Gordonia phage Dexdert
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Detailed Information for Phage Dexdert
Discovery Information
Isolation HostGordonia terrae 3612
Found ByKyle Timmer
Year Found2016
Location FoundGrandville, MI USA
Finding InstitutionCalvin University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.896563 N, 85.750597 W Map
Discovery NotesSoil was collected from under a pool deck. The soil was somewhat damp, relatively uniform, and contained some pieces of dead vegetation initially.
Naming NotesThe name is a mix of the words "Deck's Dirt," which is where the phage was isolated from (dirt underneath a pool deck)
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 1, 2017
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage357
Genome length (bp)55006
Character of genome endsCircularly Permuted
GC Content67.5%
Fasta file available?Yes: Download fasta file
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Louisiana at Monroe
Annotation StatusIn GenBank
Plaque NotesPlaques started out very cloudy and hard to spot, but as time went on and more purifications were performed, it became more clear. Normal plaque size tended to be around 1-2 millimeters.
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW314849
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.01*10^9
Date of SEA Lysate Titering Nov 30, 2016
Pitt Freezer Box# 39
Pitt Freezer Box Grid# A2
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload