Gordonia phage ASerpRocky
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Detailed Information for Phage ASerpRocky
Discovery Information
Isolation HostGordonia westfalica NRRL B-24152
Found ByLexi Marx
Year Found2016
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.444285 N, 79.955213 W Map
Discovery NotesThis sample was found in the crevice of a sidewalk near a bench.
Naming NotesThis phage is named after/dedicated to Adam Serpa.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 26, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage745
Genome length (bp)74355
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length1189 bp
GC Content59.2%
Sequencing NotesBuildup of reads flanking region of increased coverage.
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS4
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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ASerpRocky_1

ASerpRocky_2

ASerpRocky_3
(DNA binding protein)

ASerpRocky_4

ASerpRocky_5

ASerpRocky_6

ASerpRocky_7
(DNA primase)

ASerpRocky_8
(DNA primase)

ASerpRocky_9

ASerpRocky_10
(terminase)

ASerpRocky_11
(portal protein)

ASerpRocky_12
(minor tail protein)

ASerpRocky_13

ASerpRocky_14
(capsid maturation protease)

ASerpRocky_15
(capsid decoration protein)

ASerpRocky_16
(major capsid protein)

ASerpRocky_17

ASerpRocky_18

ASerpRocky_19
(head-to-tail adaptor)

ASerpRocky_20

ASerpRocky_21

ASerpRocky_22

ASerpRocky_23
(major tail protein)

ASerpRocky_24
(tail assembly chaperone)

ASerpRocky_25
(tail assembly chaperone)

ASerpRocky_26
(tape measure protein)

ASerpRocky_27
(minor tail protein)

ASerpRocky_28
(minor tail protein)

ASerpRocky_29
(minor tail protein)

ASerpRocky_30

ASerpRocky_31

ASerpRocky_32

ASerpRocky_33
(lysin A, N-acetylmuramoyl-L-alanine amidase domain)

ASerpRocky_34
(lysin A, protease M23 domain)

ASerpRocky_35

ASerpRocky_36

ASerpRocky_37

ASerpRocky_38

ASerpRocky_39
(Cas4 family exonuclease)

ASerpRocky_40
(WhiB family transcription factor)

ASerpRocky_41

ASerpRocky_42

ASerpRocky_43
(DNA methylase)

ASerpRocky_44
(lysin B)

ASerpRocky_45
(MazG-like nucleotide pyrophosphohydrolase)

ASerpRocky_46

ASerpRocky_47

ASerpRocky_48
(nucleoside deoxyribosyltransferase)

ASerpRocky_49
(DNA polymerase III sliding clamp)

ASerpRocky_50

ASerpRocky_51

ASerpRocky_52
(helix-turn-helix DNA binding protein)

ASerpRocky_53

ASerpRocky_54

ASerpRocky_55

ASerpRocky_56
(DNA binding protein)

ASerpRocky_57

ASerpRocky_58

ASerpRocky_59

ASerpRocky_60

ASerpRocky_61

ASerpRocky_62

ASerpRocky_63

ASerpRocky_64

ASerpRocky_65

ASerpRocky_66

ASerpRocky_67

ASerpRocky_68

ASerpRocky_69

ASerpRocky_70

ASerpRocky_71

ASerpRocky_72
(HNH endonuclease)

ASerpRocky_73

ASerpRocky_74

ASerpRocky_75

ASerpRocky_76
(CobT-like cobalamin biosynthesis protein)

ASerpRocky_77

ASerpRocky_78

ASerpRocky_79
(AAA-ATPase)

ASerpRocky_80

ASerpRocky_81

ASerpRocky_82

ASerpRocky_83

ASerpRocky_84

ASerpRocky_85

ASerpRocky_86

ASerpRocky_87

ASerpRocky_88

ASerpRocky_89

ASerpRocky_90

ASerpRocky_91

ASerpRocky_92

ASerpRocky_93

ASerpRocky_94

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN234166
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 5
Pitt Freezer Box Grid# E2
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload