Gordonia phage JKSyngboy
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Detailed Information for Phage JKSyngboy
Discovery Information
Isolation HostGordonia terrae 3612
Found ByPatrick Keeley
Year Found2019
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.6968 N, 79.6924 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 6, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1583
Genome length (bp)58176
Character of genome endsCircularly Permuted
GC Content68.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
SubclusterDE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesClear plaques, ranging from 2-3 mm in size.
Has been Phamerated?Yes
Gene List

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JKSyngboy_1
(terminase small subunit)

JKSyngboy_2
(terminase large subunit)

JKSyngboy_3

JKSyngboy_4
(DNA methylase)

JKSyngboy_5

JKSyngboy_6

JKSyngboy_7

JKSyngboy_8

JKSyngboy_9
(lipoprotein)

JKSyngboy_10

JKSyngboy_11
(portal protein)

JKSyngboy_12

JKSyngboy_13

JKSyngboy_14
(minor capsid protein)

JKSyngboy_15

JKSyngboy_16
(capsid maturation protease)

JKSyngboy_17

JKSyngboy_18

JKSyngboy_19
(major capsid protein)

JKSyngboy_20

JKSyngboy_21

JKSyngboy_22
(major tail protein)

JKSyngboy_23
(esterase)

JKSyngboy_24
(head-to-tail adaptor)

JKSyngboy_25

JKSyngboy_26

JKSyngboy_27

JKSyngboy_28
(tail assembly chaperone)

JKSyngboy_29

JKSyngboy_30
(tape measure protein)

JKSyngboy_31
(minor tail protein)

JKSyngboy_32
(minor tail protein)

JKSyngboy_33

JKSyngboy_34
(minor tail protein)

JKSyngboy_35

JKSyngboy_36

JKSyngboy_37
(minor tail protein)

JKSyngboy_38

JKSyngboy_39
(lysin A)

JKSyngboy_40
(holin)

JKSyngboy_41

JKSyngboy_42

JKSyngboy_43
(lysin B)

JKSyngboy_44

JKSyngboy_45
(RecE-like exonuclease)

JKSyngboy_46

JKSyngboy_47
(HNH endonuclease)

JKSyngboy_48
(RecT-like ssDNA binding protein)

JKSyngboy_49

JKSyngboy_50

JKSyngboy_51
(helix-turn-helix DNA binding domain protein)

JKSyngboy_52

JKSyngboy_53

JKSyngboy_54

JKSyngboy_55

JKSyngboy_56

JKSyngboy_57

JKSyngboy_58

JKSyngboy_59

JKSyngboy_60

JKSyngboy_61

JKSyngboy_62

JKSyngboy_63

JKSyngboy_64

JKSyngboy_65
(RuvC-like resolvase)

JKSyngboy_66

JKSyngboy_67

JKSyngboy_68

JKSyngboy_69

JKSyngboy_70

JKSyngboy_71

JKSyngboy_72

JKSyngboy_73

JKSyngboy_74

JKSyngboy_75

JKSyngboy_76

JKSyngboy_77

JKSyngboy_78

JKSyngboy_79

JKSyngboy_80

JKSyngboy_81
(helix-turn-helix DNA binding domain protein)

JKSyngboy_82
(DNA methylase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT723937
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2.4 x 10^12 pfu/uL
Pitt Freezer Box# 114
Pitt Freezer Box Grid# E8
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload