Gordonia phage Erutan
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Detailed Information for Phage Erutan
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByKatie Lynn Johnson
Year Found2022
Location FoundSocorro, NM United States
Finding InstitutionNew Mexico Institute of Mining and Technology
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates34.067882 N, 106.909707 W Map
Discovery NotesThe collection site for this phage is on the campus of New Mexico Tech by the duck pond. The outside temperature was about 61 degrees Fahrenheit when the soil was collected and it was taken from the ground surface on the bank of the pond. It was extremely moist and dark brown in color. Also it had contained some mossy leaves and twigs in it.
Naming NotesErutan was chosen as the name for this phage for multiple reasons. First, Erutan is nature spelled backwards. Second, one of the meanings of Erutan is persistence. This fits well for the phage because I had to test four soil samples before I was able to obtain a phage. Finally, Erutan is a stage name for a singer who sings folklore songs about nature, which is what I thought of when at the collection site for this phage.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 4, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1359
Genome length (bp)66957
Character of genome endsCircularly Permuted
GC Content58.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDV
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionNew Mexico Institute of Mining and Technology
Annotation StatusBeing Annotated (Expected completion by 5/1/2023)
Plaque NotesThis phage produced medium size plaques that are similar to the size of a dot made by a thick dry erase marker. The plaques are very round in shape and fairly clear with a slight film cover over it.
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
SEA Lysate Titer 3.5 x 10^11 pfu/µl
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload