Mycobacterium phage DmpstrDiver
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Detailed Information for Phage DmpstrDiver
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByElsa Clenny
Year Found2014
Location FoundOxford , OH USA
Finding InstitutionMiami University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates39.502302 N, 84.732637 W Map
Discovery NotesPhage sample collected from the bottom of a dumpster outside of a university residence hall. The sample was moist with a pungent smell and contained many small particles of trash.
Naming NotesI named my phage off of the fact that I went dumpster diving to collect it. I climbed into a mostly empty dumpster outside a residence hall on Miami University's campus and collected the sample from the moist residue on the bottom of the dumpster.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 7, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1194
Genome length (bp)112285
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
Overhang SequenceATCC
GC Content60.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterJ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesPinprick lytic plaques
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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DmpstrDiver_1
(HNH endonuclease)

DmpstrDiver_2

DmpstrDiver_3

DmpstrDiver_4
(HNH endonuclease)

DmpstrDiver_5

DmpstrDiver_6

DmpstrDiver_7

DmpstrDiver_8

DmpstrDiver_9
(terminase large subunit)

DmpstrDiver_10

DmpstrDiver_11
(portal protein)

DmpstrDiver_12
(capsid maturation protease)

DmpstrDiver_13
(major capsid protein)

DmpstrDiver_14
(glycosyltransferase)

DmpstrDiver_15
(serine/threonine kinase)

DmpstrDiver_16
(methyltransferase)

DmpstrDiver_17
(glycosyltransferase)

DmpstrDiver_18
(glycosyltransferase)

DmpstrDiver_19
(glycosyltransferase)

DmpstrDiver_20
(peptidase)

DmpstrDiver_21

DmpstrDiver_22
(glycosyltransferase)

DmpstrDiver_23

DmpstrDiver_24
(head-to-tail adaptor)

DmpstrDiver_25
(head-to-tail stopper)

DmpstrDiver_26

DmpstrDiver_27
(tail terminator)

DmpstrDiver_28

DmpstrDiver_29

DmpstrDiver_30
(major tail protein)

DmpstrDiver_31
(tail assembly chaperone)

DmpstrDiver_32
(tail assembly chaperone)

DmpstrDiver_33
(tape measure protein)

DmpstrDiver_34
(minor tail protein)

DmpstrDiver_35
(minor tail protein)

DmpstrDiver_36
(minor tail protein)

DmpstrDiver_37
(minor tail protein)

DmpstrDiver_38
(minor tail protein)

DmpstrDiver_39
(minor tail protein)

DmpstrDiver_40

DmpstrDiver_41
(helix-turn-helix DNA binding protein)

DmpstrDiver_42

DmpstrDiver_43

DmpstrDiver_44

DmpstrDiver_45

DmpstrDiver_46

DmpstrDiver_47
(HNH endonuclease)

DmpstrDiver_48
(lysin A)

DmpstrDiver_49
(holin)

DmpstrDiver_50
(lysin B)

DmpstrDiver_51
(holin)

DmpstrDiver_52

DmpstrDiver_53
(thioredoxin)

DmpstrDiver_54

DmpstrDiver_55

DmpstrDiver_56

DmpstrDiver_57

DmpstrDiver_58
(Lsr2-like DNA bridging protein)

DmpstrDiver_59

DmpstrDiver_60

DmpstrDiver_61

DmpstrDiver_62

DmpstrDiver_63

DmpstrDiver_64

DmpstrDiver_65

DmpstrDiver_66

DmpstrDiver_67

DmpstrDiver_68

DmpstrDiver_69

DmpstrDiver_70

DmpstrDiver_71

DmpstrDiver_72

DmpstrDiver_73

DmpstrDiver_74

DmpstrDiver_75

DmpstrDiver_76

DmpstrDiver_77

DmpstrDiver_78

DmpstrDiver_79

DmpstrDiver_80

DmpstrDiver_81
(excise)

DmpstrDiver_82
(tyrosine integrase)

DmpstrDiver_83

DmpstrDiver_84

DmpstrDiver_85

DmpstrDiver_86

DmpstrDiver_87

DmpstrDiver_88

DmpstrDiver_89

DmpstrDiver_90

DmpstrDiver_91

DmpstrDiver_92

DmpstrDiver_93

DmpstrDiver_94

DmpstrDiver_95

DmpstrDiver_96

DmpstrDiver_97

DmpstrDiver_98

DmpstrDiver_99
(helix-turn-helix DNA binding protein)

DmpstrDiver_100

DmpstrDiver_101

DmpstrDiver_102
(esterase)

DmpstrDiver_103

DmpstrDiver_104

DmpstrDiver_105

DmpstrDiver_106

DmpstrDiver_107

DmpstrDiver_108

DmpstrDiver_109

DmpstrDiver_110

DmpstrDiver_111

DmpstrDiver_112

DmpstrDiver_113
(HNH endonuclease)

DmpstrDiver_114

DmpstrDiver_115

DmpstrDiver_116

DmpstrDiver_117

DmpstrDiver_118
(RecB-like exonuclease)

DmpstrDiver_119

DmpstrDiver_120

DmpstrDiver_121

DmpstrDiver_122
(DNA methylase)

DmpstrDiver_123
(HNH endonuclease)

DmpstrDiver_124

DmpstrDiver_125

DmpstrDiver_126

DmpstrDiver_127

DmpstrDiver_128
(polynucleotide kinase)

DmpstrDiver_129

DmpstrDiver_130
(endonuclease VII)

DmpstrDiver_131
(WhiB family transcription factor)

DmpstrDiver_132
(helix-turn-helix DNA binding protein)

DmpstrDiver_133

DmpstrDiver_134

DmpstrDiver_135

DmpstrDiver_136

DmpstrDiver_137
(DNA primase/polymerase)

DmpstrDiver_138
(HNH endonuclease)

DmpstrDiver_139

DmpstrDiver_140

DmpstrDiver_141

DmpstrDiver_142

DmpstrDiver_143

DmpstrDiver_144

DmpstrDiver_145
(helix-turn-helix DNA binding protein)

DmpstrDiver_146

DmpstrDiver_147

DmpstrDiver_148

DmpstrDiver_149
(DNA primase/helicase)

DmpstrDiver_150

DmpstrDiver_151

DmpstrDiver_152

DmpstrDiver_153

DmpstrDiver_154
(HNH endonuclease)

DmpstrDiver_155

DmpstrDiver_156

DmpstrDiver_157
(RNA ligase)

DmpstrDiver_158
(ClpP-like protease)

DmpstrDiver_159
(DnaQ-like DNA polymerase III subunit)

DmpstrDiver_160

DmpstrDiver_161

DmpstrDiver_162

DmpstrDiver_163
(PAPS reductase)

DmpstrDiver_164
(PAPS reductase)

DmpstrDiver_165
(nucleotide pyrophosphohydrolase)

DmpstrDiver_166

DmpstrDiver_167

DmpstrDiver_168
(metallophosphoesterase)

DmpstrDiver_169

DmpstrDiver_170

DmpstrDiver_171

DmpstrDiver_172

DmpstrDiver_173

DmpstrDiver_174

DmpstrDiver_175

DmpstrDiver_176
(metallophosphoesterase)

DmpstrDiver_177

DmpstrDiver_178

DmpstrDiver_179

DmpstrDiver_180

DmpstrDiver_181

DmpstrDiver_182

DmpstrDiver_183

DmpstrDiver_185

DmpstrDiver_186

DmpstrDiver_187

DmpstrDiver_188

DmpstrDiver_189

DmpstrDiver_190

DmpstrDiver_191

DmpstrDiver_192

DmpstrDiver_193

DmpstrDiver_194

DmpstrDiver_195

DmpstrDiver_196

DmpstrDiver_197

DmpstrDiver_198
(FtsK-like DNA translocase)

DmpstrDiver_199

DmpstrDiver_200

DmpstrDiver_201

DmpstrDiver_202
(Ku-like dsDNA break-binding protein)

DmpstrDiver_203

DmpstrDiver_204

DmpstrDiver_205

DmpstrDiver_206

DmpstrDiver_207

DmpstrDiver_208

DmpstrDiver_209

DmpstrDiver_210

DmpstrDiver_211

DmpstrDiver_212

DmpstrDiver_213

DmpstrDiver_214

DmpstrDiver_215

DmpstrDiver_216

DmpstrDiver_217

DmpstrDiver_218

DmpstrDiver_219

DmpstrDiver_220

DmpstrDiver_221

DmpstrDiver_222

DmpstrDiver_223

DmpstrDiver_224

DmpstrDiver_225

DmpstrDiver_226

DmpstrDiver_227

DmpstrDiver_228

DmpstrDiver_229

DmpstrDiver_230

DmpstrDiver_231

DmpstrDiver_232

DmpstrDiver_233

DmpstrDiver_234

DmpstrDiver_235

DmpstrDiver_236

DmpstrDiver_237

DmpstrDiver_238

DmpstrDiver_239

DmpstrDiver_240

DmpstrDiver_241

DmpstrDiver_242

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF919504
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 24
Pitt Freezer Box Grid# E1
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload