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Mycobacterium phage BAKA
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Detailed Information for Phage BAKA
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAmy Vogelsberger
Year Found2005
Location FoundFort Bragg, NC USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates35.139283 N, 78.999624 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 11, 2011
Sequencing FacilityPittsburgh Bacteriophage Institute
Genome length (bp)111688
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
Overhang SequenceATCC
GC Content60.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterJ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes245
Number of tRNAs1
Has been Phamerated?Yes
Gene List

Click to View

BAKA_1

BAKA_2
(terminase small subunit)

BAKA_3

BAKA_4

BAKA_5

BAKA_6
(terminase large subunit)

BAKA_7

BAKA_8
(portal protein)

BAKA_9
(capsid maturation protease)

BAKA_10
(major capsid protein)

BAKA_11

BAKA_12
(kinase domain protein)

BAKA_13
(methyl transferase)

BAKA_14
(glycosyl transferase)

BAKA_15

BAKA_16
(galactosyl transferase)

BAKA_17

BAKA_18

BAKA_19

BAKA_20
(glucosyltransferase domain protein)

BAKA_21

BAKA_22
(head-to-tail adaptor)

BAKA_23
(head-to-tail stopper)

BAKA_24

BAKA_25
(tail terminator)

BAKA_26

BAKA_27

BAKA_28
(major tail subunit)

BAKA_29
(tail assembly chaperone)

BAKA_30
(tail assembly chaperone)

BAKA_31
(tapemeasure protein)

BAKA_32

BAKA_33
(minor tail protein)

BAKA_34
(minor tail protein)

BAKA_35
(minor tail protein)

BAKA_36
(minor tail protein)

BAKA_37
(minor tail protein)

BAKA_38

BAKA_39

BAKA_40

BAKA_41

BAKA_42

BAKA_43

BAKA_44

BAKA_45

BAKA_46

BAKA_47

BAKA_48
(structural protein)

BAKA_49

BAKA_50
(HNH endonuclease domain protein)

BAKA_51
(lysin A)

BAKA_52

BAKA_53
(lysin B)

BAKA_54
(holin)

BAKA_55

BAKA_56
(NrdH)

BAKA_57

BAKA_58

BAKA_59

BAKA_60

BAKA_61

BAKA_62

BAKA_63
(Lsr2)

BAKA_64

BAKA_65

BAKA_66

BAKA_67

BAKA_68

BAKA_69

BAKA_70
(peptidyl-tRNA hydrolase)

BAKA_71

BAKA_72

BAKA_73

BAKA_74

BAKA_75

BAKA_76

BAKA_77

BAKA_78

BAKA_79

BAKA_80

BAKA_81

BAKA_82

BAKA_83

BAKA_84

BAKA_85
(putative excise)

BAKA_86
(integrase)

BAKA_87

BAKA_88
(endonuclease VII)

BAKA_89

BAKA_90

BAKA_91

BAKA_92

BAKA_93

BAKA_94

BAKA_95

BAKA_96

BAKA_97

BAKA_98

BAKA_99

BAKA_100

BAKA_101

BAKA_102
(LipC)

BAKA_103

BAKA_104

BAKA_105

BAKA_106

BAKA_107

BAKA_108

BAKA_109

BAKA_110

BAKA_111

BAKA_112

BAKA_113

BAKA_114

BAKA_115

BAKA_116

BAKA_117

BAKA_118
(AddA-like protein)

BAKA_119

BAKA_120

BAKA_121
(DNA methylase)

BAKA_122
(HNH endonuclease domain protein)

BAKA_123

BAKA_124

BAKA_125

BAKA_126

BAKA_127

BAKA_128
(polynucleotide kinase)

BAKA_129

BAKA_130
(endonuclease VII)

BAKA_131
(WhiB family transcription factor)

BAKA_132

BAKA_133

BAKA_134

BAKA_135

BAKA_136

BAKA_137
(DNA primase)

BAKA_138

BAKA_139

BAKA_140

BAKA_141

BAKA_142

BAKA_143

BAKA_144

BAKA_145

BAKA_146

BAKA_147

BAKA_148

BAKA_149
(RecA)

BAKA_150
(HNH endonuclease)

BAKA_151
(DNA methylase domain protein)

BAKA_152

BAKA_153

BAKA_154

BAKA_155

BAKA_156

BAKA_157

BAKA_158
(RNA ligase)

BAKA_159
(ClpP-like protease)

BAKA_160
(DnaQ-like DNA exonuclease)

BAKA_161

BAKA_162

BAKA_163

BAKA_164

BAKA_165

BAKA_166

BAKA_167

BAKA_168

BAKA_169
(putative phosphoadenosine phosphosulfate reductase)

BAKA_170

BAKA_171

BAKA_172

BAKA_173

BAKA_174

BAKA_175

BAKA_176

BAKA_177

BAKA_178

BAKA_179

BAKA_180

BAKA_181
(PP2Ac)

BAKA_182

BAKA_183

BAKA_184

BAKA_185

BAKA_186

BAKA_187

BAKA_188

BAKA_189

BAKA_191

BAKA_192

BAKA_193
(HIT domain protein)

BAKA_194

BAKA_195

BAKA_196

BAKA_197

BAKA_198

BAKA_199

BAKA_200

BAKA_201

BAKA_202

BAKA_203

BAKA_204

BAKA_205
(FtsK)

BAKA_206

BAKA_207

BAKA_208

BAKA_209

BAKA_210
(Ku)

BAKA_211

BAKA_212

BAKA_213

BAKA_214

BAKA_215

BAKA_216

BAKA_217

BAKA_218
(DNA binding protein)

BAKA_219

BAKA_220

BAKA_221

BAKA_222

BAKA_223

BAKA_224

BAKA_225

BAKA_226

BAKA_227

BAKA_228

BAKA_229

BAKA_230

BAKA_231

BAKA_232

BAKA_233

BAKA_234

BAKA_235

BAKA_236

BAKA_237

BAKA_238

BAKA_239

BAKA_240

BAKA_241

BAKA_242

BAKA_243

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJF937090
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 1
Pitt Freezer Box Grid# B9
Available Files
Virtual Digest PictureDownload
EM PictureDownload