Gordonia phage Chikenjars
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Detailed Information for Phage Chikenjars
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByJane Frank, Sarah Hoagland, Nicholas Lee
Year Found2018
Location FoundLincoln, NE USA
Finding InstitutionUniversity of Nebraska-Lincoln
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature25°C
GPS Coordinates40.828025 N, 96.693583 E Map
Discovery NotesCollected at the Holdrege trail lot, just outside the University of Nebraska-Lincoln campus. Surface soil was collected for the sample.
Naming NotesThe name includes all the letters of the names: Sarah, Jane, & Nick; these are the names of the students working with the phage.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 3, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage735
Genome length (bp)61544
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGCTCT
GC Content51.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDJ
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusOverdue (Expected completion by 5/15/2019)
Plaque NotesPlaques are turbid, with a radius of 0.85mm. Areas of turbidity and cloudiness often are much larger than areas of central clearing.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 77
Pitt Freezer Box Grid# G12
Available Files
Plaque PictureDownload
EM PictureDownload