CDS complement (join(1. .372;70003. .70074)) /note=Phagesdb Function: hits with cluster A1, 4 counts, 40% frequency /note=Phagesdb BLAST: tops hit with RazzB and Forrestel, e-val significant, function unknown /note=HHPRED: ISOMERASE-VIRAL PROTEIN, e-value not sig /note=NCBI BLAST: tops hit with MellowYellow and Pointis with sig e-val, hypothetical protein /note= /note=Left gene candidates the same; 1 to 1 ratio with MellowYellow CDS 391 - 660 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Zooman, e-value sig of 28th, function unknown /note=HHPRED: Probable inorganic polyphosphate/ATP-NAD kinase; e-val not sig /note=NCBI BLAST: N/A /note=Pham Maps: MellowYellow: 12 (O), 13 (MY) Par-B like nuclease domain protein /note= /note=Gene Candidate: E-value was not sig, so it was left alone CDS 1035 - 1322 /note=Phagesdb Function: hits with minor tail protein, subcluster BI1, 75% frequency /note=Phagesdb BLAST: hits with Ranunculus, e-value not sig /note=HHPRED: Family of unknown function, e-value sig /note=NCBI BLAST: hits with Ranunculus, e-value sig, hypothetical protein /note= /note=A lot of 1:1 ratio, so gene candidates was left alone CDS 1322 - 1696 /note=Phagesdb Function: hits with subcluster T, tape measure protein, 50% frequency /note=Phagesdb BLAST: hits with Nergal, e-value sig, cluster AG /note=HHPRED: hits with LapA_dom ; Lipopolysaccharide assembly protein A domain; e-value not sig /note=NCBI BLAST: N/A /note= /note=Gene Candidates stayed the same, Orphan Gene CDS 1696 - 1953 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Honk, cluster EH, e-value not sig, function unknown /note=HHPRED: hits with Prenyltransf ; Putative undecaprenyl diphosphate synthase, e-value not sig /note=NCBI BLAST: N/A /note=Start Codon: Kept the same CDS 1950 - 2573 /note=Phagesdb Function: hits with dna polymerase iii alpha subunit, subcluster EN, 50% frequency /note=Phagesdb BLAST: hits with Pointis, e-value sig, function unknown, subcluster AP2 /note=HHPRED: hits with Family of unknown function, e-value not sig /note=NCBI BLAST: hits with membrane protein, lean towards hypothetical /note=Starting Codon: Kept the same /note= /note=2 membrane hits on DeepTMHMM CDS 2575 - 3141 /note=Phagesdb Function: hits with minor tail protein, subcluster AS2, 82% frequency /note=Phagesdb BLAST: hits with Odyssey395, e-val sig, function unknown /note=HHPRED: hits with AAA_16 ; AAA ATPase domain, e-value not sig /note=NCBI BLAST: hits with Pointis, e-value not sig /note=Start Codon: change to start 2575; BLAST 1:1 CDS 3116 - 3523 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Beagle, subcluster AP2, e-value sig /note=HHPRED: hits with PGDYG ; PGDYG protein, e-value sig /note=NCBI BLAST: hits with MellowYellow, e-value sig /note=Start Codon: Kept the same, 1:1 hit with PureGlobe5 CDS 3780 - 3935 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Beagle, e-value sig /note=HHPRED: hits with MobC_2 ; MobC-like protein, e-value not sig /note=NCBI BLAST: hits with MellowYellow, e-value sig /note=Start Codon: Kept the same; 1:1 hit with PureGlobe and Pointis CDS 3932 - 4171 /note=Phagesdb Function: hits with peptidase, subcluster BS, 100% frequency /note=Phagesdb BLAST: hits with Odyssey395, e-value sig, function unknown /note=HHPRED: hits with Domain of unknown function, e-value not sig /note=NCBI BLAST: hits with Pureglobe5, e-value sig, hypothetical protein /note=Start Codon: Kept the same, 1:1 hit with PureGlobe and Odyssey CDS 4172 - 4435 /note=Phagesdb Function: hits with mazg-like nucleotide pyrophosphohydrolase, subcluster EA3, 50% frequency /note=Phagesdb BLAST: hits with Bakery, function unknown, e-value sig /note=HHPRED: hits with PGDYG ; PGDYG protein, e-value sig /note=NCBI BLAST: hits with Rhodococcus, hypothetical protein, e-val sig /note=Start Codon: CDS 4432 - 4605 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with DanielleIgnace; Cluster AT /note=HHPRED: hits with Deinococcus radiophilus; e-value not sig, /note=NCBI BLAST: hits with Arthrobacter phage DanielleIgnace, hypothetical protein, e-value not sig /note=Start Codon: Kept the same, only one gene candidate CDS 4602 - 5183 /note=Phagesdb Function: hits with parb-like nuclease domain protein; subcluster AP2, 7% frequency /note=Phagesdb BLAST: hits with Beagle, ParB-like nuclease domain protein, e-value sig, cluster AP 2 /note=HHPRED: hits with ParB family protein; e-value sig /note=NCBI BLAST: hits with Arthrobacter phage Odyssey395, ParB-like nuclease domain protein, e-value sig /note=Start Codon: Hits 1:1 with other genes, kept the same CDS 5180 - 5404 /note=Phagesdb Function: hits with minor tail protein, subcluster AS2, 22% frequency /note=Phagesdb BLAST: hits with Beagle, function unknown, e-value sig /note=HHPRED: hits with KIF2A-like_1st ; Kinesin-like protein KIF2A-like, N-terminal; e-value not sig /note=NCBI BLAST: hits with Arthrobacter phage Beagle; hypothetical protein, e-value sig /note=Start codon: Changed start to 5180 CDS 5474 - 5974 /note=Phagesdb Function: hits with helix-turn-helix dna binding domain, subcluster AP2, 4% frequency /note=Phagesdb BLAST: hits with Beagle, DNA binding protein, e-value sig, cluster AP2 /note=HHPRED: hits with Protein of unknown function, e-value not sig /note=NCBI BLAST: hits with Pointis, helix-turn-helix DNA binding domain protein, e-value sig /note=Start Codon: Kept the same closer query to subject with other phages CDS 5974 - 6393 /note=Phagesdb Function: hits with ribbon-helix-helix dna binding domain protein, subcluster AP2, 7% frequency /note=Phagesdb BLAST: hits with RazzB, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with Putative; Helicobacter pylori, repressor, transcriptional regulator, e-value sig /note=NCBI BLAST: hits with hypothetical protein Beagle, e-value sig /note=Start Codon: Kept the same, NCBI ratio 1:1 CDS 6406 - 8055 /note=Phagesdb Function: hits with terminase, subcluster AP2, 5% frequency /note=Phagesdb BLAST: hits with MellowYellow, /note=HHPRED: hits with MellowYellow, terminase large subunit, cluster AP2, e-value sig /note=NCBI BLAST: hits with terminase large subunit, e-value not sig /note=Start Codon: Kept the same, NCBI ratio 1:1 CDS 8113 - 8424 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with MellowYellow, function unknown, subcluster AP2 /note=HHPRED: hits with Protein of unknown function, e-value sig /note=NCBI BLAST: hits with arthrobacter phage Odyssey395, membrane protein, e-value sig /note=Start Codon: Kept the same, NCBI ratio 1:1 /note= /note=3 membrane hits with DeepTMHMM CDS 8427 - 10322 /note=Phagesdb Function: hits with portal protein, subcluster AP2, 7% frequency /note=Phagesdb BLAST: hits with MellowYellow, portal protein, cluster AP2 /note=HHPRED: hits with portal protein, Escherichia phage HK97, e-value sig /note=NCBI BLAST: hits with portal protein Arthrobacter phage Odyssey395, e-value not sig /note=Start Codon: Kept the same, NCBI ratio 1:1 CDS 10319 - 10465 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with MellowYellow, cluster AP2, function unknown, e-value sig /note=HHPRED: hits with DUF1660 ; Prophage protein, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, phage MellowYellow, e-value sig /note=Start codon: kept the same at forward 10319; other options have huge gaps and would not line up correctly CDS 10462 - 13146 /note=Phagesdb Function: hits with capsid maturation protease, cluster AP2, 9% frequncy /note=Phagesdb BLAST: hits with MellowYellow, cluster AP2, capsid maturation protease /note=HHPRED: hits with Portal protein, e-value sig /note=NCBI BLAST: hits with capsid maturation protease, MellowYellow, e-value not sig /note=Start Codon: Kept the same, 1:1 ratio with NCBI CDS 13149 - 13292 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Beagel, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with Family of unknown function, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, phage MellowYellow, e-value sig /note=Start Codon: Kept the same, only gene candidate CDS 13443 - 15170 /note=Phagesdb Function: hits with major capsid hexamer protein, cluster AP2, 5% frequency /note=Phagesdb BLAST: hits with Beagle, major capsid hexamer protein, cluster AP2 /note=HHPRED: hits with Protein SRN2, e-value not sig /note=NCBI BLAST: hits with major capsid hexamer, Arthrobacter phage Pureglobe5, e-value not sig /note=Start Codon: Kept the Same, NCBI ratio 1:1 CDS 15239 - 15997 /note=Phagesdb Function: hits with major capsid pentamer protein, cluster DC1, 80% frequency /note=Phagesdb BLAST: hits with Odyssey395, function unknown, e-value sig /note=HHPRED: hits with Transcriptional regulator EF1965, e-value not sig /note=NCBI BLAST: hits with Arthrobacter phage Pointis, fucntion unknown, e-value sig /note=Start Codon: Kept the same, NCBI ratio 1:1, high z-score CDS 16009 - 16518 /note=Phagesdb Function: hits with rect-like ssdna binding protein, cluster Q, 64% fequency /note=Phagesdb BLAST: hits with Beagle, fucntion unknown, e-value sig, cluster AP2 /note=HHPRED: hits with Hypothetical protein, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, Arthrobacter phage Odyssey395, e-value sig /note=Start Codon: Kept the same 1:1 NCBI and BLAST CDS 16525 - 17445 /note=Phagesdb Function: hits with major tail protein, subcluster AP2, 7% frequency /note=Phagesdb BLAST: hits with Ranunculus, major tail protein, cluster AP, E-value sig /note=HHPRED: hits with Tail Tube; Flagellotropic, e-value not sig /note=NCBI BLAST: major tail protein [Arthrobacter phage Pureglobe5, e-value sig /note=Start Codon: Kept the same, hits with major tail protein on BLAST CDS 17518 - 18294 /note=Phagesdb Function: hits with endolysin, cluster AP2, 3% frequency /note=Phagesdb BLAST: hits with Odyssey395, cluster AP2, e-value sig /note=HHPRED: hits with putative dipeptidyl-peptidase VI; e-value not sig /note=NCBI BLAST: hits with endolysin Arthrobacter phage Odyssey395, e-value sig /note=Start Codon: Kept the same, NCBI ratio 1:1 CDS 18297 - 18917 /note=Phagesdb Function: hits with head-to-tail adaptor, cluster AP2, 7% frequency /note=Phagesdb BLAST: hits with Beagle, head-to-tail adaptor, cluster AP2, e-value sig /note=HHPRED: hits with Head completion protein, Escherichia phage DT57C, e-value sig /note=NCBI BLAST: hits with head-to-tail adaptor [Arthrobacter phage Beagle], e-value sig /note=Start Codon: Kept the same, ratio 1:1 on BLAST and NCBI CDS 18914 - 19444 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Beagle, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with RsmE-like, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, Arthrobacter phage Pureglobe5, e-value sig /note=Start Codon: change to forward 18914: 1:1 on BLAST with AP2 phages CDS 19444 - 19956 /note=Phagesdb Function: hits with minor tail protein, subcluster AP2, 7% frequency /note=Phagesdb BLAST: hits with Beagle, function unknown cluster AP2, e-value sig /note=HHPRED: hits with Minor_capsid_2 ; Minor capsid protein, e-value sig /note=NCBI BLAST: hits with hypothetical protein, Pureglobe5, e-value sig /note=Start Codon: Kept the same, only option that works well with BLAST CDS 20020 - 20454 /note=Phagesdb Function: hits with tail assembly chaperone, cluster AP2, 18% frequency /note=Phagesdb BLAST: hits with MellowYellow, tail assembly chaperone, cluster AP2, e-value sig /note=HHPRED: hits with Phage_TAC_10 ; Phage tail assembly chaperone, e-value not sig /note=NCBI BLAST: hits with tail assembly chaperone Arthrobacter phage MellowYellow, e-value /note=Start Codon: kept the same, NCBI 1:1 ratio CDS 20472 - 20600 /note=Phagesdb Function: hits with tail assembly chaperone, subcluster AP2, 60% frequency /note=Phagesdb BLAST: hits with Beagle, function unknown, AP2 cluster, e-value sig /note=HHPRED: hits with ImpA-related domain protein, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, Arthrobacter phage Odyssey395, e-value sig /note=Start Codon: Kept the same, other option present big gaps /note= /note=slippery sequence: GGGAAAA CDS 20617 - 25488 /note=Phagesdb Function: hits with tape measure protein, AP2 cluster, 6% frequency /note=Phagesdb BLAST: hits with Ranunculus, cluster AP2, tape measure protein, e-value not sig /note=HHPRED: hits with Tape Measure Protein, e-value sig /note=NCBI BLAST: hits with tape measure protein [Arthrobacter phage Ranunculus], e-value not sig /note=Start Codon: Kept the same, NCBI ratio 1:1, Protein Sequence 1:1 with AP2 phages CDS 25507 - 26721 /note=Phagesdb Function: hits with minor tail protein, subcluster AP2, 7% frequency /note=Phagesdb BLAST: hits with Odyssey395, minor tail protein, cluster AP2, e-value not sig /note=HHPRED: hits with ORF46; Distal tail protein, Receptor-binding protein, e-value not sig /note=NCBI BLAST: hits with minor tail protein [Arthrobacter phage Odyssey395], e-value not sig /note=Start Codon: Kept the same, NCBI 1:1 ratio CDS 26725 - 27858 /note=Phagesdb Function: hits with minor tail protein, subcluster AP2, 7% frequency /note=Phagesdb BLAST: hits with Beagle, minor tail protein, cluster AP2, e-value not sig /note=HHPRED: hits with Sipho_Gp37 ; Siphovirus ReqiPepy6 Gp37-like protein, e-value sig /note=NCBI BLAST: hits with minor tail protein [Arthrobacter phage Beagle], e-value not sig /note=Start Codon: Kept the same, 1:1 NCBI ratio and 1:1 protein BLAST CDS 27851 - 28060 /note=Phagesdb Function: hits with tape measure protein, cluster DC1, 67% frequency /note=Phagesdb BLAST: hits with Beagle, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with f.4.3.0 (A:) automated matches Acinetobacter baumannii, e-value not sig /note=NCBI BLAST: hits with hypothetical protein Arthrobacter phage Odyssey395, e-value sig /note=Start Codon: Kept the same, NCBI 1:1 ratio for AP2 phages CDS 28092 - 29162 /note=Phagesdb Function: hits with minor tail protein, cluster AP2, 6% frequency /note=Phagesdb BLAST: hits with MellowYellow, minor tail protein, cluster AP2, e-value sig /note=HHPRED: hits with Mtd_N ; Major tropism determinant N-terminal domain, e-value sig /note=NCBI BLAST: hits with minor tail protein Arthrobacter phage Ranunculus, e-value not sig /note=Start Codon: Kept the same, NCBI 1:1 ratio CDS 29163 - 32330 /note=Phagesdb Function: hits with minor tail protein, cluster AP2, 9% frequency /note=Phagesdb BLAST: hits with Ranunculus, minor tail protein, cluster AP, e-value sig /note=HHPRED: hits with SGNH hydrolase-type esterase domain-containing protein, e-value sig /note=NCBI BLAST: hits with minor tail protein Arthrobacter phage Ranunculus, e-value sig /note= /note=double check CDS 32365 - 34338 /note=Phagesdb Function: hits with minor tail protein, subcluster AP2, 9% frequency /note=Phagesdb BLAST: hits with Ranunculus, minor tail protein, cluster AP, e-value not sig /note=HHPRED: hits with Receptor-type tyrosine-protein phosphatase S, e-value not sig /note=NCBI BLAST: hits with minor tail protein Arthrobacter phage Ranunculus, e-value not sig /note=Start Codon: NCBI ratio 1:1 with AP2 phages CDS 34338 - 34685 /note=Phagesdb Function: hits with tape measure protein, subcluster H1, 39% frequency /note=Phagesdb BLAST: hits with Beagle, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with Family of unknown function, e-value not sig /note=NCBI BLAST: hits with hypothetical protein PBI_BEAGLE_44 [Arthrobacter phage Beagle], e-value sig /note=Start Codon: Kept the same, NCBI 1:1 ratio CDS 34672 - 34851 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Ranunculus, function unknown, cluster AP, e-value sig /note=HHPRED: hits with Domain of unknown function, e-value not sig /note=NCBI BLAST: hits with hypothetical protein with Ranunculus, e-value sig /note=Start Codon: Kept the same, only option CDS 34857 - 35201 /note=Phagesdb Function: hits with holin, subcluster M1, 75% frequency /note=Phagesdb BLAST: hits with Odyssey395, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with Protein of unknown function, e-value not sig /note=NCBI BLAST: hits with hypothetical protein [Arthrobacter sp. NicSoilC5], e-value sig /note=Start Codon: kept the same, 1:1 ratio with AP2 phages on NCBI /note= /note=1 clear membrane domain agreed by DeepTMHMM and Sosui CDS 35198 - 35413 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with tank, cluster AP1, function unknown, e-value sig /note=HHPRED: hits with YMF19 ; Plant ATP synthase F0, e-value not sig /note=NCBI BLAST: hits with hypothetical protein [Pseudarthrobacter sp. LT1], e-value sig /note=Start Codon: Kept the same, 1:1 hits with BLAST CDS 35410 - 35793 /note=Phagesdb Function: hits with holin, subcluster AO2, 80% frequency /note=Phagesdb BLAST: hits with Beagle, function unknown, AP2 cluster, e-value sig /note=HHPRED: hits with family of unknown function, e-value not sig /note=NCBI BLAST: hits with membrane protein [Arthrobacter phage Beagle], e-value sig /note=Start Codon: Kept the same. 1:1 ratio with NCBI and BLAST /note= /note=3 membrane hits with DeepTMHMM CDS 35786 - 36139 /note=Phagesdb Function: hits with holin, subcluster EB, 50% frequency /note=Phagesdb BLAST: hits with Kumotta, function unknown, cluster FB, e-value sig /note=HHPRED: hits with Phage_r1t_holin, e-value not sig /note=NCBI BLAST: hits with hypothetical protein [Arthrobacter sp. SIMBA_036], e-value sig /note=Start Codon: CDS 36149 - 37501 /note=Phagesdb Function: hits with minor tail protein, cluster AP2, 16% frequency /note=Phagesdb BLAST: hits with Ranunculus, function unknown, e-value not sig, cluster AP /note=HHPRED: hits with H_lectin ; H-type lectin domain, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, Arthrobacter phage Ranunculus, e-value not sig /note=Start Codon: kept the same, 1:1 ratio NCBI with AP2 phages CDS complement (37591 - 38043) /note=Phagesdb Function: hits with rusa-like resolvase, AP2, 7% frequency /note=Phagesdb BLAST: hits with MellowYellow, RusA-like resolvase, cluster AP2, e-value sig /note=HHPRED: hits with d.79.6.1 (A:) automated matches Escherichia coli, e-value sig /note=NCBI BLAST: hits with RusA-like resolvase [Arthrobacter phage Odyssey395], e-value sig /note=Start Codon: Kept the same, 1:1 ratio NCBI with AP2 phages CDS complement (38033 - 38278) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Ranunculus, function unknown, AP cluster, e-value sig /note=HHPRED: hits with SfsA-like_archaeal, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, Ranunculus, e-value sig /note=Start Codon: Kept the same, 1:1 NCBI with AP2 phages CDS complement (38275 - 39249) /note=Phagesdb Function: hits with ribonucleotide reductase, subcluster M1, 22% frequency /note=Phagesdb BLAST: hits with Ranunculus, ribonucleotide reductase, cluster AP, e-value sig /note=HHPRED: hits with Ribonucleoside-diphosphate reductase subunit beta, e-value not sig /note=NCBI BLAST: hits with ribonucleotide reductase [Arthrobacter phage Ranunculus], e-value not sig /note=Start Codon: Kept the same, 1:1 with Ranunculus and Kovu on BLAST CDS complement (39246 - 39455) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with Putative phosphoglycolate phosphatase, e-value not sig /note=NCBI BLAST: hits with hypothetical protein [Arthrobacter phage Beagle], e-value sig /note=Start Codon: Kept the same, 1:1 majority of AP2 phages NCBI CDS complement (39448 - 39822) /note=Phagesdb Function: hits with helix-turn-helix dna binding domain, subcluster AP2, 8% frequency /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with a.4.1.14 (A:) Middle operon regulator, Mor Bacteriophage Mu, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig /note=Start Codon: Kept the same, more1:1 ratios on NCBI and BLAST CDS complement (39819 - 40130) /note=Phagesdb Function: hits with tape measure protein, subcluster A9, 90% frequency /note=Phagesdb BLAST: hits with AbbyDaisy, function unknown, cluster AY, e-value sig /note=HHPRED: hits with Protein of unknown function, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, AbbyDaisy, e-value sig /note=Start Codon: Kept the same, 1:1 ratio with NCBI CDS complement (40127 - 40351) /note=Phagesdb Function: hits with hnh endonuclease, subcluster EG, 39% frequency /note=Phagesdb BLAST: hits with Ranunculus, HNH endonuclease, cluster AP, e-value sig /note=HHPRED: hits with zf-His_Me_endon, e-value not sig /note=NCBI BLAST: hits with HNH endonuclease [Arthrobacter phage Ranunculus], e-value sig /note=Start Codon: Kept the same, only option left CDS complement (40364 - 40582) /note=Phagesdb Function: hits with lysin b, subcluster DU2, 100% frequency /note=Phagesdb BLAST: hits with Pureglobe5, cluster AP2, function unknown, e-value sig /note=HHPRED: hits with DUF2188 ; Uncharacterized protein conserved in bacteria, e-value not sig /note=NCBI BLAST: hits with PureGlobe5, hypothetical protein, e-value sig /note=Start Codon: kept the same 1:1 ratio with NCBI CDS complement (40579 - 40995) /note=Phagesdb Function: hits with dna primase/polymerase, subcluster BU, 31% frequency /note=Phagesdb BLAST: hits with Ranunculus, cluster AP, function unknown, e-value sig /note=HHPRED: hits with EDR4-like_1st, e-value not sig /note=NCBI BLAST: hits with Ranunculus, hypothetical protein, e-value sig CDS complement (40992 - 41285) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Ranunculus, cluster AP, function unknown, e-value sig /note=HHPRED: hits with Nif11 ; Nif11 domain, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, Ranunculus, e-value sig CDS complement (41282 - 41605) /note=Phagesdb Function: hits with helix-turn-helix dna binding domain, subcluster AP4, 50% frequency /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with Thermosynechococcus elongatus BP-1, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig CDS complement (41602 - 41832) /note=Phagesdb Function: hits with hnh endonuclease, subcluster DC1, 42% frequency /note=Phagesdb BLAST: hits with AWGoat, cluster AP4, helix-turn-helix DNA binding domain, e-value sig /note=HHPRED: hits with Streptococcus suis (strain 05ZYH33), e-value not sig /note=NCBI BLAST: hits with helix-turn-helix DNA binding domain [Arthrobacter phage AWGoat], e-value sig CDS complement (41829 - 42209) /note=Phagesdb Function: hits with integrase, (y-int), subcluster DI, 53% frequency /note=Phagesdb BLAST: hits with MellowYellow, function unknown, AP2 cluster, e-value sig /note=HHPRED: hits with Domain of unknown function, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig CDS complement (42206 - 42649) /note=Phagesdb Function: hits with minor tail protein, subcluster J, 94% frequency /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with Domain of unknown function, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig CDS complement (42646 - 42852) /note=Phagesdb Function: hits with N/A /note=Phagesdb BLAST: hits with MellowYellow, function unknown, e-value sig /note=HHPRED: hits with MqsA; antitoxin MqsA for MqsR toxin; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig CDS complement (42852 - 43106) /note=Phagesdb Function: hits with tape measure protein, subcluster EF, 86% frequency /note=Phagesdb BLAST: hits with MellowYellow, hypothetical protein, cluster AP2, e-value sig /note=HHPRED: hits with a.22.1.3 (A:) TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig /note=Start Codon: Kept the same, 1:1 ratio NCBI CDS complement (43103 - 43411) /note=Phagesdb Function: hits with portal protein, subcluster G5, 100% frequency /note=Phagesdb BLAST: hits with Judy, function unknown, cluster FA, e-value sig /note=HHPRED: hits with PGDYG ; PGDYG protein, e-value not sig /note=NCBI BLAST: hits with Judy, hypothetical protein, e-value sig /note= /note=Start postion changed to Reverse 43411; 1:1 hits with BLAST with AP2 phages CDS complement (43408 - 43716) /note=Phagesdb Function: hits with helix-turn-helix dna-binding domain protein, cluster BI1, 33% frequency /note=Phagesdb BLAST: hits with BruhMoment, cluster AP3, function unknown /note=HHPRED: hits with Malonyl CoA-acyl carrier protein transacylase; e-value not sig /note=NCBI BLAST: hits with BruhMoment, hypothetical protein, e-value sig CDS complement (43716 - 44264) /note=Phagesdb Function: hits with head-to-tail adaptor, subcluster A16, 50% frequency /note=Phagesdb BLAST: hits with BruhMoment, function unknown, e-value sig /note=HHPRED: hits with a.152.1.3 (A:1-190) Uncharacterized protein TM1040_2465; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, BruhMoment, e-value sig CDS complement (44298 - 44516) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with Sigma_reg_C, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig CDS complement (44513 - 45070) /note=Phagesdb Function: hits with terminase, large subunit, subcluster CT, 71% frequency /note=Phagesdb BLAST: MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with 60S ribosomal export protein NMD3; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig CDS complement (45067 - 45618) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Beagle, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with family of unknown function, e-value sig /note=NCBI BLAST: hits with hypothetical protein, Odyssey395, e-value sig CDS complement (45679 - 45918) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Pointis, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with bPH_4 ; Bacterial PH domain; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, Pointis, e-value sig CDS complement (45915 - 46232) /note=Phagesdb Function: hits with exonuclease, subcluster AP1, 11% frequency /note=Phagesdb BLAST: hits with Beagle, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with family of unknown function; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, Beagle, e-value sig CDS complement (46229 - 46405) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13; e-value not sig /note=NCBI BLAST: hits with membrane protein, MellowYellow, e-value sig /note= /note=double check DeepTMHMM; one membrane protein domain found on DeepTMHMM; confirmed with SOSUI CDS complement (46402 - 46710) /note=Phagesdb Function: hits with lysin a, subcluster B4, 80% frequency /note=Phagesdb BLAST: hits with Pointis, cluster AP2, function unknown, e-value sig /note=HHPRED: hits with Small soluble cyt c; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, PureGlobe5, e-value sig /note=Start codon: changed to reverse 46653; best option of candidates CDS complement (46703 - 47872) /note=Phagesdb Function: hits with cas4 exonuclease, cluster AP2, 4% frequency /note=Phagesdb BLAST: hits with MellowYellow, cluster AP2, Cas4 exonuclease, e-value sig /note=HHPRED: hits with Cas4_I-A_I-B_I-C_I-D_II-B; e-value sig /note=NCBI BLAST: hits with Cas4 exonuclease, MellowYellow, e-value sig /note= /note=Only found in MellowYellow CDS complement (48086 - 48994) /note=Phagesdb Function: hits with reca-like dna recombinase, subcluster AP2, 4% frequency /note=Phagesdb BLAST: hits with Odyssey395, cluster AP2, e-value sig, RecA-like DNA recombinase /note=HHPRED: hits with DNA repair and recombination protein RAD52; e-value sig /note=NCBI BLAST: hits with RecA-like DNA recombinase [Arthrobacter phage Pureglobe5]; e-value sig /note= /note=Maybe two options CDS complement (49148 - 49360) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with MellowYellow, cluster AP2, function unknown, e-value sig /note=HHPRED: hits with Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig CDS complement (49363 - 49851) /note=Phagesdb Function: hnh endonuclease, cluster AP3, 1% frequency /note=Phagesdb BLAST: hits with BruhMoment, hnh endonuclease, cluster AP3, e-value sig /note=HHPRED: hits with HNH homing endonuclease, e-value sig /note=NCBI BLAST: hits with HNH endonuclease [Arthrobacter phage BruhMoment]; e-value sig CDS complement (49848 - 50399) /note=Phagesdb Function: hits with mazg-like nucleotide pyrophosphohydrolase, cluster AP3, 1% frequency /note=Phagesdb BLAST: hits with AbbyDaisy, cluster AY, MazG-like nucleotide pyrophosphohydrolase, e-value sig /note=HHPRED: hits with all-alpha NTP pyrophosphatases, FAM: MazG-like; e-value sig /note=NCBI BLAST: hits with MazG-like nucleotide pyrophosphohydrolase [Arthrobacter phage BruhMoment]; e-value sig CDS complement (50440 - 50646) /note=Phagesdb Function: hits with scaffolding protein, cluster BF, 100% frequency /note=Phagesdb BLAST: hits with Beagle, cluster AP2, function unknown, e-value sig /note=HHPRED: hits with Binary_toxB_3 ; Clostridial binary toxin B/anthrax toxin PA domain 3; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, Beagle, e-value sig CDS 50850 - 50975 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: N/A /note=HHPRED: Hits with ChAPs ; ChAPs (Chs5p-Arf1p-binding proteins); e-value not sig /note=NCBI BLAST: N/A CDS complement (50969 - 51169) /note=Phagesdb Function: hits with dna helicase, cluster FK, 100% frequency /note=Phagesdb BLAST: hits with Pureglobe5, cluster AP2, fucntion unknown, e-value sig /note=HHPRED: hits with Probable transcriptional regulator, e-value not sig /note=NCBI BLAST: hits with hypothetical protein, PureGlobe5, e-value sig CDS complement (51166 - 51519) /note=Phagesdb Function: hits with minor tail protein, subcluster DE1, 94% frequency /note=Phagesdb BLAST: hits with Beagle, cluster AP2, function unknown, e-value sig /note=HHPRED: hits with Protein of unknown function; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, Beagle, e-value sig CDS complement (51516 - 52100) /note=Phagesdb Function: hits with hnh endonuclease, cluster C1, 41% frequency /note=Phagesdb BLAST: hits with BillyTP, hnh endonuclease, cluster AY, e-value sig /note=HHPRED: hits with Ethylene-responsive transcription factor WRI1; e-value not sig /note=NCBI BLAST: hits with HNH endonuclease; e-value sig /note=Start: change to reverse 52100; best candidate without huge gaps /note= /note=skeptical CDS complement (52133 - 52585) /note=Phagesdb Function: hits with dna binding protein, cluster AP2, 10% frequency /note=Phagesdb BLAST: hits with Beagle, DNA binding protein, cluster AP2, e-value sig /note=HHPRED: hits with PUTATIVE TRANSCRIPTIONAL REGULATOR; e-value sig /note=NCBI BLAST: hits with DNA binding protein, MellowYellow, e-value sig /note=Start: change to reverse 52585; best candidate CDS complement (52621 - 53217) /note=Phagesdb Function: hits with tape measure protein, subcluster DG1, 63% frequency /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with sohair; protein design, receptor modulator, GCSF analog, DE NOVO PROTEIN; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig /note=Start: change to reverse 53217; best candidate without huge gaps CDS complement (53217 - 53591) /note=Phagesdb Function: hits with major capsid protein, subcluster DB, 33% frequency /note=Phagesdb BLAST: hits with Odyssey395, cluster AP2, function unknown, e-value sig /note=HHPRED: hits with DUF3846 ; Domain of unknown function; e-value sig /note=NCBI BLAST: hits with hypothetical protein, PureGlobe5, e-value sig CDS complement (53641 - 54081) /note=Phagesdb Function: hits with capsid maturation protease, subcluster DA, 33% frequency /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with DUF6205 ; Family of unknown function; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig CDS complement (54094 - 55695) /note=Phagesdb Function: hits with dna primase/helicase, cluster AP2, 4% frequency /note=Phagesdb BLAST: hits with Beagle, DNA primase/polymerase/helicase, cluster AP2, e-value sig /note=HHPRED: hits with DNA primase/helicase; e-value sig /note=NCBI BLAST: hits with DNA primase/polymerase/helicase, Odyssey395, e-value sig CDS complement (55735 - 56487) /note=Phagesdb Function: hits with helix-turn-helix dna binding domain, cluster AP2, 6%% frequency /note=Phagesdb BLAST: hits with MellowYellow, helix-turn-helix DNA binding domain, cluster AP2, e-value sig /note=HHPRED: hits with DNA replication protein DnaD; e-value not sig /note=NCBI BLAST: hits with helix-turn-helix DNA binding domain protein [Arthrobacter phage Pointis], e-value sig CDS complement (56763 - 57263) /note=Phagesdb Function: hits with major capsid hexamer protein, cluster AP4, 2% frequency /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with De novo designed protein; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig CDS complement (57332 - 57958) /note=Phagesdb Function: hits with ssdna binding protein, cluster AP2, 2% frequency /note=Phagesdb BLAST: hits with Ranunculus, SSB protein, cluster AP, e-value sig /note=HHPRED: hits with Single-stranded DNA-binding protein; e-value sig /note=NCBI BLAST: hits with single-stranded DNA-binding protein [Arthrobacter echini]; e-value sig /note= /note=Double check CDS complement (57964 - 58092) /note=Phagesdb Function: hits with hnh endonuclease, cluster F1, 44% frequency /note=Phagesdb BLAST: hits Byougenkin, HNH endonuclease protein, cluster F1, e-value not sig /note=HHPRED: hits with a.3.1.0 (A:) automated matches; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, e-value sig CDS complement (58111 - 58434) /note=Phagesdb Function: hits with hnh endonuclease, cluster AR, 19% frequency /note=Phagesdb BLAST: hits with Conboy, HNH endonuclease, cluster AR, e-value sig /note=HHPRED: hits with zf-His_Me_endon ; e-value sig /note=NCBI BLAST: hits with HNH endonuclease [Streptomyces canus]; e-value sig CDS complement (58431 - 58730) /note=Phagesdb Function: hits with terminase, cluster K6, 100% frequency /note=Phagesdb BLAST: hits with Beagle, cluster AP2, function unknown, e-value sig /note=HHPRED: hits with Ldt_C ; L,D-transpeptidase C-terminal domain; e-value not sig /note=NCBI BLAST: hits with hypothetical protein[Arthrobacter phage Odyssey395]; e-value sig CDS complement (58875 - 59279) /note=Phagesdb Function: hits with rect-like ssdna binding protein; subcluster Q, 15% frequency /note=Phagesdb BLAST: hits with Pureglobe5; cluster AP2, function unknown, e-value sig /note=HHPRED: hits with Nmad5 ; Nucleotide modification associated domain 5; e-value not sig /note=NCBI BLAST: hypothetical protein[Arthrobacter phage Pointis]; e-value sig CDS complement (59386 - 60723) /note=Phagesdb Function: hits with rna ligase, cluster DE3, 23% frequency /note=Phagesdb BLAST: hits with Ranunculus, function unknown, cluster AP, e-value sig /note=HHPRED: hits with DUF6319 ; Family of unknown function; e-value not sig /note=NCBI BLAST: hits with hypothetical protein [Arthrobacter phage Odyssey395]; e-value sig CDS complement (60749 - 61675) /note=Phagesdb Function: hits with major tail protein, cluster A4, 34% frequency /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with Rho guanine nucleotide exchange factor Pleckstrin homology domain; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, MellowYellow, e-value sig CDS complement (61712 - 61957) /note=Phagesdb Function: hits with minor tail protein, cluster DO, 67% frequency /note=Phagesdb BLAST: hits with Beagle, cluster AP2, function unknown, e-value sig /note=HHPRED: hits with d.348.1.0 (A:) automated matches; e-value not sig /note=NCBI BLAST: hits with hypothetical protein, Beagle, e-value sig CDS complement (61950 - 62150) /note=Phagesdb Function: hits with minor tail protein, subcluster B3, 89% frequency /note=Phagesdb BLAST: hits with Beagle, cluster AP2, function unknown, e-value sig /note=HHPRED: hits with Myb_DNA-bind_8 ; Myb-like DNA-binding domain; e-value not sig /note=NCBI BLAST: hits with hypothetical protein [Arthrobacter phage Beagle]; e-value sig CDS complement (62134 - 62784) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with oligomycin sensitiviy conferring protein; e-value not sig /note=NCBI BLAST: hits with hypothetical protein [Arthrobacter phage MellowYellow]; e-value sig CDS complement (62920 - 63174) /note=Phagesdb Function: hits with helix-turn-helix dna binding domain, cluster AK, 60% frequency /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with DNA-invertase; helix-turn-helix, site-specific recombinase, RECOMBINATION; e-value not sig /note=NCBI BLAST: hits with hypothetical protein [Arthrobacter phage Pureglobe5]; e-value sig CDS complement (63174 - 63578) /note=Phagesdb Function: hits with minor tail protein, cluster K3, 67% frequency /note=Phagesdb BLAST: hits with Ranunculus, cluster AP, function unknown, e-value sig /note=HHPRED: hits with PcRGLX_1st ; PcRGLX-like N-terminal RIFT barrel domain; e-value not sig /note=NCBI BLAST: hits with hypothetical protein [Arthrobacter phage Ranunculus]; e-value sig CDS complement (63616 - 64287) /note=Phagesdb Function: hits with minor tail protein, cluster A1, 96% frequency /note=Phagesdb BLAST: hits with Beagle, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with IMP2_N ; Immune Mapped Protein 2 (IMP2) N-terminal domain; e-value not sig /note=NCBI BLAST: hits with hypothetical protein [Arthrobacter phage Pureglobe5]; e-value sig CDS complement (64347 - 64769) /note=Phagesdb Function: hits with minor tail protein, cluster B3, 33% frequency /note=Phagesdb BLAST: hits with AbbyDaisy, cluster AY, function unknown, e-value sig /note=HHPRED: hits with DUF669 ; Protein of unknown function (DUF669); e-value not sig /note=NCBI BLAST: hits with hypothetical protein [Arthrobacter sp. JSM 101049]; e-value sig CDS complement (64766 - 65014) /note=Phagesdb Function: hits with helicase loader, subcluster FH, 100% frequency /note=Phagesdb BLAST: hits with BruhMoment, cluster AP3, function unknown, e-value sig /note=HHPRED: hits with Csm1 ; Chromosome segregation protein Csm1/Pcs1; e-value not sig /note=NCBI BLAST: hits with hypothetical protein [Arthrobacter phage BruhMoment]; e-value sig CDS complement (65011 - 65844) /note=Phagesdb Function: hits with tail assembly chaperone, cluster DR, 33% frequency /note=Phagesdb BLAST: hits with Beagle, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with DUF3039 ; Protein of unknown function; e-value not si /note=NCBI BLAST: hits with hypothetical protein [Arthrobacter phage Odyssey395]; e-value sig CDS 66137 - 66274 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: N/A /note=HHPRED: hits with NADH-ubiquinone oxidoreductase 1, chain, putative; e-value not sig /note=NCBI BLAST: N/A CDS complement (66023 - 66157) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Ranunculus, cluster AP, function unknown, e-value sig /note=HHPRED: hits with CYTOCHROME C OXIDASE; Membrane Protein; e-value not sig /note=NCBI BLAST: hypothetical protein [Arthrobacter phage Ranunculus]; e-value not sig CDS complement (66154 - 66261) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: N/A /note=HHPRED: CYYR1 ; Cysteine and tyrosine-rich protein 1; E-VALUE NOT SIG /note=NCBI BLAST: N/A CDS complement (66258 - 66533) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: Beagle, FUNCTION UKNOWN, CLUSTER AP2, E-VALUE SIG /note=HHPRED: Phenylacetate-CoA oxygenase subunit PaaB; E-VALUE NOT SIG /note=NCBI BLAST: hypothetical protein [Arthrobacter phage Beagle]; E-VALUE SIG CDS complement (66567 - 66716) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: N/A /note=HHPRED: G domain-containing protein; E-VALUE NOT SIG /note=NCBI BLAST: N/A CDS complement (66720 - 66845) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: MellowYellow; function unknown; cluster AP2, e-value sig /note=HHPRED: Beta-dystroglycan; e-value not sig /note=NCBI BLAST: hits with membrane protein [Arthrobacter phage MellowYellow]; e-value sig /note=One membrane hit with DeepTMHMM; Using SOSUI, able to call it a membrane protein; Change function to membrane protein /note= /note=double check CDS complement (66842 - 67084) /note=Phagesdb Function: hnh endonuclease; cluster DE1; 100% frequency /note=Phagesdb BLAST: MellowYellow; cluster AP, function unknown, e-value sig /note=HHPRED: YajC ; Preprotein translocase subunit; e-value not sig /note=NCBI BLAST: hypothetical protein [Arthrobacter phage MellowYellow]; e-value sig CDS complement (67349 - 67774) /note=Phagesdb Function: helix-turn-helix dna binding domain; cluster AN; 60% frequency /note=Phagesdb BLAST: Beagle; function unknown; AP2; e-value sig /note=HHPRED: Uncharacterized lipoprotein YifL; e-value not sig /note=NCBI BLAST: hypothetical protein [Arthrobacter phage Beagle]; e-value sig CDS complement (67823 - 67993) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: Odyssey395; AP2, FUNCTION UNKNOWN; E-VALUE SIG /note=HHPRED: GcrA ; GcrA cell cycle regulator; E-VALUE NOT SIG /note=NCBI BLAST: hypothetical protein [Arthrobacter phage Odyssey395]; E-VALUE NOT SIG CDS complement (67990 - 68154) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: Ranunculus; CLUSTER AP; FUNCTION UNKNOWN; E-VALUE SIG /note=HHPRED: FYDLN_acid ; Protein of unknown function (FYDLN_acid); FUNCTION UNKNOWN /note=NCBI BLAST: hypothetical protein [Arthrobacter phage Ranunculus]; E-VALUE SIG CDS complement (68154 - 68339) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: Ranunculus; CLUSTER AP; FUNCTION UNKNOWN; E-VALUE SIG /note=HHPRED: FNR_like; E-VALUE NOT SIG /note=NCBI BLAST: hypothetical protein [Arthrobacter phage Ranunculus]; E-VALUE SIG CDS complement (68386 - 68622) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with Pureglobe5, cluster AP2, function unknown, e-value sig /note=HHPRED: hits with DUF4132 ; Domain of unknown function (DUF4132); e-value not sig /note=NCBI BLAST: hypothetical protein [Arthrobacter phage Beagle]; e-value sig CDS 68771 - 68884 /note=Phagesdb Function: N/A /note=Phagesdb BLAST: N/A /note=HHPRED: Hits with PSV_trans_reg_dom ; PSV, transcriptional regulator domain; e-value not sig /note=NCBI BLAST: N/A CDS complement (68662 - 68808) /note=Phagesdb Function: N/A /note=Phagesdb BLAST: hits with MellowYellow, function unknown, cluster AP2, e-value sig /note=HHPRED: hits with zf_UBZ ; Ubiquitin-Binding Zinc Finger; e-value not sig /note=NCBI BLAST: hypothetical protein [Arthrobacter phage MellowYellow]; e-value sig Genes added in gaps (Only added in the DNA Master Minimal file): • SEA_OLLYPOP_14 (5474-5974): helix-turn-helix DNA binding domain • SEA_OLLYPOP_78 (50646-50972; Reverse): HNH endonuclease Deleted phams in the DNA MASTER minimal file (Genes not deleted in PECAAN) • Gene 1: The first gene in PECAAN is reversed from 372 to 70003. This gene does not appear to be annotated in other cluster AP phages. This gene was deleted in the DNA Master minimal file. • Genes 79, 106, 118: Deleted in the DNA Master minimal file. Overlaps with reverse genes. AP phages appear to mostly have genes encoded on the top strand through the first 36-38k nucleotides and reverse genes on the right side of the genome.