Microbacterium phage ClearAsMud
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Detailed Information for Phage ClearAsMud
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found ByMichael Reeves
Year Found2020
Location FoundLa Sierra, CA USA
Finding InstitutionLa Sierra University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature23°C
GPS Coordinates33.910341 N, 117.495575 W Map
Discovery NotesCollected at 1 pm. Wet soil near water, lots of bugs, worms, decomposing leaves, and mulch. There was no rain on the area in the past 24 hours.
Naming NotesThe soil sample was mud, and the oxymoron clear as mud was used.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 24, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage27
Genome length (bp)52987
Character of genome endsCircularly Permuted
GC Content69.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionLa Sierra University
Annotation StatusBeing Annotated (Expected completion by 9/24/2020)
Plaque NotesLytic,1mm diameter.
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload