Gordonia phage Ayotoya
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Ayotoya
Discovery Information
Isolation HostGordonia terrae 3612
Found ByDamilola Ayoola
Year Found2019
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.444317 N, 79.957264 W Map
Discovery NotesThe soil was cold to the touch and there was a live worm in it.
Naming NotesFrom a derivation of my last name
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 19, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage581
Genome length (bp)50854
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTGCCGCGGTA
GC Content67.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDI
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesAll the same morphology
Approximatly 2 mm
Has been Phamerated?Yes
Gene List

Click to View

Ayotoya_1
(HNH endonuclease)

Ayotoya_2

Ayotoya_3

Ayotoya_4

Ayotoya_5
(terminase, small subunit)

Ayotoya_6
(terminase, large subunit)

Ayotoya_7
(portal protein)

Ayotoya_8
(capsid maturation protease)

Ayotoya_9
(scaffolding protein)

Ayotoya_10
(major capsid protein)

Ayotoya_11

Ayotoya_12
(head-to-tail adaptor)

Ayotoya_13
(head-to-tail stopper)

Ayotoya_14
(tail terminator)

Ayotoya_15

Ayotoya_16
(major tail protein)

Ayotoya_17

Ayotoya_18
(tail assembly chaperone)

Ayotoya_19
(tail assembly chaperone)

Ayotoya_20
(tape measure protein)

Ayotoya_21
(minor tail protein)

Ayotoya_22
(minor tail protein)

Ayotoya_23

Ayotoya_24
(minor tail protein)

Ayotoya_25
(minor tail protein)

Ayotoya_26

Ayotoya_27

Ayotoya_28

Ayotoya_29
(lysin A, protease C39 domain)

Ayotoya_30
(lysin A, glycosyl hydrolase domain)

Ayotoya_31

Ayotoya_32

Ayotoya_33

Ayotoya_34
(antitoxin in toxin/antitoxin system, HicB like)

Ayotoya_35
(toxin in toxin/antitoxin system, HicA-like)

Ayotoya_36

Ayotoya_37

Ayotoya_38

Ayotoya_39
(tyrosine integrase)

Ayotoya_40
(immunity repressor)

Ayotoya_41
(helix-turn-helix DNA binding domain protein)

Ayotoya_42
(helix-turn-helix DNA binding domain protein)

Ayotoya_43

Ayotoya_44

Ayotoya_45

Ayotoya_46

Ayotoya_47
(exonuclease)

Ayotoya_48

Ayotoya_49

Ayotoya_50

Ayotoya_51

Ayotoya_52

Ayotoya_53

Ayotoya_54

Ayotoya_55

Ayotoya_56

Ayotoya_57

Ayotoya_58

Ayotoya_59

Ayotoya_60

Ayotoya_61

Ayotoya_62

Ayotoya_63

Ayotoya_64
(metallophosphoesterase)

Ayotoya_65

Ayotoya_66
(nucleoside deoxyribosyltransferase)

Ayotoya_67
(methyltransferase)

Ayotoya_68

Ayotoya_69

Ayotoya_70
(DNA primase)

Ayotoya_71
(endonuclease VII)

Ayotoya_72

Ayotoya_73
(helix-turn-helix DNA binding domain protein)

Ayotoya_74
(HNH endonuclease)

Ayotoya_75

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW534376
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4.4*10^11
Pitt Freezer Box# 113
Pitt Freezer Box Grid# F3
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload