| Detailed Information for Phage Abba |
| Discovery Information |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | David Bojorquez |
| Year Found | 2019 |
| Location Found | Los Angeles, CA USA |
| Finding Institution | University of California, Los Angeles |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 25°C |
| GPS Coordinates | 34.067996 N, 118.450765 W Map |
| Discovery Notes | Arthrobacter phage ABBA was isolated from soil by enrichment plating at 25°C from dry surface soil. The sample was collected by David Bojorquez in Los Angeles. The phage was isolated and characterized by Team Bruinfluenza (Jasmine Alcantara, Cara Budzinski, David Bojorquez, & Jose Arambulo) and Team Legal Drinking Phage (Manreet Dosanjh, Gillian Campbell, Olivia Yee, Miguel Gallardo).
Instructor: Amanda Freise
Teaching Assistant: Ryan Ngo |
| Naming Notes | Each letter of our phage name comes from our last name initials (and because Ryan played the song “Mamma Mia” a handful of times in class). |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 3, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1921 |
| Genome length (bp) | 46623 |
| Character of genome ends | Circularly Permuted |
| GC Content | 65.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AO |
| Subcluster | AO3 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of California, Los Angeles |
| Annotation Status | In GenBank |
| Plaque Notes | Description of plaque morphology: clear
Average size (and size range) diameter in mm: 1.5-3mm |
| Morphotype | Myoviridae |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT024868 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
116 |
| Pitt Freezer Box Grid# |
C1 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
