CDS 1 - 603
  /gene="1"
  /product="gp1"
  /function="hypothetical protein"
  /locus tag="Linayshia_1"
    /note=Original Glimmer call @bp 1 has strength 11.76; Genemark calls start at 1
    /note=SSC: 1-603 CP: yes SCS: both ST: SS BLAST-Start: [terminase small subunit [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 1.01455E-141 GAP: 0 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.693, -3.200406812432904, yes F: hypothetical protein SIF-BLAST: ,,[terminase small subunit [Microbacterium phage Rasovi] ],,QJD49978,100.0,1.01455E-141 SIF-HHPRED: a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic},,,d1ijwc_,20.0,98.0 SIF-Syn: Found upstream of terminase subunit of Htur.

CDS 600 - 872
  /gene="2"
  /product="gp2"
  /function="hypothetical protein"
  /locus tag="Linayshia_2"
    /note=Original Glimmer call @bp 600 has strength 10.73; Genemark calls start at 600
    /note=SSC: 600-872 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_2 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 1.55994E-58 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.139, -4.9668027763900575, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_2 [Microbacterium phage Rasovi] ],,QJD49979,100.0,1.55994E-58 SIF-HHPRED:  SIF-Syn: NKF

CDS 869 - 2281
  /gene="3"
  /product="gp3"
  /function="terminase, large subunit"
  /locus tag="Linayshia_3"
    /note=Original Glimmer call @bp 869 has strength 15.77; Genemark calls start at 869
    /note=SSC: 869-2281 CP: yes SCS: both ST: SS BLAST-Start: [terminase large subunit [Microbacterium phage Rasovi]],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.157, -7.224343665540421, no F: terminase, large subunit SIF-BLAST: ,,[terminase large subunit [Microbacterium phage Rasovi]],,QJD49980,100.0,0.0 SIF-HHPRED: Large subunit terminase; large terminase, VIRAL PROTEIN; 2.2A {Deep-sea thermophilic phage D6E},,,5OE8_A,90.8511,100.0 SIF-Syn: Found upstream portal protein
    /note=Current Gene Number: Gene 3
    /note=Did the start site stay the same or change: Stayed the same
    /note=Do the Glimmer and Genemark start sites agree? Yes
    /note=What about Starterator? Yes
    /note=Is the ORF chosen the longest ORF: yes
    /note=Is all of the coding potential captured on GeneMark file: yes
    /note=Is there a 1:1 alignment on blast and with which phage? Yes, Rasovi
    /note=Z score = 1.157
    /note=Detailed reasoning / evidence of why you either changed or kept the auto-annotated start site. 
    /note=
    /note=FUNCTION 
    /note=Synteny:  
    /note=Phagesdb blast- For any potential functional match, the E value should be 10^-7 or less: 
    /note=Blast NCBI function match with E value should be 10^-7 or less: 
    /note=HHPRED Match with > 90% probability: 
    /note=Conserved Domain:

CDS 2347 - 4128
  /gene="4"
  /product="gp4"
  /function="Portal Protein"
  /locus tag="Linayshia_4"
    /note=Original Glimmer call @bp 2347 has strength 12.66; Genemark calls start at 2347
    /note=SSC: 2347-4128 CP: yes SCS: both ST: SS BLAST-Start: [portal protein [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 0.0 GAP: 65 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.263, -1.9310779259753799, yes F: Portal Protein SIF-BLAST: ,,[portal protein [Microbacterium phage Htur]],,XEN15904,100.0,0.0 SIF-HHPRED: Portal protein; complex, phage, sapi, portal, STRUCTURAL PROTEIN; 2.4A {Staphylococcus phage 80alpha},,,8V8B_A,91.5683,99.9 SIF-Syn: Found upstream VIP2-like ADP-ribosyl transferase protein of Htur

CDS 4132 - 7062
  /gene="5"
  /product="gp5"
  /function="VIP2-like ADP-ribosyltransferase toxin"
  /locus tag="Linayshia_5"
    /note=Original Glimmer call @bp 4132 has strength 16.33; Genemark calls start at 4132
    /note=SSC: 4132-7062 CP: yes SCS: both ST: SS BLAST-Start: [VIP2-like ADP-ribosyltransferase toxin [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 0.0 GAP: 3 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.869, -2.7653702713535186, no F: VIP2-like ADP-ribosyltransferase toxin SIF-BLAST: ,,[VIP2-like ADP-ribosyltransferase toxin [Microbacterium phage Htur]],,XEN15905,99.6926,0.0 SIF-HHPRED: Phage_min_cap2 ; Phage minor capsid protein 2,,,PF06152.14,35.5533,100.0 SIF-Syn: Found downstream from portal protein of Htur

CDS complement (7064 - 7276)
  /gene="6"
  /product="gp6"
  /function="hypothetical protein"
  /locus tag="Linayshia_6"
    /note=Original Glimmer call @bp 7276 has strength 19.46; Genemark calls start at 7276
    /note=SSC: 7276-7064 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_ZANELLA_6 [Microbacterium phage Zanella] ],,NCBI, q1:s1 100.0% 6.92404E-41 GAP: 31 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.893, -5.186767100221219, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_ZANELLA_6 [Microbacterium phage Zanella] ],,QGH80664,98.5714,6.92404E-41 SIF-HHPRED:  SIF-Syn: NKF

CDS complement (7308 - 7646)
  /gene="7"
  /product="gp7"
  /function="hypothetical protein"
  /locus tag="Linayshia_7"
    /note=Original Glimmer call @bp 7646 has strength 10.6; Genemark calls start at 7646
    /note=SSC: 7646-7308 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_7 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 1.36797E-71 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.826, -5.118496131986725, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_7 [Microbacterium phage Rasovi] ],,QJD49984,97.3214,1.36797E-71 SIF-HHPRED:  SIF-Syn: NKF

CDS complement (7639 - 8010)
  /gene="8"
  /product="gp8"
  /function="hypothetical protein"
  /locus tag="Linayshia_8"
    /note=Original Glimmer call @bp 8010 has strength 11.91; Genemark calls start at 8010
    /note=SSC: 8010-7639 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_8 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 7.92907E-80 GAP: 407 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.869, -2.9063687850157054, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_8 [Microbacterium phage Rasovi] ],,QJD49985,98.374,7.92907E-80 SIF-HHPRED:  SIF-Syn: NKF

CDS 8418 - 9029
  /gene="9"
  /product="gp9"
  /function="scaffolding protein"
  /locus tag="Linayshia_9"
    /note=Original Glimmer call @bp 8418 has strength 16.9; Genemark calls start at 8418
    /note=SSC: 8418-9029 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_9 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 4.50282E-142 GAP: 407 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.538, -5.938885535067504, no F: scaffolding protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_9 [Microbacterium phage Rasovi] ],,QJD49986,100.0,4.50282E-142 SIF-HHPRED: Scaffold protein; major capsid protein, HK97-like fold, scaffolding protein, procapsid, VIRUS; 3.72A {Staphylococcus phage 80alpha},,,6B0X_b,63.0542,89.9 SIF-Syn: Found downstream major capsid protein of Htur

CDS 9048 - 9905
  /gene="10"
  /product="gp10"
  /function="major capsid protein"
  /locus tag="Linayshia_10"
    /note=Original Glimmer call @bp 9048 has strength 16.32; Genemark calls start at 9048
    /note=SSC: 9048-9905 CP: yes SCS: both ST: SS BLAST-Start: [major capsid protein [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 0.0 GAP: 18 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.375, -3.8137921535956054, no F: major capsid protein SIF-BLAST: ,,[major capsid protein [Microbacterium phage Rasovi] ],,QJD49987,99.6491,0.0 SIF-HHPRED: MAJOR CAPSID PROTEIN; VIRUS, MARINE VIRUS, OUTER CAPSID PROTEIN, MATURATION; 4.7A {SYNECHOCOCCUS PHAGE SYN5},,,4BML_F,94.7368,99.8 SIF-Syn: Found downstream from scaffolding protein as in Htur.

CDS 9907 - 10509
  /gene="11"
  /product="gp11"
  /function="hypothetical protein"
  /locus tag="Linayshia_11"
    /note=Original Glimmer call @bp 9907 has strength 10.52; Genemark calls start at 9907
    /note=SSC: 9907-10509 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_11 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 1.28264E-131 GAP: 1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.102, -4.4536196888290105, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_11 [Microbacterium phage Rasovi] ],,QJD49988,99.0,1.28264E-131 SIF-HHPRED:  SIF-Syn: NKF

CDS 10577 - 11056
  /gene="12"
  /product="gp12"
  /function="head-to-tail adaptor"
  /locus tag="Linayshia_12"
    /note=Original Glimmer call @bp 10577 has strength 10.37; Genemark calls start at 10577
    /note=SSC: 10577-11056 CP: yes SCS: both ST: SS BLAST-Start: [head-to-tail adaptor [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 1.89679E-107 GAP: 67 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.11, -2.3158002311349737, yes F: head-to-tail adaptor SIF-BLAST: ,,[head-to-tail adaptor [Microbacterium phage Rasovi] ],,QJD49989,99.3711,1.89679E-107 SIF-HHPRED: Yqbg; Putative Head-Tail Connector Protein Yqbg from Bacillus subtilis and similar proteins.,,,cd08053,84.2767,99.5 SIF-Syn: Found upstream from head-to-tail adaptor as in Htur

CDS 11056 - 11379
  /gene="13"
  /product="gp13"
  /function="head-to-tail stopper"
  /locus tag="Linayshia_13"
    /note=Original Glimmer call @bp 11056 has strength 8.83; Genemark calls start at 11056
    /note=SSC: 11056-11379 CP: yes SCS: both ST: SS BLAST-Start: [head-to-tail stopper [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 5.708E-72 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.898, -4.825272756372522, no F: head-to-tail stopper SIF-BLAST: ,,[head-to-tail stopper [Microbacterium phage Rasovi] ],,QJD49990,100.0,5.708E-72 SIF-HHPRED: Minor_capsid_1 ; Minor capsid protein,,,PF10665.12,89.7196,99.5 SIF-Syn: Found upstream from head-to-tail stopper as in Rasovi.

CDS 11376 - 11741
  /gene="14"
  /product="gp14"
  /function="head-to-tail stopper"
  /locus tag="Linayshia_14"
    /note=Original Glimmer call @bp 11376 has strength 6.34; Genemark calls start at 11376
    /note=SSC: 11376-11741 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_14 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 3.84029E-82 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.442, -3.8116689268127657, no F: head-to-tail stopper SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_14 [Microbacterium phage Rasovi] ],,QJD49991,99.1736,3.84029E-82 SIF-HHPRED: Minor_capsid_2 ; Minor capsid protein,,,PF11114.11,81.8182,99.3 SIF-Syn: Downstream from head-to-tail stopper as in Htur

CDS 11738 - 12178
  /gene="15"
  /product="gp15"
  /function="tail terminator"
  /locus tag="Linayshia_15"
    /note=Original Glimmer call @bp 11738 has strength 10.8; Genemark calls start at 11738
    /note=SSC: 11738-12178 CP: yes SCS: both ST: SS BLAST-Start: [tail terminator [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 8.57573E-102 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.852, -5.273552388616308, no F: tail terminator SIF-BLAST: ,,[tail terminator [Microbacterium phage Rasovi] ],,QJD49992,99.3151,8.57573E-102 SIF-HHPRED: Minor_capsid_3 ; Bacteriophage minor capsid protein,,,PF12691.10,85.6164,99.3 SIF-Syn: Found Upstream from Tail Terminator as in Htur

CDS 12205 - 12705
  /gene="16"
  /product="gp16"
  /function="major tail protein"
  /locus tag="Linayshia_16"
    /note=Original Glimmer call @bp 12205 has strength 15.9; Genemark calls start at 12205
    /note=SSC: 12205-12705 CP: yes SCS: both ST: SS BLAST-Start: [major tail protein [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 8.29956E-117 GAP: 26 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.11, -2.394485424036831, yes F: major tail protein SIF-BLAST: ,,[major tail protein [Microbacterium phage Rasovi] ],,QJD49993,100.0,8.29956E-117 SIF-HHPRED: Phage major tail protein, TP901-1 family; "neck", "portal", "capsid", "tail tube", VIRUS; 3.58A {Rhodobacter capsulatus},,,6TE9_G,89.1566,99.3 SIF-Syn: major tail protein

CDS 12773 - 13225
  /gene="17"
  /product="gp17"
  /function="tail assembly chaperone"
  /locus tag="Linayshia_17"
    /note=Original Glimmer call @bp 12773 has strength 14.89; Genemark calls start at 12773
    /note=SSC: 12773-13225 CP: yes SCS: both ST: SS BLAST-Start: [tail assembly chaperone [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 4.67232E-106 GAP: 67 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.375, -3.8137921535956054, no F: tail assembly chaperone SIF-BLAST: ,,[tail assembly chaperone [Microbacterium phage Rasovi] ],,QJD49994,100.0,4.67232E-106 SIF-HHPRED:  SIF-Syn: Downstream of major tail protein as in Htur

CDS join(12773..13162,13162..13500)
  /gene="18"
  /product="gp18"
  /function="tail assembly chaperone"
  /locus tag="Linayshia_18"
    /note=
    /note=SSC: 12773-13500 CP: yes SCS: neither ST: NI BLAST-Start: [tail assembly chaperone [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 6.04904E-175 GAP: -453 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.375, -3.8137921535956054, no F: tail assembly chaperone SIF-BLAST: ,,[tail assembly chaperone [Microbacterium phage Htur]],,XEN15918,99.1736,6.04904E-175 SIF-HHPRED:  SIF-Syn: Upstream of tape measure as in Htur

CDS 13506 - 15500
  /gene="19"
  /product="gp19"
  /function="tape measure protein"
  /locus tag="Linayshia_19"
    /note=Original Glimmer call @bp 13506 has strength 12.69; Genemark calls start at 13506
    /note=SSC: 13506-15500 CP: yes SCS: both ST: SS BLAST-Start: [tape measure protein [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 0.0 GAP: 4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.519, -3.649482460397077, no F: tape measure protein SIF-BLAST: ,,[tape measure protein [Microbacterium phage Rasovi] ],,QJD49996,99.5482,0.0 SIF-HHPRED: Tape Measure Protein, gp57; phage tail, tail tip, tape measure protein, VIRAL PROTEIN; 3.7A {Staphylococcus virus 80alpha},,,6V8I_BF,12.5,99.5 SIF-Syn: Found upstream from tape measure protein as in Rasovi.

CDS 15510 - 16403
  /gene="20"
  /product="gp20"
  /function="minor tail protein"
  /locus tag="Linayshia_20"
    /note=Original Glimmer call @bp 15510 has strength 13.65; Genemark calls start at 15510
    /note=SSC: 15510-16403 CP: yes SCS: both ST: SS BLAST-Start: [minor tail protein [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 0.0 GAP: 9 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.263, -2.0111200136961407, yes F: minor tail protein SIF-BLAST: ,,[minor tail protein [Microbacterium phage Rasovi] ],,QJD49997,99.3266,0.0 SIF-HHPRED: HYPOTHETICAL PROTEIN 19.1; VIRAL PROTEIN, DISTAL TAIL PROTEIN; 2.95A {BACILLUS PHAGE SPP1},,,2X8K_C,91.2458,99.8 SIF-Syn: Found upstream from minor tail protein as in Rasovi.

CDS 16403 - 18304
  /gene="21"
  /product="gp21"
  /function="minor tail protein"
  /locus tag="Linayshia_21"
    /note=Original Glimmer call @bp 16403 has strength 13.59; Genemark calls start at 16403
    /note=SSC: 16403-18304 CP: yes SCS: both ST: SS BLAST-Start: [minor tail protein [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 0.0 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.146, -4.440057856863077, no F: minor tail protein SIF-BLAST: ,,[minor tail protein [Microbacterium phage Htur]],,XEN15921,100.0,0.0 SIF-HHPRED: Sipho_Gp37 ; Siphovirus ReqiPepy6 Gp37-like protein,,,PF14594.9,56.5561,99.8 SIF-Syn: Found downstream from minor tail protein as in Rasovi.

CDS 18310 - 18627
  /gene="22"
  /product="gp22"
  /function="hypothetical protein"
  /locus tag="Linayshia_22"
    /note=Original Glimmer call @bp 18310 has strength 5.43; Genemark calls start at 18310
    /note=SSC: 18310-18627 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_22 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 5.91443E-66 GAP: 5 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.76, -3.1379842619144376, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_22 [Microbacterium phage Rasovi] ],,QJD49999,99.0476,5.91443E-66 SIF-HHPRED:  SIF-Syn: NKF

CDS 18629 - 19360
  /gene="23"
  /product="gp23"
  /function="minor tail protein"
  /locus tag="Linayshia_23"
    /note=Original Glimmer call @bp 18629 has strength 12.61; Genemark calls start at 18629
    /note=SSC: 18629-19360 CP: yes SCS: both ST: SS BLAST-Start: [minor tail protein [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 2.36988E-172 GAP: 1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.11, -2.3158002311349737, yes F: minor tail protein SIF-BLAST: ,,[minor tail protein [Microbacterium phage Rasovi] ],,QJD50000,100.0,2.36988E-172 SIF-HHPRED: Receptor Binding Protein; beta sandwich domain, phage receptor binding protein, Lactococcus lactis pellicle cell wall polyphosphosaccharide, VIRAL PROTEIN; 1.75A {Lactococcus phage 1358},,,4L9B_A,60.9053,99.5 SIF-Syn: 

CDS 19375 - 20196
  /gene="24"
  /product="gp24"
  /function="minor tail protein"
  /locus tag="Linayshia_24"
    /note=Original Glimmer call @bp 19375 has strength 6.45; Genemark calls start at 19375
    /note=SSC: 19375-20196 CP: yes SCS: both ST: SS BLAST-Start: [minor tail protein [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 0.0 GAP: 14 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.684, -3.810925907842985, yes F: minor tail protein SIF-BLAST: ,,[minor tail protein [Microbacterium phage Rasovi] ],,QJD50001,100.0,0.0 SIF-HHPRED: DUF859 ; Siphovirus protein of unknown function (DUF859),,,PF05895.15,44.3223,98.9 SIF-Syn: Found upstream from Minor tail protein as in Rasovi

CDS 20189 - 20386
  /gene="25"
  /product="gp25"
  /function="hypothetical protein"
  /locus tag="Linayshia_25"
    /note=Original Glimmer call @bp 20189 has strength 7.87; Genemark calls start at 20189
    /note=SSC: 20189-20386 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_25 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 1.076E-40 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.573, -3.4560725221641597, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_25 [Microbacterium phage Rasovi] ],,QJD50002,100.0,1.076E-40 SIF-HHPRED:  SIF-Syn: NKF

CDS 20383 - 20661
  /gene="26"
  /product="gp26"
  /function="hypothetical protein"
  /locus tag="Linayshia_26"
    /note=Original Glimmer call @bp 20383 has strength 9.44; Genemark calls start at 20383
    /note=SSC: 20383-20661 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_26 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 2.36542E-59 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.76, -3.9043971090268372, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_26 [Microbacterium phage Rasovi] ],,QJD50003,100.0,2.36542E-59 SIF-HHPRED:  SIF-Syn: NKF

CDS 20654 - 21529
  /gene="27"
  /product="gp27"
  /function="endolysin"
  /locus tag="Linayshia_27"
    /note=Original Glimmer call @bp 20654 has strength 15.53; Genemark calls start at 20654
    /note=SSC: 20654-21529 CP: yes SCS: both ST: SS BLAST-Start: [endolysin [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 0.0 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.07, -4.522979412939132, no F: endolysin SIF-BLAST: ,,[endolysin [Microbacterium phage Htur]],,XEN15927,100.0,0.0 SIF-HHPRED: D,D-dipeptidase/D,D-carboxypeptidase; CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID, NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES, NIAID; HET: 2D8, LY0, GOL, PE3; 1.364A {Enterococcus faecalis},,,4MUQ_A,77.6632,99.7 SIF-Syn: Found upstream from endolysin as in Rasovi.

CDS 21605 - 21994
  /gene="28"
  /product="gp28"
  /function="hypothetical protein"
  /locus tag="Linayshia_28"
    /note=Original Glimmer call @bp 21605 has strength 7.3; Genemark calls start at 21620
    /note=SSC: 21605-21994 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_28 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 3.36924E-83 GAP: 75 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.133, -4.466674028236667, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_28 [Microbacterium phage Rasovi] ],,QJD50005,100.0,3.36924E-83 SIF-HHPRED:  SIF-Syn: NKF

CDS 21991 - 22689
  /gene="29"
  /product="gp29"
  /function="minor tail protein"
  /locus tag="Linayshia_29"
    /note=Original Glimmer call @bp 21991 has strength 4.2; Genemark calls start at 21991
    /note=SSC: 21991-22689 CP: yes SCS: both ST: SS BLAST-Start: [minor tail protein [Microbacterium phage Rasovi]],,NCBI, q1:s1 100.0% 4.11467E-156 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.471, -4.915351186182232, no F: minor tail protein SIF-BLAST: ,,[minor tail protein [Microbacterium phage Rasovi]],,QJD50006,95.8506,4.11467E-156 SIF-HHPRED:  SIF-Syn: Found downstream from minor tail protein as in Rasovi.

CDS 22691 - 22969
  /gene="30"
  /product="gp30"
  /function="Holin"
  /locus tag="Linayshia_30"
    /note=Original Glimmer call @bp 22691 has strength 11.16; Genemark calls start at 22691
    /note=SSC: 22691-22969 CP: yes SCS: both ST: SS BLAST-Start: [holin [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 1.13605E-55 GAP: 1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.869, -3.1164791313608173, yes F: Holin SIF-BLAST: ,,[holin [Microbacterium phage Rasovi] ],,QJD50007,100.0,1.13605E-55 SIF-HHPRED: Phage_r1t_holin ; Putative lactococcus lactis phage r1t holin,,,PF16945.8,82.6087,99.6 SIF-Syn: Found upstream from helix-turn-helix DNA binding domain protein as in Rasovi.

CDS 23073 - 23315
  /gene="31"
  /product="gp31"
  /function="helix-turn-helix DNA binding domain"
  /locus tag="Linayshia_31"
    /note=Original Glimmer call @bp 23112 has strength 6.83; Genemark calls start at 23073
    /note=SSC: 23073-23315 CP: yes SCS: both-gm ST: SS BLAST-Start: [helix-turn-helix DNA binding domain protein [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 9.53063E-51 GAP: 103 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.082, -5.342699568601861, no F: helix-turn-helix DNA binding domain SIF-BLAST: ,,[helix-turn-helix DNA binding domain protein [Microbacterium phage Rasovi] ],,QJD50008,100.0,9.53063E-51 SIF-HHPRED: a.35.1.2 (C:) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]} | CLASS: All alpha proteins, FOLD: lambda repressor-like DNA-binding domains, SUPFAM: lambda repressor-like DNA-binding domains, FAM: Phage repressors,,,SCOP_d3jxbc_,65.0,98.5 SIF-Syn: Found upstream from DNA helicase as in Rasovi.

CDS 23308 - 23436
  /gene="32"
  /product="gp32"
  /function="hypothetical protein"
  /locus tag="Linayshia_32"
    /note=Original Glimmer call @bp 23308 has strength 5.74; Genemark calls start at 23308
    /note=SSC: 23308-23436 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_PERMAG_33 [Microbacterium phage PermaG]],,NCBI, q1:s1 100.0% 1.32839E-16 GAP: -8 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.909, -4.880712669744396, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_PERMAG_33 [Microbacterium phage PermaG]],,QWY83821,90.4762,1.32839E-16 SIF-HHPRED:  SIF-Syn: NKF

CDS 23433 - 24860
  /gene="33"
  /product="gp33"
  /function="DNA helicase"
  /locus tag="Linayshia_33"
    /note=Original Glimmer call @bp 23433 has strength 13.1; Genemark calls start at 23433
    /note=SSC: 23433-24860 CP: yes SCS: both ST: SS BLAST-Start: [DNA helicase [Microbacterium phage Rasovi]],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.248, -4.0818432048678375, no F: DNA helicase SIF-BLAST: ,,[DNA helicase [Microbacterium phage Rasovi]],,QJD50010,99.7895,0.0 SIF-HHPRED: Chromatin-remodeling ATPase INO80; Chromatin Remodeler, hexasome, DNA BINDING PROTEIN, DNA BINDING PROTEIN-Hydrolase complex; HET: ADP; 3.41A {Saccharomyces cerevisiae S288C},,,8EUF_Q,98.1053,100.0 SIF-Syn: Found downstream from helix-turn-helix DNA binding domain protein as seen in Rasovi.

CDS 24900 - 25100
  /gene="34"
  /product="gp34"
  /function="hypothetical protein"
  /locus tag="Linayshia_34"
    /note=Original Glimmer call @bp 24900 has strength 17.86; Genemark calls start at 24900
    /note=SSC: 24900-25100 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_HTUR_34 [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 1.76701E-38 GAP: 39 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.122, -5.001512434791962, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_HTUR_34 [Microbacterium phage Htur]],,XEN15934,100.0,1.76701E-38 SIF-HHPRED:  SIF-Syn: NKF

CDS 25115 - 25678
  /gene="35"
  /product="gp35"
  /function="hypothetical protein"
  /locus tag="Linayshia_35"
    /note=Original Glimmer call @bp 25115 has strength 6.99; Genemark calls start at 25115
    /note=SSC: 25115-25678 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_35 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 9.24854E-134 GAP: 14 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.955, -2.723328252647382, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_35 [Microbacterium phage Rasovi] ],,QJD50012,100.0,9.24854E-134 SIF-HHPRED:  SIF-Syn: NKF

CDS 25675 - 25845
  /gene="36"
  /product="gp36"
  /function="hypothetical protein"
  /locus tag="Linayshia_36"
    /note=Original Glimmer call @bp 25675 has strength 2.71
    /note=SSC: 25675-25845 CP: yes SCS: glimmer ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_36 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 6.4147E-33 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.852, -4.9224435286090085, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_36 [Microbacterium phage Rasovi] ],,QJD50013,100.0,6.4147E-33 SIF-HHPRED:  SIF-Syn: NKF

CDS 25848 - 26099
  /gene="37"
  /product="gp37"
  /function="hypothetical protein"
  /locus tag="Linayshia_37"
    /note=Original Glimmer call @bp 25848 has strength 7.78; Genemark calls start at 25833
    /note=SSC: 25848-26099 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_HTUR_37 [Microbacterium phage Htur]],,NCBI, q1:s6 100.0% 1.47664E-54 GAP: 2 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.901, -5.1701681203124, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_HTUR_37 [Microbacterium phage Htur]],,XEN15937,94.3182,1.47664E-54 SIF-HHPRED:  SIF-Syn: NKF

CDS 26089 - 26442
  /gene="38"
  /product="gp38"
  /function="hypothetical protein"
  /locus tag="Linayshia_38"
    /note=Original Glimmer call @bp 26089 has strength 11.9; Genemark calls start at 26089
    /note=SSC: 26089-26442 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_HTUR_38 [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 4.92492E-79 GAP: -11 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.76, -3.0592990690125803, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_HTUR_38 [Microbacterium phage Htur]],,XEN15938,100.0,4.92492E-79 SIF-HHPRED:  SIF-Syn: NKF

CDS 26442 - 26837
  /gene="39"
  /product="gp39"
  /function="hypothetical protein"
  /locus tag="Linayshia_39"
    /note=Original Glimmer call @bp 26457 has strength 7.7; Genemark calls start at 26442
    /note=SSC: 26442-26837 CP: yes SCS: both-gm ST: SS BLAST-Start: [hypothetical protein SEA_HTUR_39 [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 3.36566E-91 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.65, -4.137199935798589, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_HTUR_39 [Microbacterium phage Htur]],,XEN15939,100.0,3.36566E-91 SIF-HHPRED:  SIF-Syn: NKF

CDS 26824 - 27429
  /gene="40"
  /product="gp40"
  /function="ruvc-like resolvase"
  /locus tag="Linayshia_40"
    /note=Original Glimmer call @bp 26824 has strength 11.81; Genemark calls start at 26824
    /note=SSC: 26824-27429 CP: yes SCS: both ST: SS BLAST-Start: [RuvC-like resolvase [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 4.77506E-146 GAP: -14 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.624, -3.284949965096066, no F: ruvc-like resolvase SIF-BLAST: ,,[RuvC-like resolvase [Microbacterium phage Htur]],,XEN15940,100.0,4.77506E-146 SIF-HHPRED: c.55.3.6 (A:) RuvC resolvase {Escherichia coli [TaxId: 562]},,,d1hjra_,74.6269,99.8 SIF-Syn: Downstream from exonuclease as in Htur

CDS 27398 - 27772
  /gene="41"
  /product="gp41"
  /function="hypothetical protein"
  /locus tag="Linayshia_41"
    /note=Original Glimmer call @bp 27398 has strength 10.67; Genemark calls start at 27431
    /note=SSC: 27398-27772 CP: no SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_41 [Microbacterium phage Rasovi] ],,NCBI, q12:s1 91.129% 1.96083E-76 GAP: -32 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.664, -3.340404459692468, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_41 [Microbacterium phage Rasovi] ],,QJD50018,100.0,1.96083E-76 SIF-HHPRED:  SIF-Syn: NKF

CDS 27772 - 27948
  /gene="42"
  /product="gp42"
  /function="hypothetical protein"
  /locus tag="Linayshia_42"
    /note=Original Glimmer call @bp 27772 has strength 6.54; Genemark calls start at 27772
    /note=SSC: 27772-27948 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_HTUR_42 [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 4.84986E-35 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.228, -4.125189544139167, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_HTUR_42 [Microbacterium phage Htur]],,XEN15942,100.0,4.84986E-35 SIF-HHPRED:  SIF-Syn: NKF

CDS 27941 - 28954
  /gene="43"
  /product="gp43"
  /function="exonuclease"
  /locus tag="Linayshia_43"
    /note=Original Glimmer call @bp 27941 has strength 17.13; Genemark calls start at 27941
    /note=SSC: 27941-28954 CP: yes SCS: both ST: SS BLAST-Start: [exonuclease [Microbacterium phage Rasovi]],,NCBI, q1:s1 100.0% 0.0 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.021, -2.5052746077145835, yes F: exonuclease SIF-BLAST: ,,[exonuclease [Microbacterium phage Rasovi]],,QJD50020,100.0,0.0 SIF-HHPRED: ATP-dependent DNA helicase (UvrD/REP); DNA, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex; 3.5A {Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)},,,6PPU_A,86.9436,99.7 SIF-Syn: Upstream from RuvC-like resolvase as in Htur and downstream from  RecA-like DNA Recombinase found in Htur

CDS 28957 - 29514
  /gene="44"
  /product="gp44"
  /function="hypothetical protein"
  /locus tag="Linayshia_44"
    /note=Original Glimmer call @bp 28957 has strength 14.92; Genemark calls start at 28957
    /note=SSC: 28957-29514 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_44 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 4.04269E-131 GAP: 2 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.005, -4.597144958218091, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_44 [Microbacterium phage Rasovi] ],,QJD50021,99.4595,4.04269E-131 SIF-HHPRED:  SIF-Syn: NKF

CDS 29514 - 29804
  /gene="45"
  /product="gp45"
  /function="hypothetical protein"
  /locus tag="Linayshia_45"
    /note=Original Glimmer call @bp 29514 has strength 8.99; Genemark calls start at 29514
    /note=SSC: 29514-29804 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_HTUR_45 [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 8.93155E-64 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.318, -4.586591534678451, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_HTUR_45 [Microbacterium phage Htur]],,XEN15945,100.0,8.93155E-64 SIF-HHPRED:  SIF-Syn: NKF

CDS 29795 - 30001
  /gene="46"
  /product="gp46"
  /function="hypothetical protein"
  /locus tag="Linayshia_46"
    /note=Original Glimmer call @bp 29795 has strength 5.13; Genemark calls start at 29795
    /note=SSC: 29795-30001 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_HTUR_46 [Microbacterium phage Htur]],,NCBI, q3:s1 97.0588% 4.17735E-39 GAP: -10 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.396, -4.817920049730383, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_HTUR_46 [Microbacterium phage Htur]],,XEN15946,100.0,4.17735E-39 SIF-HHPRED: Cell wall surface anchor protein; Adhesins, cell adhesion; 1.89A {Streptococcus agalactiae},,,4Z1P_A,77.9412,92.8 SIF-Syn: NKF

CDS 29998 - 30459
  /gene="47"
  /product="gp47"
  /function="hypothetical protein"
  /locus tag="Linayshia_47"
    /note=
    /note=SSC: 29998-30459 CP: yes SCS: neither ST: NA BLAST-Start: [hypothetical protein SEA_HTUR_47 [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 7.67056E-108 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.403, -5.874376955301545, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_HTUR_47 [Microbacterium phage Htur]],,XEN15947,100.0,7.67056E-108 SIF-HHPRED:  SIF-Syn: NKF

CDS 30347 - 31414
  /gene="48"
  /product="gp48"
  /function="RecA-like DNA recombinase"
  /locus tag="Linayshia_48"
    /note=Original Glimmer call @bp 30347 has strength 16.76; Genemark calls start at 30341
    /note=SSC: 30347-31414 CP: yes SCS: both-gl ST: SS BLAST-Start: [RecA-like DNA recombinase [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 0.0 GAP: -113 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.123, -4.34663776219455, no F: RecA-like DNA recombinase SIF-BLAST: ,,[RecA-like DNA recombinase [Microbacterium phage Htur]],,XEN15948,100.0,0.0 SIF-HHPRED: c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]},,,d1u94a1,61.1268,99.6 SIF-Syn: Downstream from exonuclease as in Htur

tRNA 31436 - 31498
  /gene="49"
  /product="tRNA-Pro(tgg)"
  /locus tag="LINAYSHIA_49"
    /note=tRNA-Pro(tgg)

CDS 31525 - 31776
  /gene="50"
  /product="gp50"
  /function="hypothetical protein"
  /locus tag="Linayshia_50"
    /note=
    /note=SSC: 31525-31776 CP: yes SCS: neither ST: NA BLAST-Start: [hypothetical protein SEA_RASOVI_50 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 5.87769E-52 GAP: 110 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.546, -5.632912100754952, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_50 [Microbacterium phage Rasovi] ],,QJD50040,100.0,5.87769E-52 SIF-HHPRED:  SIF-Syn: NKF

CDS 32063 - 32608
  /gene="51"
  /product="gp51"
  /function="hypothetical protein"
  /locus tag="Linayshia_51"
    /note=Original Glimmer call @bp 32063 has strength 14.36; Genemark calls start at 32063
    /note=SSC: 32063-32608 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_HTUR_51 [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 8.0098E-130 GAP: 286 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.123, -4.426679849915311, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_HTUR_51 [Microbacterium phage Htur]],,XEN15950,100.0,8.0098E-130 SIF-HHPRED: DUF669 ; Protein of unknown function (DUF669),,,PF05037.16,76.2431,99.2 SIF-Syn: NKF

CDS 32694 - 35399
  /gene="52"
  /product="gp52"
  /function="DNA primase/polymerase/helicase"
  /locus tag="Linayshia_52"
    /note=Original Glimmer call @bp 32694 has strength 9.79; Genemark calls start at 32763
    /note=SSC: 32694-35399 CP: yes SCS: both-gl ST: SS BLAST-Start: [DNA primase/polymerase/helicase [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 0.0 GAP: 85 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.546, -4.279791573443133, no F: DNA primase/polymerase/helicase SIF-BLAST: ,,[DNA primase/polymerase/helicase [Microbacterium phage Htur]],,XEN15951,99.889,0.0 SIF-HHPRED: DNA primase; Helicase, DNA binding, AMPPNP, REPLICATION; HET: ANP; 3.1A {Staphylococcus aureus},,,7OM0_C,37.4029,99.8 SIF-Syn: Upstream of DNA polymerase I as in Htur

CDS complement (35524 - 35829)
  /gene="53"
  /product="gp53"
  /function="hypothetical protein"
  /locus tag="Linayshia_53"
    /note=Original Glimmer call @bp 35787 has strength 14.44; Genemark calls start at 35829
    /note=SSC: 35829-35524 CP: yes SCS: both-gm ST: SS BLAST-Start: [hypothetical protein SEA_HTUR_53 [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 1.34005E-61 GAP: 414 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.881, -5.513395795770837, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_HTUR_53 [Microbacterium phage Htur]],,XEN15952,96.0396,1.34005E-61 SIF-HHPRED:  SIF-Syn: NKF

CDS 36244 - 38538
  /gene="54"
  /product="gp54"
  /function="DNA polymerase I"
  /locus tag="Linayshia_54"
    /note=Original Glimmer call @bp 36244 has strength 13.9; Genemark calls start at 36259
    /note=SSC: 36244-38538 CP: yes SCS: both-gl ST: NI BLAST-Start: [DNA polymerase I [Microbacterium phage Rasovi]],,NCBI, q1:s1 100.0% 0.0 GAP: 414 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.1, -2.356391881054909, yes F: DNA polymerase I SIF-BLAST: ,,[DNA polymerase I [Microbacterium phage Rasovi]],,QJD50028,99.8691,0.0 SIF-HHPRED: e.8.1.1 (A:519-928) DNA polymerase I (Klenow fragment) {Escherichia coli [TaxId: 562]},,,d1kfsa2,58.6387,100.0 SIF-Syn: Found downstream from DNA primase as in Rasovi.

CDS 38531 - 38827
  /gene="55"
  /product="gp55"
  /function="hypothetical protein"
  /locus tag="Linayshia_55"
    /note=Original Glimmer call @bp 38531 has strength 0.23; Genemark calls start at 38531
    /note=SSC: 38531-38827 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HOU56_gp53 [Microbacterium phage Goodman] ],,NCBI, q1:s1 100.0% 2.01325E-64 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.647, -5.437750947756905, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein HOU56_gp53 [Microbacterium phage Goodman] ],,YP_009815957,100.0,2.01325E-64 SIF-HHPRED:  SIF-Syn: NKF

CDS 38952 - 40172
  /gene="56"
  /product="gp56"
  /function="adenylosuccinate synthetase PurA-like"
  /locus tag="Linayshia_56"
    /note=Original Glimmer call @bp 38952 has strength 17.43; Genemark calls start at 38952
    /note=SSC: 38952-40172 CP: yes SCS: both ST: SS BLAST-Start: [PurA-like adenylosuccinate synthetase [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 0.0 GAP: 124 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.1, -2.338663114094478, yes F: adenylosuccinate synthetase PurA-like SIF-BLAST: ,,[PurA-like adenylosuccinate synthetase [Microbacterium phage Rasovi] ],,QJD50030,100.0,0.0 SIF-HHPRED: c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Escherichia coli [TaxId: 562]},,,d1qf5a_,92.1182,100.0 SIF-Syn: found downstream DNA polymerase l as in Rasovi

CDS 40174 - 40710
  /gene="57"
  /product="gp57"
  /function="hypothetical protein"
  /locus tag="Linayshia_57"
    /note=Original Glimmer call @bp 40174 has strength 12.15; Genemark calls start at 40174
    /note=SSC: 40174-40710 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_57 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 7.39075E-127 GAP: 1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.442, -4.021779273157878, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_57 [Microbacterium phage Rasovi] ],,QJD50031,100.0,7.39075E-127 SIF-HHPRED:  SIF-Syn: NKF

CDS 40707 - 40844
  /gene="58"
  /product="gp58"
  /function="hypothetical protein"
  /locus tag="Linayshia_58"
    /note=Original Glimmer call @bp 40707 has strength 4.32; Genemark calls start at 40707
    /note=SSC: 40707-40844 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_58 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 3.42571E-23 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.772, -5.443606692405957, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_58 [Microbacterium phage Rasovi] ],,QJD50032,100.0,3.42571E-23 SIF-HHPRED:  SIF-Syn: NKF

CDS 40841 - 41083
  /gene="59"
  /product="gp59"
  /function="hypothetical protein"
  /locus tag="Linayshia_59"
    /note=Original Glimmer call @bp 40841 has strength 14.97; Genemark calls start at 40841
    /note=SSC: 40841-41083 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_59 [Microbacterium phage Rasovi]],,NCBI, q1:s1 100.0% 3.59607E-47 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.177, -2.17469248771465, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_59 [Microbacterium phage Rasovi]],,QJD50033,98.75,3.59607E-47 SIF-HHPRED: DUF6354 ; Family of unknown function (DUF6354),,,PF19881.2,95.0,95.8 SIF-Syn: NKF

CDS 41083 - 41250
  /gene="60"
  /product="gp60"
  /function="hypothetical protein"
  /locus tag="Linayshia_60"
    /note=Original Glimmer call @bp 41083 has strength 10.21; Genemark calls start at 41083
    /note=SSC: 41083-41250 CP: yes SCS: both ST: SS BLAST-Start:  GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.102, -4.4713484557894425, yes F: hypothetical protein SIF-BLAST:  SIF-HHPRED:  SIF-Syn: NKF

CDS 41250 - 41708
  /gene="61"
  /product="gp61"
  /function="deoxyuridine triphosphatase"
  /locus tag="Linayshia_61"
    /note=Original Glimmer call @bp 41250 has strength 8.93; Genemark calls start at 41250
    /note=SSC: 41250-41708 CP: yes SCS: both ST: SS BLAST-Start: [dUTPase [Microbacterium phage Htur]],,NCBI, q1:s1 100.0% 5.1575E-105 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.975, -4.741344217713455, no F: deoxyuridine triphosphatase SIF-BLAST: ,,[dUTPase [Microbacterium phage Htur]],,XEN15960,100.0,5.1575E-105 SIF-HHPRED: b.85.4.1 (A:24-159) Deoxyuridine 5`-triphosphate nucleotidohydrolase (dUTPase) {Human (Homo sapiens) [TaxId: 9606]},,,d3ehwa1,93.4211,99.9 SIF-Syn: found downstream from PurA-like adenylosuccinate as in Rasovi

CDS 41683 - 41934
  /gene="62"
  /product="gp62"
  /function="hypothetical protein"
  /locus tag="Linayshia_62"
    /note=
    /note=SSC: 41683-41934 CP: no SCS: neither ST: NI BLAST-Start: [hypothetical protein SEA_RASOVI_62 [Microbacterium phage Rasovi] ],,NCBI, q1:s1 100.0% 8.0354E-44 GAP: -26 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.614, -3.3861058366776207, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_62 [Microbacterium phage Rasovi] ],,QJD50036,91.5663,8.0354E-44 SIF-HHPRED:  SIF-Syn: NKF

CDS 41931 - 42137
  /gene="63"
  /product="gp63"
  /function="hypothetical protein"
  /locus tag="Linayshia_63"
    /note=Original Glimmer call @bp 41949 has strength 8.9; Genemark calls start at 41931
    /note=SSC: 41931-42137 CP: yes SCS: both-gm ST: SS BLAST-Start: [hypothetical protein SEA_TYPHER_59 [Microbacterium phage Typher]],,NCBI, q1:s4 98.5294% 4.43765E-7 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.621, -6.23969412135534, no F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_TYPHER_59 [Microbacterium phage Typher]],,URM86967,53.2468,4.43765E-7 SIF-HHPRED:  SIF-Syn: NKF

CDS complement (42194 - 42664)
  /gene="64"
  /product="gp64"
  /function="hypothetical protein"
  /locus tag="Linayshia_64"
    /note=Original Glimmer call @bp 42664 has strength 14.14; Genemark calls start at 42664
    /note=SSC: 42664-42194 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_RASOVI_64 [Microbacterium phage Rasovi]],,NCBI, q1:s1 100.0% 4.70121E-110 GAP: 0 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.881, -2.8030814177649614, yes F: hypothetical protein SIF-BLAST: ,,[hypothetical protein SEA_RASOVI_64 [Microbacterium phage Rasovi]],,QJD50038,98.7179,4.70121E-110 SIF-HHPRED:  SIF-Syn: NKF