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Arthrobacter phage Abba
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Detailed Information for Phage Abba
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByDavid Bojorquez
Year Found2019
Location FoundLos Angeles, CA USA
Finding InstitutionUniversity of California, Los Angeles
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature25°C
GPS Coordinates34.067996 N, 118.450765 W Map
Discovery NotesArthrobacter phage ABBA was isolated from soil by enrichment plating at 25°C from dry surface soil. The sample was collected by David Bojorquez in Los Angeles. The phage was isolated and characterized by Team Bruinfluenza (Jasmine Alcantara, Cara Budzinski, David Bojorquez, & Jose Arambulo) and Team Legal Drinking Phage (Manreet Dosanjh, Gillian Campbell, Olivia Yee, Miguel Gallardo).

Instructor: Amanda Freise
Teaching Assistant: Ryan Ngo
Naming NotesEach letter of our phage name comes from our last name initials (and because Ryan played the song “Mamma Mia” a handful of times in class).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 3, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1921
Genome length (bp)46623
Character of genome endsCircularly Permuted
GC Content65.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAO
SubclusterAO3
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of California, Los Angeles
Annotation StatusIn GenBank
Plaque NotesDescription of plaque morphology: clear

Average size (and size range) diameter in mm: 1.5-3mm
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT024868
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 116
Pitt Freezer Box Grid# C1
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload