacterium phage Julie1] >gb|AHJ88543.1| hypothetical protein Jolie1_043 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:209, QueryRange= 1:211, EValue= 3.05225E-146. HHPRED= . CDD= .

CDS complement (42115 - 43545)
  /gene="44"
  /product="exonuclease"
  /function="exonuclease"
  /locus tag="ForDig_44"
    /note=Original Glimmer call @bp 43545 has strength 19.1; Genemark calls start at 43545
    /note=SSC: Start = 43545, Stop = 42115. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.773 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 1431 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: exonuclease. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 044, Function= function unknown, EValue= 0.0. NCBIBLAST= PhageName= exonuclease [Mycobacterium phage Julie1] >gb|AHJ88544.1| hypothetical protein Jolie1_044 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:476, QueryRange= 1:476, EValue= 0.0. HHPRED= Accession= 1W36_E, Description= EXODEOXYRIBONUCLEASE V BETA CHAIN; RECOMBINATION, HELICASE, NUCLEASE, HYDROLASE, DNA REPAIR; 3.1A {ESCHERICHIA COLI} SCOP: c.37.1.19, c.52.1.24, Probability= 98.2. Coverage= 34.0336, SubjectRange= 948:1172, QueryRange= 948:405. CDD= .

CDS complement (43542 - 43787)
  /gene="45"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_45"
    /note=Original Glimmer call @bp 43769 has strength 17.48; Genemark calls start at 43787
    /note=SSC: Start = 43787, Stop = 43542. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.279 is not the highest start score. SCS: Start is not called by Glimmer and is called by Genemark. LO: 246 bp is the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 043, Function= function unknown, EValue= 2.0E-41. NCBIBLAST= PhageName= hypothetical protein FH38_gp43 [Mycobacterium phage Hosp] >gb|AHK11997.1| hypothetical protein Hosp_043 [Mycobacterium phage Hosp], Coverage= 97.5309, SubjectRange= 2:80, QueryRange= 2:81, EValue= 2.90333E-49. HHPRED= . CDD= .
    /note=despite having better alignment with the 43769 start for the pham, the 33787 start has a 1 bp overlap and coveralls all available coding potential in genemark, which the 43769 start does not.

CDS complement (43787 - 45532)
  /gene="46"
  /product="DNA helicase"
  /function="DNA helicase"
  /locus tag="ForDig_46"
    /note=Original Glimmer call @bp 45532 has strength 20.83; Genemark calls start at 45532
    /note=SSC: Start = 45532, Stop = 43787. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.821 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 1746 bp is not the longest possible ORF. GAP: 131 bp. ST: SS=NA. F: DNA helicase. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 046, Function= type III restriction helicase, EValue= 0.0. NCBIBLAST= PhageName= DNA helicase [Mycobacterium phage Julie1] >gb|AHJ88546.1| type III restriction helicase [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:581, QueryRange= 1:581, EValue= 0.0. HHPRED= Accession= 2OCA_A, Description= ATP-dependent DNA helicase uvsW; ATP-dependant helicase, T4-bacteriophage, Recombination, HYDROLASE; 2.7A {Enterobacteria phage T4}, Probability= 100.0. Coverage= 59.5525, SubjectRange= 112:458, QueryRange= 112:355. CDD= Accession= COG1061, Coverage= 59.8967, SubjectRange= 81:418, QueryRange= 81:358, EValue= 0.0.

CDS complement (45664 - 45828)
  /gene="47"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_47"
    /note=Original Glimmer call @bp 45828 has strength 12.84; Genemark calls start at 45828
    /note=SSC: Start = 45828, Stop = 45664. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.065 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 165 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 047, Function= function unknown, EValue= 2.0E-27. NCBIBLAST= PhageName= hypothetical protein CG90_gp47 [Mycobacterium phage Julie1] >ref|YP_009009603.1| hypothetical protein CG91_gp046 [Mycobacterium phage 39HC] >ref|YP_009032271.1| hypothetical protein FH38_gp45 [Mycobacterium phage Hosp] >gb|AHJ88446.1| hypothetical protein 40BC_046 [Mycobacterium phage 40BC] >gb|AHJ88346.1| hypothetical protein 39HC_046 [Mycobacterium phage 39HC] >gb|AHJ88547.1| hypothetical protein Jolie1_047 [Mycobacterium phage Julie1] >gb|AHK11999.1| hypothetical protein Hosp_045 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:54, QueryRange= 1:54, EValue= 2.85479E-31. HHPRED= . CDD= .

CDS complement (45825 - 46304)
  /gene="48"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_48"
    /note=Original Glimmer call @bp 46304 has strength 22.52; Genemark calls start at 46304
    /note=SSC: Start = 46304, Stop = 45825. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.091 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 480 bp is the longest possible ORF. GAP: 33 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= 40BC, ProteinNumber= 047, Function= function unknown, EValue= 6.0E-61. NCBIBLAST= PhageName= hypothetical protein CG91_gp047 [Mycobacterium phage 39HC] >gb|AHJ88347.1| hypothetical protein 39HC_047 [Mycobacterium phage 39HC] >gb|AHJ88447.1| hypothetical protein 40BC_047 [Mycobacterium phage 40BC], Coverage= 100.0, SubjectRange= 1:159, QueryRange= 1:159, EValue= 1.26352E-77. HHPRED= . CDD= .

CDS complement (46338 - 49187)
  /gene="49"
  /product="DNA primase/helicase"
  /function="DNA primase/helicase"
  /locus tag="ForDig_49"
    /note=Original Glimmer call @bp 49187 has strength 19.74; Genemark calls start at 49187
    /note=SSC: Start = 49187, Stop = 46338. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.601 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 2850 bp is the longest possible ORF. GAP: 37 bp. ST: SS=NA. F: DNA primase/helicase. FS: PHDBLAST= PhageName= 40BC, ProteinNumber= 048, Function= primase/helicase, EValue= 0.0. NCBIBLAST= PhageName= DNA polymerase/primase [Mycobacterium phage 39HC] >gb|AHJ88348.1| primase/helicase [Mycobacterium phage 39HC] >gb|AHJ88448.1| primase/helicase [Mycobacterium phage 40BC], Coverage= 100.0, SubjectRange= 1:963, QueryRange= 1:949, EValue= 0.0. HHPRED= Accession= 1NLF_A, Description= Regulatory protein repA; replicative DNA helicase structural changes, REPLICATION; HET: SO4; 1.95A {Escherichia coli} SCOP: c.37.1.11, Probability= 99.7. Coverage= 24.1307, SubjectRange= 15:255, QueryRange= 15:817. CDD= Accession= cd01125, Coverage= 23.2877, SubjectRange= 1:230, QueryRange= 1:824, EValue= 5.32493E-44.

CDS complement (49225 - 50079)
  /gene="50"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_50"
    /note=Original Glimmer call @bp 50079 has strength 14.25; Genemark calls start at 50079
    /note=SSC: Start = 50079, Stop = 49225. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.762 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 855 bp is the longest possible ORF. GAP: 131 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 048, Function= function unknown, EValue= 1.0E-114. NCBIBLAST= PhageName= hypothetical protein FH38_gp48 [Mycobacterium phage Hosp] >gb|AHK12002.1| hypothetical protein Hosp_048 [Mycobacterium phage Hosp], Coverage= 98.9437, SubjectRange= 1:269, QueryRange= 1:281, EValue= 1.44915E-133. HHPRED= . CDD= .

CDS complement (50211 - 50594)
  /gene="51"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_51"
    /note=Original Glimmer call @bp 50594 has strength 20.32; Genemark calls start at 50594
    /note=SSC: Start = 50594, Stop = 50211. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.091 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 384 bp is the longest possible ORF. GAP: 48 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 049, Function= function unknown, EValue= 1.0E-61. NCBIBLAST= PhageName= site-specific recombination directionality factor RDF [Mycobacterium phage Julie1] >gb|AHJ88551.1| hypothetical protein Jolie1_051 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:127, QueryRange= 1:127, EValue= 4.91998E-70. HHPRED= Accession= 8H1R_F, Description= Uncharacterized lipoprotein YifL; Lipopolysaccharide, Lipoprotein, LptDE, MEMBRANE PROTEIN; HET: PCJ; 2.98A {Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)}, Probability= 96.5. Coverage= 15.748, SubjectRange= 1:21, QueryRange= 1:21. CDD= .

CDS complement (50643 - 52484)
  /gene="52"
  /product="DNA polymerase I"
  /function="DNA polymerase I"
  /locus tag="ForDig_52"
    /note=Original Glimmer call @bp 52484 has strength 21.56; Genemark calls start at 52484
    /note=SSC: Start = 52484, Stop = 50643. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.067 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 1842 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: DNA polymerase I. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 050, Function= DNA polymerase I, EValue= 0.0. NCBIBLAST= PhageName= DNA polymerase I [Mycobacterium phage 39HC] >ref|YP_009032276.1| DNA polymerase I [Mycobacterium phage Hosp] >gb|AHJ88351.1| DNA polymerase I [Mycobacterium phage 39HC] >gb|AHJ88451.1| DNA polymerase I [Mycobacterium phage 40BC] >gb|AHK12004.1| DNA polymerase I [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:613, QueryRange= 1:613, EValue= 0.0. HHPRED= Accession= 6VDE_A, Description= DNA polymerase I; mycobacteria, DNA polymerase, Flap endonuclease, TRANSFERASE; 2.713A {Mycolicibacterium smegmatis}, Probability= 100.0. Coverage= 96.5742, SubjectRange= 320:906, QueryRange= 320:613. CDD= Accession= cd08638, Coverage= 42.7406, SubjectRange= 27:350, QueryRange= 27:582, EValue= 2.94436E-22.

CDS complement (52481 - 52846)
  /gene="53"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_53"
    /note=Original Glimmer call @bp 52846 has strength 14.25; Genemark calls start at 52846
    /note=SSC: Start = 52846, Stop = 52481. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.091 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 366 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 52, Function= function unknown, EValue= 6.0E-65. NCBIBLAST= PhageName= hypothetical protein N846_gp52 [Mycobacterium phage KayaCho] >gb|AGT12956.1| hypothetical protein KAYACHO_52 [Mycobacterium phage KayaCho], Coverage= 100.0, SubjectRange= 1:121, QueryRange= 1:121, EValue= 4.71768E-78. HHPRED= . CDD= .

CDS complement (52843 - 53442)
  /gene="54"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_54"
    /note=Original Glimmer call @bp 53442 has strength 17.16; Genemark calls start at 53442
    /note=SSC: Start = 53442, Stop = 52843. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.196 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 600 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 53, Function= function unknown, EValue= 5.0E-85. NCBIBLAST= PhageName= hypothetical protein N846_gp53 [Mycobacterium phage KayaCho] >gb|AGT12957.1| hypothetical protein KAYACHO_53 [Mycobacterium phage KayaCho], Coverage= 99.4975, SubjectRange= 1:203, QueryRange= 1:198, EValue= 7.11959E-93. HHPRED= . CDD= .

CDS complement (53439 - 53897)
  /gene="55"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_55"
    /note=Original Glimmer call @bp 53897 has strength 19.09; Genemark calls start at 53897
    /note=SSC: Start = 53897, Stop = 53439. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.934 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 459 bp is not the longest possible ORF. GAP: 62 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 055, Function= function unknown, EValue= 4.0E-81. NCBIBLAST= PhageName= hypothetical protein CG90_gp55 [Mycobacterium phage Julie1] >gb|AHJ88555.1| hypothetical protein Jolie1_055 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:152, QueryRange= 1:152, EValue= 2.04492E-94. HHPRED= . CDD= .

CDS complement (53960 - 54190)
  /gene="56"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_56"
    /note=Original Glimmer call @bp 54190 has strength 18.48; Genemark calls start at 54196
    /note=SSC: Start = 54190, Stop = 53960. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.145 is not the highest start score. SCS: Start is called by Glimmer and is not called by Genemark. LO: 231 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 056, Function= function unknown, EValue= 4.0E-39. NCBIBLAST= PhageName= hypothetical protein CG90_gp56 [Mycobacterium phage Julie1] >ref|YP_009032280.1| hypothetical protein FH38_gp54 [Mycobacterium phage Hosp] >gb|AHJ88556.1| hypothetical protein Jolie1_056 [Mycobacterium phage Julie1] >gb|AHK12008.1| hypothetical protein Hosp_054 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:76, QueryRange= 1:76, EValue= 4.53837E-46. HHPRED= . CDD= .

CDS complement (54187 - 54345)
  /gene="57"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_57"
    /note=Original Glimmer call @bp 54348 has strength 20.32; Genemark calls start at 54348
    /note=SSC: Start = 54345, Stop = 54187. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.629 is the highest start score. SCS: Start is not called by Glimmer and is not called by Genemark. LO: 159 bp is not the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 56, Function= function unknown, EValue= 4.0E-24. NCBIBLAST= PhageName= hypothetical protein N846_gp56 [Mycobacterium phage KayaCho] >gb|AGT12960.1| hypothetical protein KAYACHO_56 [Mycobacterium phage KayaCho], Coverage= 100.0, SubjectRange= 2:53, QueryRange= 2:52, EValue= 1.75963E-28. HHPRED= . CDD= .
    /note=changing based on data showing if -4 start and -1 start exist, -1 start is preferred

CDS complement (54345 - 54668)
  /gene="58"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_58"
    /note=Original Glimmer call @bp 54668 has strength 22.05; Genemark calls start at 54668
    /note=SSC: Start = 54668, Stop = 54345. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.176 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 324 bp is the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Zenteno07, ProteinNumber= 66, Function= function unknown, EValue= 6.0E-39. NCBIBLAST= PhageName= hypothetical protein SEA_ZENTENO07_66 [Mycobacterium phage Zenteno07], Coverage= 95.3271, SubjectRange= 1:102, QueryRange= 1:102, EValue= 5.41809E-47. HHPRED= . CDD= .

CDS complement (54668 - 55009)
  /gene="59"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_59"
    /note=Original Glimmer call @bp 55009 has strength 8.05; Genemark calls start at 55009
    /note=SSC: Start = 55009, Stop = 54668. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.836 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 342 bp is the longest possible ORF. GAP: 104 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 58, Function= function unknown, EValue= 4.0E-57. NCBIBLAST= PhageName= hypothetical protein CG90_gp58 [Mycobacterium phage Julie1] >ref|YP_009032282.1| hypothetical protein FH38_gp56 [Mycobacterium phage Hosp] >gb|AHJ88558.1| hypothetical protein Jolie1_058 [Mycobacterium phage Julie1] >gb|AHK12010.1| hypothetical protein Hosp_056 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:107, QueryRange= 1:113, EValue= 7.4882E-62. HHPRED= . CDD= .

CDS complement (55114 - 55467)
  /gene="60"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_60"
    /note=Original Glimmer call @bp 55467 has strength 14.11; Genemark calls start at 55467
    /note=SSC: Start = 55467, Stop = 55114. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 0.983 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 354 bp is the longest possible ORF. GAP: 334 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 59, Function= function unknown, EValue= 2.0E-56. NCBIBLAST= PhageName= hypothetical protein CG91_gp059 [Mycobacterium phage 39HC] >gb|AHJ88359.1| hypothetical protein 39HC_059 [Mycobacterium phage 39HC] >gb|AHJ88459.1| hypothetical protein 40BC_059 [Mycobacterium phage 40BC], Coverage= 100.0, SubjectRange= 1:117, QueryRange= 1:117, EValue= 9.86852E-61. HHPRED= . CDD= .

CDS 55802 - 56566
  /gene="61"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_61"
    /note=Original Glimmer call @bp 55802 has strength 19.7; Genemark calls start at 55802
    /note=SSC: Start = 55802, Stop = 56566. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.242 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 765 bp is the longest possible ORF. GAP: 334 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 058, Function= function unknown, EValue= 1.0E-116. NCBIBLAST= PhageName= hypothetical protein FH38_gp58 [Mycobacterium phage Hosp] >gb|AHK12012.1| hypothetical protein Hosp_058 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:254, QueryRange= 1:254, EValue= 1.52359E-137. HHPRED= . CDD= .

CDS 56642 - 56842
  /gene="62"
  /product="ribbon-helix-helix DNA binding domain"
  /function="ribbon-helix-helix DNA binding domain"
  /locus tag="ForDig_62"
    /note=Original Glimmer call @bp 56660 has strength 8.69; Genemark calls start at 56660
    /note=SSC: Start = 56642, Stop = 56842. (Forward). CP: Does not contain all GeneMarkHost capacity. SD: ZScore 2.515 is not the highest start score. SCS: Start is not called by Glimmer and is not called by Genemark. LO: 201 bp is not the longest possible ORF. GAP: 75 bp. ST: SS=NA. F: ribbon-helix-helix DNA binding domain. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 061, Function= function unknown, EValue= 3.0E-34. NCBIBLAST= PhageName= hypothetical protein CG90_gp61 [Mycobacterium phage Julie1] >ref|YP_009032285.1| hypothetical protein FH38_gp59 [Mycobacterium phage Hosp] >gb|AHJ88561.1| hypothetical protein Jolie1_061 [Mycobacterium phage Julie1] >gb|AHK12013.1| hypothetical protein Hosp_059 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:66, QueryRange= 1:66, EValue= 1.19298E-41. HHPRED= Accession= 1IRQ_A, Description= omega transcriptional repressor; transcriptional repressor, ribbon-helix-helix, GENE REGULATION; 1.5A {Streptococcus pyogenes} SCOP: a.43.1.4, Probability= 98.6. Coverage= 57.5758, SubjectRange= 28:66, QueryRange= 28:41. CDD= .

CDS 56842 - 57066
  /gene="63"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_63"
    /note=Original Glimmer call @bp 56842 has strength 17.09; Genemark calls start at 56842
    /note=SSC: Start = 56842, Stop = 57066. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.934 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 225 bp is not the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 62, Function= function unknown, EValue= 5.0E-33. NCBIBLAST= PhageName= hypothetical protein N846_gp62 [Mycobacterium phage KayaCho] >gb|AGT12966.1| hypothetical protein KAYACHO_62 [Mycobacterium phage KayaCho], Coverage= 100.0, SubjectRange= 1:74, QueryRange= 1:74, EValue= 2.21121E-39. HHPRED= . CDD= .

CDS 57066 - 57248
  /gene="64"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_64"
    /note=Original Glimmer call @bp 57066 has strength 24.48; Genemark calls start at 57066
    /note=SSC: Start = 57066, Stop = 57248. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.849 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 183 bp is the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 63, Function= function unknown, EValue= 4.0E-29. NCBIBLAST= PhageName= hypothetical protein N846_gp63 [Mycobacterium phage KayaCho] >gb|AGT12967.1| hypothetical protein KAYACHO_63 [Mycobacterium phage KayaCho], Coverage= 100.0, SubjectRange= 1:60, QueryRange= 1:60, EValue= 7.66737E-34. HHPRED= . CDD= .

CDS 57245 - 57769
  /gene="65"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_65"
    /note=Original Glimmer call @bp 57245 has strength 10.43; Genemark calls start at 57245
    /note=SSC: Start = 57245, Stop = 57769. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.584 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 525 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 064, Function= function unknown, EValue= 5.0E-94. NCBIBLAST= PhageName= hypothetical protein CG90_gp64 [Mycobacterium phage Julie1] >gb|AHJ88564.1| hypothetical protein Jolie1_064 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:174, QueryRange= 1:174, EValue= 5.71578E-98. HHPRED= Accession= SCOP_d2gmga1, Description= a.4.5.82 (A:10-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]} | CLASS: All alpha proteins, FOLD: DNA/RNA-binding 3-helical bundle, SUPFAM: `Winged helix` DNA-binding domain, FAM: PF0610-like, Probability= 97.3. Coverage= 45.977, SubjectRange= 6:85, QueryRange= 6:158. CDD= .

CDS 57762 - 58007
  /gene="66"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_66"
    /note=Original Glimmer call @bp 57750 has strength 14.67; Genemark calls start at 57750
    /note=SSC: Start = 57762, Stop = 58007. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.495 is not the highest start score. SCS: Start is not called by Glimmer and is not called by Genemark. LO: 246 bp is not the longest possible ORF. GAP: -8 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 065, Function= function unknown, EValue= 2.0E-39. NCBIBLAST= PhageName= hypothetical protein CG90_gp65 [Mycobacterium phage Julie1] >gb|AHJ88565.1| hypothetical protein Jolie1_065 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 5:85, QueryRange= 5:81, EValue= 1.64631E-38. HHPRED= . CDD= .

CDS 58034 - 58732
  /gene="67"
  /product="ribonuclease"
  /function="ribonuclease"
  /locus tag="ForDig_67"
    /note=Original Glimmer call @bp 58034 has strength 8.54; Genemark calls start at 58034
    /note=SSC: Start = 58034, Stop = 58732. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.212 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 699 bp is the longest possible ORF. GAP: 26 bp. ST: SS=NA. F: ribonuclease. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 066, Function= RNaseE, EValue= 1.0E-130. NCBIBLAST= PhageName= Rnase E [Mycobacterium phage Julie1] >ref|YP_009032290.1| Rnase E [Mycobacterium phage Hosp] >gb|AHJ88566.1| RNaseE [Mycobacterium phage Julie1] >gb|AHK12018.1| RNaseE [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:232, QueryRange= 1:232, EValue= 1.15755E-162. HHPRED= Accession= 5XE7_B, Description= ECF RNA polymerase sigma factor SigJ; RNA polymerase subunit, ECF41 sigma factor, DNA binding, SnoaL_2 domain, DNA BINDING PROTEIN; HET: MSE; 2.162A {Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)}, Probability= 97.1. Coverage= 36.2069, SubjectRange= 117:201, QueryRange= 117:98. CDD= .

CDS 58743 - 59336
  /gene="68"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_68"
    /note=Original Glimmer call @bp 58743 has strength 17.22; Genemark calls start at 58743
    /note=SSC: Start = 58743, Stop = 59336. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 0.762 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 594 bp is not the longest possible ORF. GAP: 10 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 67, Function= function unknown, EValue= 2.0E-91. NCBIBLAST= PhageName= hypothetical protein N846_gp67 [Mycobacterium phage KayaCho] >gb|AGT12971.1| hypothetical protein KAYACHO_67 [Mycobacterium phage KayaCho], Coverage= 96.4467, SubjectRange= 1:213, QueryRange= 1:196, EValue= 4.4709E-106. HHPRED= . CDD= .

CDS 59354 - 59602
  /gene="69"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_69"
    /note=Original Glimmer call @bp 59354 has strength 9.6; Genemark calls start at 59354
    /note=SSC: Start = 59354, Stop = 59602. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.556 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 249 bp is not the longest possible ORF. GAP: 17 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 068, Function= function unknown, EValue= 1.0E-42. NCBIBLAST= PhageName= hypothetical protein CG90_gp68 [Mycobacterium phage Julie1] >ref|YP_009032292.1| hypothetical protein FH38_gp66 [Mycobacterium phage Hosp] >gb|AHJ88568.1| hypothetical protein Jolie1_068 [Mycobacterium phage Julie1] >gb|AHK12020.1| hypothetical protein Hosp_066 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:82, QueryRange= 1:82, EValue= 1.24558E-51. HHPRED= . CDD= .

CDS 59595 - 59903
  /gene="70"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_70"
    /note=Original Glimmer call @bp 59595 has strength 18.19; Genemark calls start at 59595
    /note=SSC: Start = 59595, Stop = 59903. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.173 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 309 bp is the longest possible ORF. GAP: -8 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 067, Function= function unknown, EValue= 2.0E-51. NCBIBLAST= PhageName= hypothetical protein FH38_gp67 [Mycobacterium phage Hosp] >gb|AHK12021.1| hypothetical protein Hosp_067 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:102, QueryRange= 1:102, EValue= 2.39917E-62. HHPRED= . CDD= .

CDS 59900 - 60583
  /gene="71"
  /product="DNA binding protein"
  /function="DNA binding protein"
  /locus tag="ForDig_71"
    /note=Original Glimmer call @bp 59900 has strength 14.19; Genemark calls start at 59900
    /note=SSC: Start = 59900, Stop = 60583. (Forward). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.025 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 684 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: DNA binding protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 070, Function= function unknown, EValue= 1.0E-117. NCBIBLAST= PhageName= hypothetical protein CG90_gp70 [Mycobacterium phage Julie1] >gb|AHJ88570.1| hypothetical protein Jolie1_070 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:226, QueryRange= 1:227, EValue= 4.99974E-145. HHPRED= Accession= PF07638.16, Description= Sigma70_ECF ; ECF sigma factor, Probability= 98.0. Coverage= 28.1938, SubjectRange= 121:182, QueryRange= 121:90. CDD= .

CDS 60610 - 60795
  /gene="72"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_72"
    /note=Original Glimmer call @bp 60610 has strength 8.67; Genemark calls start at 60610
    /note=SSC: Start = 60610, Stop = 60795. (Forward). CP: Does not contain all GeneMarkHost capacity. SD: ZScore 2.034 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 186 bp is not the longest possible ORF. GAP: 26 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Imvubu, ProteinNumber= 77, Function= function unknown, EValue= 2.0E-20. NCBIBLAST= PhageName= hypothetical protein SEA_ZENTENO07_86 [Mycobacterium phage Zenteno07], Coverage= 93.4426, SubjectRange= 34:90, QueryRange= 34:57, EValue= 2.2309E-21. HHPRED= . CDD= .
    /note=start does not call all coding potential- but next start call is an overlap of 94 bp.

CDS complement (60931 - 61257)
  /gene="73"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_73"
    /note=Original Glimmer call @bp 61257 has strength 9.7; Genemark calls start at 61257
    /note=SSC: Start = 61257, Stop = 60931. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.465 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 327 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 070, Function= function unknown, EValue= 3.0E-32. NCBIBLAST= PhageName= hypothetical protein CG90_gp72 [Mycobacterium phage Julie1] >gb|AHJ88572.1| hypothetical protein Jolie1_072 [Mycobacterium phage Julie1], Coverage= 82.4074, SubjectRange= 1:100, QueryRange= 1:89, EValue= 2.38048E-35. HHPRED= . CDD= .

CDS complement (61254 - 61622)
  /gene="74"
  /product="HNH endonuclease"
  /function="HNH endonuclease"
  /locus tag="ForDig_74"
    /note=Original Glimmer call @bp 61622 has strength 9.17; Genemark calls start at 61622
    /note=SSC: Start = 61622, Stop = 61254. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.934 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 369 bp is not the longest possible ORF. GAP: -8 bp. ST: SS=NA. F: HNH endonuclease. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 73, Function= HNH endonuclease, EValue= 1.0E-64. NCBIBLAST= PhageName= HNH endonuclease [Mycobacterium phage 39HC] >gb|AHJ88375.1| HNH endonuclease [Mycobacterium phage 39HC] >gb|AHJ88475.1| HNH endonuclease [Mycobacterium phage 40BC], Coverage= 100.0, SubjectRange= 1:122, QueryRange= 1:122, EValue= 9.67103E-75. HHPRED= Accession= 7ENH_A, Description= CRISPR-associated endonuclease Cas9; Inhibitor, Complex, VIRAL PROTEIN; HET: NI; 2.097A {Staphylococcus aureus}, Probability= 97.4. Coverage= 64.7541, SubjectRange= 35:111, QueryRange= 35:86. CDD= Accession= cd00085, Coverage= 35.2459, SubjectRange= 14:55, QueryRange= 14:78, EValue= 2.98092E-4.

CDS complement (61615 - 61830)
  /gene="75"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_75"
    /note=Original Glimmer call @bp 61830 has strength 18.16; Genemark calls start at 61830
    /note=SSC: Start = 61830, Stop = 61615. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.495 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 216 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= 40BC, ProteinNumber= 076, Function= function unknown, EValue= 7.0E-37. NCBIBLAST= PhageName= hypothetical protein N846_gp74 [Mycobacterium phage KayaCho] >ref|YP_009009633.1| hypothetical protein CG91_gp076 [Mycobacterium phage 39HC] >gb|AGT12978.1| hypothetical protein KAYACHO_74 [Mycobacterium phage KayaCho] >gb|AHJ88376.1| hypothetical protein 39HC_076 [Mycobacterium phage 39HC] >gb|AHJ88476.1| hypothetical protein 40BC_076 [Mycobacterium phage 40BC], Coverage= 100.0, SubjectRange= 1:71, QueryRange= 1:71, EValue= 4.39695E-45. HHPRED= . CDD= .

CDS complement (61827 - 61973)
  /gene="76"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_76"
    /note=Original Glimmer call @bp 61940 has strength 8.29; Genemark calls start at 61973
    /note=SSC: Start = 61973, Stop = 61827. (Reverse). CP: Does not contain all GeneMarkHost capacity. SD: ZScore 1.465 is not the highest start score. SCS: Start is not called by Glimmer and is called by Genemark. LO: 147 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Cooper, ProteinNumber= 77, Function= function unknown, EValue= 2.0E-16. NCBIBLAST= PhageName= hypothetical protein ADAWI_76 [Mycobacterium phage Adawi] >gb|AGU91989.1| hypothetical protein ADAWI_76 [Mycobacterium phage Adawi], Coverage= 91.6667, SubjectRange= 1:44, QueryRange= 1:44, EValue= 2.47729E-16. HHPRED= . CDD= .

CDS complement (61970 - 62185)
  /gene="77"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_77"
    /note=Original Glimmer call @bp 62185 has strength 1.85
    /note=SSC: Start = 62185, Stop = 61970. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.05 is not the highest start score. SCS: Start is called by Glimmer and is not called by Genemark. LO: 216 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 076, Function= function unknown, EValue= 3.0E-29. NCBIBLAST= PhageName= hypothetical protein CG90_gp76 [Mycobacterium phage Julie1] >ref|YP_009032300.1| hypothetical protein FH38_gp74 [Mycobacterium phage Hosp] >gb|AHJ88576.1| hypothetical protein Jolie1_076 [Mycobacterium phage Julie1] >gb|AHK12028.1| hypothetical protein Hosp_074 [Mycobacterium phage Hosp], Coverage= 85.9155, SubjectRange= 1:58, QueryRange= 1:61, EValue= 1.44138E-23. HHPRED= . CDD= .
    /note=genemark does show some coding potential- just not sustained at a high level

CDS complement (62182 - 62412)
  /gene="78"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_78"
    /note=Original Glimmer call @bp 62412 has strength 12.64; Genemark calls start at 62412
    /note=SSC: Start = 62412, Stop = 62182. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.629 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 231 bp is the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 77, Function= function unknown, EValue= 3.0E-32. NCBIBLAST= PhageName= hypothetical protein N846_gp77 [Mycobacterium phage KayaCho] >gb|AGT12981.1| hypothetical protein KAYACHO_77 [Mycobacterium phage KayaCho], Coverage= 97.3684, SubjectRange= 1:74, QueryRange= 1:74, EValue= 1.12807E-36. HHPRED= . CDD= .

CDS complement (62412 - 62558)
  /gene="79"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_79"
    /note=Original Glimmer call @bp 62558 has strength 18.97; Genemark calls start at 62558
    /note=SSC: Start = 62558, Stop = 62412. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.417 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 147 bp is the longest possible ORF. GAP: 72 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 078, Function= function unknown, EValue= 2.0E-20. NCBIBLAST= PhageName= hypothetical protein CG90_gp78 [Mycobacterium phage Julie1] >gb|AHJ88578.1| hypothetical protein Jolie1_078 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:48, QueryRange= 1:48, EValue= 1.65322E-25. HHPRED= . CDD= .

CDS complement (62631 - 62975)
  /gene="80"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_80"
    /note=Original Glimmer call @bp 62984 has strength 10.21; Genemark calls start at 62975
    /note=SSC: Start = 62975, Stop = 62631. (Reverse). CP: Does not contain all GeneMarkHost capacity. SD: ZScore 2.53 is not the highest start score. SCS: Start is not called by Glimmer and is called by Genemark. LO: 345 bp is not the longest possible ORF. GAP: -1 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 077, Function= function unknown, EValue= 4.0E-44. NCBIBLAST= PhageName= hypothetical protein FH38_gp77 [Mycobacterium phage Hosp] >gb|AHK12031.1| hypothetical protein Hosp_077 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 4:105, QueryRange= 4:114, EValue= 4.91223E-48. HHPRED= . CDD= .

CDS complement (62975 - 63250)
  /gene="81"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_81"
    /note=Original Glimmer call @bp 63250 has strength 9.42; Genemark calls start at 63250
    /note=SSC: Start = 63250, Stop = 62975. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.934 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 276 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 080, Function= function unknown, EValue= 8.0E-33. NCBIBLAST= PhageName= hypothetical protein CG90_gp80 [Mycobacterium phage Julie1] >gb|AHJ88580.1| hypothetical protein Jolie1_080 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:90, QueryRange= 1:91, EValue= 7.05091E-37. HHPRED= . CDD= .

CDS complement (63247 - 63585)
  /gene="82"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_82"
    /note=Original Glimmer call @bp 63585 has strength 13.98; Genemark calls start at 63585
    /note=SSC: Start = 63585, Stop = 63247. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.574 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 339 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= 40BC, ProteinNumber= 084, Function= function unknown, EValue= 2.0E-59. NCBIBLAST= PhageName= hypothetical protein CG91_gp084 [Mycobacterium phage 39HC] >gb|AHJ88384.1| hypothetical protein 39HC_084 [Mycobacterium phage 39HC] >gb|AHJ88484.1| hypothetical protein 40BC_084 [Mycobacterium phage 40BC], Coverage= 100.0, SubjectRange= 1:113, QueryRange= 1:112, EValue= 5.49859E-71. HHPRED= . CDD= .

CDS complement (63582 - 64067)
  /gene="83"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_83"
    /note=Original Glimmer call @bp 64067 has strength 16.44; Genemark calls start at 64067
    /note=SSC: Start = 64067, Stop = 63582. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.025 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 486 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 082, Function= function unknown, EValue= 1.0E-91. NCBIBLAST= PhageName= hypothetical protein CG90_gp82 [Mycobacterium phage Julie1] >gb|AHJ88582.1| hypothetical protein Jolie1_082 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:161, QueryRange= 1:161, EValue= 2.16862E-109. HHPRED= . CDD= .

CDS complement (64064 - 64336)
  /gene="84"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_84"
    /note=Original Glimmer call @bp 64336 has strength 14.03; Genemark calls start at 64336
    /note=SSC: Start = 64336, Stop = 64064. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.574 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 273 bp is the longest possible ORF. GAP: 264 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 083, Function= function unknown, EValue= 9.0E-42. NCBIBLAST= PhageName= hypothetical protein CG90_gp83 [Mycobacterium phage Julie1] >gb|AHJ88583.1| hypothetical protein Jolie1_083 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:90, QueryRange= 1:90, EValue= 2.35246E-49. HHPRED= . CDD= .

CDS complement (64601 - 64822)
  /gene="85"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_85"
    /note=Original Glimmer call @bp 64822 has strength 19.85; Genemark calls start at 64822
    /note=SSC: Start = 64822, Stop = 64601. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.172 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 222 bp is the longest possible ORF. GAP: 62 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 083, Function= function unknown, EValue= 2.0E-32. NCBIBLAST= PhageName= hypothetical protein CG91_gp088 [Mycobacterium phage 39HC] >gb|AHJ88388.1| hypothetical protein 39HC_088 [Mycobacterium phage 39HC] >gb|AHJ88488.1| hypothetical protein 40BC_088 [Mycobacterium phage 40BC], Coverage= 100.0, SubjectRange= 1:73, QueryRange= 1:73, EValue= 8.41842E-32. HHPRED= . CDD= .

CDS complement (64885 - 65091)
  /gene="86"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_86"
    /note=
    /note=SSC: Start = 65091, Stop = 64885. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.444 is not the highest start score. SCS: Start is not called by Glimmer and is not called by Genemark. LO: 207 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= 40BC, ProteinNumber= 089, Function= function unknown, EValue= 6.0E-36. NCBIBLAST= PhageName= hypothetical protein CG91_gp089 [Mycobacterium phage 39HC] >gb|AHJ88389.1| hypothetical protein 39HC_089 [Mycobacterium phage 39HC] >gb|AHJ88489.1| hypothetical protein 40BC_089 [Mycobacterium phage 40BC], Coverage= 100.0, SubjectRange= 1:68, QueryRange= 1:68, EValue= 8.20866E-40. HHPRED= . CDD= .

CDS complement (65088 - 65342)
  /gene="87"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_87"
    /note=Original Glimmer call @bp 65285 has strength 9.99; Genemark calls start at 65285
    /note=SSC: Start = 65342, Stop = 65088. (Reverse). CP: Does not contain all GeneMarkHost capacity. SD: ZScore 2.437 is not the highest start score. SCS: Start is not called by Glimmer and is not called by Genemark. LO: 255 bp is the longest possible ORF. GAP: 0 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= 40BC, ProteinNumber= 090, Function= function unknown, EValue= 4.0E-32. NCBIBLAST= PhageName= HNH endonuclease [Mycobacterium phage 39HC] >ref|YP_009032311.1| HNH endonuclease [Mycobacterium phage Hosp] >gb|AHJ88390.1| hypothetical protein 39HC_090 [Mycobacterium phage 39HC] >gb|AHJ88490.1| hypothetical protein 40BC_090 [Mycobacterium phage 40BC] >gb|AHK12039.1| hypothetical protein Hosp_085 [Mycobacterium phage Hosp], Coverage= 77.381, SubjectRange= 1:65, QueryRange= 1:84, EValue= 7.42382E-38. HHPRED= . CDD= .
    /note=coding potential beyond what was called in genemark

CDS complement (65343 - 65564)
  /gene="88"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_88"
    /note=Original Glimmer call @bp 65567 has strength 20.79; Genemark calls start at 65567
    /note=SSC: Start = 65564, Stop = 65343. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.351 is not the highest start score. SCS: Start is not called by Glimmer and is not called by Genemark. LO: 222 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 088, Function= function unknown, EValue= 6.0E-33. NCBIBLAST= PhageName= hypothetical protein CG90_gp88 [Mycobacterium phage Julie1] >gb|AHJ88588.1| hypothetical protein Jolie1_088 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:73, QueryRange= 1:73, EValue= 1.66574E-40. HHPRED= . CDD= .

CDS complement (65561 - 66193)
  /gene="89"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_89"
    /note=Original Glimmer call @bp 66193 has strength 14.85; Genemark calls start at 66193
    /note=SSC: Start = 66193, Stop = 65561. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.091 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 633 bp is not the longest possible ORF. GAP: -8 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 087, Function= function unknown, EValue= 1.0E-103. NCBIBLAST= PhageName= hypothetical protein CG90_gp89 [Mycobacterium phage Julie1] >gb|AHJ88589.1| hypothetical protein Jolie1_089 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:224, QueryRange= 1:210, EValue= 3.47668E-103. HHPRED= . CDD= .

CDS complement (66186 - 67112)
  /gene="90"
  /product="PE/PPE family protein"
  /function="PE/PPE family protein"
  /locus tag="ForDig_90"
    /note=Original Glimmer call @bp 67112 has strength 18.76; Genemark calls start at 67112
    /note=SSC: Start = 67112, Stop = 66186. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.493 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 927 bp is the longest possible ORF. GAP: 96 bp. ST: SS=NA. F: PE/PPE family protein. FS: PHDBLAST= PhageName= KayaCho, ProteinNumber= 88, Function= PE/PPE family protein, EValue= 1.0E-165. NCBIBLAST= PhageName= DNA binding protein [Mycobacterium phage 39HC] >ref|YP_009032314.1| DNA binding protein [Mycobacterium phage Hosp] >gb|AHJ88393.1| PE/PPE-like protein [Mycobacterium phage 39HC] >gb|AHJ88493.1| PE/PPE-like protein [Mycobacterium phage 40BC] >gb|AHK12042.1| PE/PPE-like protein [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:304, QueryRange= 1:308, EValue= 0.0. HHPRED= Accession= PF08237.16, Description= PE-PPE ; PE-PPE domain, Probability= 100.0. Coverage= 63.6364, SubjectRange= 2:219, QueryRange= 2:262. CDD= .

CDS complement (67209 - 67574)
  /gene="91"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_91"
    /note=Original Glimmer call @bp 67502 has strength 23.4; Genemark calls start at 67502
    /note=SSC: Start = 67574, Stop = 67209. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 1.84 is not the highest start score. SCS: Start is not called by Glimmer and is not called by Genemark. LO: 366 bp is the longest possible ORF. GAP: 122 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= . NCBIBLAST= PhageName= hypothetical protein CG91_gp094 [Mycobacterium phage 39HC] >ref|YP_009032315.1| hypothetical protein FH38_gp89 [Mycobacterium phage Hosp] >gb|AHJ88394.1| hypothetical protein 39HC_094 [Mycobacterium phage 39HC] >gb|AHK12043.1| hypothetical protein Hosp_089 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:121, QueryRange= 1:121, EValue= 9.11587E-73. HHPRED= . CDD= .

CDS complement (67697 - 68734)
  /gene="92"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_92"
    /note=Original Glimmer call @bp 68734 has strength 21.34; Genemark calls start at 68734
    /note=SSC: Start = 68734, Stop = 67697. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.172 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 1038 bp is not the longest possible ORF. GAP: 99 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 092, Function= function unknown, EValue= 0.0. NCBIBLAST= PhageName= hypothetical protein CG90_gp92 [Mycobacterium phage Julie1] >gb|AHJ88592.1| hypothetical protein Jolie1_092 [Mycobacterium phage Julie1], Coverage= 99.7101, SubjectRange= 1:344, QueryRange= 1:344, EValue= 0.0. HHPRED= Accession= PF06067.16, Description= DUF932 ; Domain of unknown function (DUF932), Probability= 99.9. Coverage= 71.0145, SubjectRange= 1:219, QueryRange= 1:334. CDD= Accession= pfam06067, Coverage= 68.4058, SubjectRange= 1:225, QueryRange= 1:324, EValue= 0.0.
    /note=called start is highly conserved, but is not the LORF and leaves a larger gap. LORF also starts with a TTG

CDS complement (68834 - 68986)
  /gene="93"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_93"
    /note=Original Glimmer call @bp 68986 has strength 15.11; Genemark calls start at 68986
    /note=SSC: Start = 68986, Stop = 68834. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.145 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 153 bp is not the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 091, Function= function unknown, EValue= 9.0E-21. NCBIBLAST= PhageName= hypothetical protein CG91_gp096 [Mycobacterium phage 39HC] >ref|YP_009032317.1| hypothetical protein FH38_gp91 [Mycobacterium phage Hosp] >gb|AHJ88396.1| hypothetical protein 39HC_096 [Mycobacterium phage 39HC] >gb|AHJ88496.1| hypothetical protein 40BC_096 [Mycobacterium phage 40BC] >gb|AHK12045.1| hypothetical protein Hosp_091 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:50, QueryRange= 1:50, EValue= 1.75443E-22. HHPRED= Accession= PF13209.11, Description= DUF4017 ; Protein of unknown function (DUF4017), Probability= 90.5. Coverage= 88.0, SubjectRange= 8:52, QueryRange= 8:49. CDD= .

CDS complement (68983 - 69345)
  /gene="94"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_94"
    /note=Original Glimmer call @bp 69345 has strength 16.04; Genemark calls start at 69345
    /note=SSC: Start = 69345, Stop = 68983. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.212 is not the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 363 bp is the longest possible ORF. GAP: -4 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 094, Function= function unknown, EValue= 3.0E-68. NCBIBLAST= PhageName= hypothetical protein CG90_gp94 [Mycobacterium phage Julie1] >gb|AHJ88594.1| hypothetical protein Jolie1_094 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:120, QueryRange= 1:120, EValue= 2.09926E-82. HHPRED= Accession= PF09629.15, Description= YorP ; YorP protein, Probability= 95.0. Coverage= 37.5, SubjectRange= 9:64, QueryRange= 9:118. CDD= .

CDS complement (69342 - 69545)
  /gene="95"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_95"
    /note=Original Glimmer call @bp 69545 has strength 16.19; Genemark calls start at 69545
    /note=SSC: Start = 69545, Stop = 69342. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 2.584 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 204 bp is the longest possible ORF. GAP: 2 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 093, Function= function unknown, EValue= 4.0E-33. NCBIBLAST= PhageName= hypothetical protein CG91_gp098 [Mycobacterium phage 39HC] >ref|YP_009032319.1| hypothetical protein FH38_gp93 [Mycobacterium phage Hosp] >gb|AHJ88398.1| hypothetical protein 39HC_098 [Mycobacterium phage 39HC] >gb|AHJ88498.1| hypothetical protein 40BC_098 [Mycobacterium phage 40BC] >gb|AHK12047.1| hypothetical protein Hosp_093 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:67, QueryRange= 1:67, EValue= 9.29355E-38. HHPRED= Accession= PF21978.1, Description= SEHBP ; Transcriptional regulator SEHBP, Probability= 77.0. Coverage= 35.8209, SubjectRange= 7:36, QueryRange= 7:62. CDD= .

CDS complement (69548 - 69868)
  /gene="96"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_96"
    /note=Original Glimmer call @bp 69868 has strength 19.14; Genemark calls start at 69868
    /note=SSC: Start = 69868, Stop = 69548. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.251 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 321 bp is not the longest possible ORF. GAP: 119 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Jolie1, ProteinNumber= 097, Function= function unknown, EValue= 2.0E-54. NCBIBLAST= PhageName= hypothetical protein CG90_gp97 [Mycobacterium phage Julie1] >gb|AHJ88597.1| hypothetical protein Jolie1_097 [Mycobacterium phage Julie1], Coverage= 100.0, SubjectRange= 1:106, QueryRange= 1:106, EValue= 2.61493E-69. HHPRED= Accession= 2K24_A, Description= Putative uncharacterized protein Ta0956; AUTOMATION, FAPSY, MOAD, MOLYBDOPTERIN, UNKNOWN FUNCTION; NMR {Thermoplasma acidophilum}, Probability= 80.9. Coverage= 42.4528, SubjectRange= 66:107, QueryRange= 66:77. CDD= .
    /note=LORF would be a TTG start, and does not show coding potential. ORF selected shows all coding potential.

CDS complement (69988 - 70596)
  /gene="97"
  /product="Hypothetical Protein"
  /function="Hypothetical Protein"
  /locus tag="ForDig_97"
    /note=Original Glimmer call @bp 70596 has strength 20.14; Genemark calls start at 70596
    /note=SSC: Start = 70596, Stop = 69988. (Reverse). CP: Does contain all GeneMarkHost capacity. SD: ZScore 3.091 is the highest start score. SCS: Start is called by Glimmer and is called by Genemark. LO: 609 bp is not the longest possible ORF. GAP: 0 bp. ST: SS=NA. F: Hypothetical Protein. FS: PHDBLAST= PhageName= Hosp, ProteinNumber= 095, Function= function unknown, EValue= 1.0E-109. NCBIBLAST= PhageName= hypothetical protein CG91_gp100 [Mycobacterium phage 39HC] >ref|YP_009032321.1| hypothetical protein FH38_gp95 [Mycobacterium phage Hosp] >gb|AHJ88400.1| hypothetical protein 39HC_0100 [Mycobacterium phage 39HC] >gb|AHJ88500.1| hypothetical protein 40BC_0100 [Mycobacterium phage 40BC] >gb|AHK12049.1| hypothetical protein Hosp_095 [Mycobacterium phage Hosp], Coverage= 100.0, SubjectRange= 1:202, QueryRange= 1:202, EValue= 3.23533E-134. HHPRED= . CDD= .