Gordonia phage HaleyJK
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Detailed Information for Phage HaleyJK
Discovery Information
Isolation HostGordonia terrae 3612
Found ByJacqueline Koo
Year Found2018
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.4438 N, 79.9539 W Map
Discovery NotesThe soil was collected on 08/28/18 outside the Cathedral of Learning (Bigelow Boulevard side) at around 9:55 PM. The soil was right next to the sidewalk and was pretty dry. The weather was slightly humid but mainly clear and cool.
Naming NotesI named my phage Haley after my best friend from home as I love both her and my phage.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 15, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1003
Genome length (bp)46221
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTACCAGGGGGA
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ2
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusBeing Annotated (Expected completion by 5/15/2019)
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives