Gordonia phage JasperJr
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Detailed Information for Phage JasperJr
Discovery Information
Isolation HostGordonia terrae CAG3
Found ByKylee Kent
Year Found2018
Location FoundLawrence, KS USA
Finding InstitutionUniversity of Kansas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates38.958333 N, 95.241667 W Map
Discovery NotesFrom damp soil full of vegetation about 10 cm below surface on 8/23/18.
Naming NotesNamed after Julia Reeves' dog
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 29, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1797
Genome length (bp)49894
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGCCGGTGA
GC Content67.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Kansas
Annotation StatusIn GenBank
Plaque Notes1 mm clear plaques
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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JasperJr_1
(terminase small subunit)

JasperJr_2
(terminase large subunit)

JasperJr_3
(portal protein)

JasperJr_4
(capsid maturation protease)

JasperJr_5
(scaffolding protein)

JasperJr_6
(major capsid protein)

JasperJr_7

JasperJr_8
(head-to-tail adaptor)

JasperJr_9
(head-to-tail adaptor)

JasperJr_10

JasperJr_11

JasperJr_12

JasperJr_13
(head-to-tail adaptor)

JasperJr_14
(major tail protein)

JasperJr_15
(tail assembly chaperone)

JasperJr_16
(tail assembly chaperone)

JasperJr_17
(tape measure protein)

JasperJr_18
(minor tail protein)

JasperJr_19
(minor tail protein)

JasperJr_20
(lysin A, L-Ala-D-Glu peptidase domain)

JasperJr_21
(lysin A, glycosyl hydrolase domain)

JasperJr_22
(holin)

JasperJr_23
(membrane protein)

JasperJr_24
(membrane protein)

JasperJr_25
(lysin B)

JasperJr_26

JasperJr_27
(minor tail protein)

JasperJr_28
(minor tail protein)

JasperJr_29

JasperJr_30
(minor tail protein)

JasperJr_31

JasperJr_32

JasperJr_33

JasperJr_34

JasperJr_35

JasperJr_36
(helix-turn-helix DNA binding domain protein)

JasperJr_37

JasperJr_38
(tyrosine integrase)

JasperJr_39

JasperJr_40
(immunity repressor)

JasperJr_41
(excise)

JasperJr_42

JasperJr_43

JasperJr_44

JasperJr_45

JasperJr_46

JasperJr_47

JasperJr_48
(helix-turn-helix DNA binding domain protein)

JasperJr_49

JasperJr_50

JasperJr_51

JasperJr_52

JasperJr_53

JasperJr_54
(exonuclease)

JasperJr_55
(exonuclease)

JasperJr_56
(RecT-like ssDNA binding protein)

JasperJr_57

JasperJr_58

JasperJr_59

JasperJr_60

JasperJr_61
(membrane protein)

JasperJr_62

JasperJr_63
(nucleotidyl transferase)

JasperJr_64

JasperJr_65

JasperJr_66

JasperJr_67
(HNH endonuclease)

JasperJr_68

JasperJr_69

JasperJr_70

JasperJr_71

JasperJr_72

JasperJr_73
(RuvC-like resolvase)

JasperJr_74

JasperJr_75

JasperJr_76

JasperJr_77

JasperJr_78
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK967389
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 86
Pitt Freezer Box Grid# G5
Available Files
EM PictureDownload
GenBank File for PhameratorDownload