Gordonia phage Jodelie19
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Detailed Information for Phage Jodelie19
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByHannah Romo Barten
Year Found2019
Location FoundNorth Las Vegas, NV USA
Finding InstitutionCollege of Southern Nevada
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates36.2872 N, 115.177 W Map
Discovery NotesSample was collected in damp soil located near a duck pond. There were sparse patches of grass near the collection site and feathers indicating evidence of animals residing nearby.
Naming NotesMy chosen name came from a combination of relatives and the phage discovery year.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 21, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1814
Genome length (bp)62331
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGCTCT
GC Content51.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDJ
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionCollege of Southern Nevada
Annotation StatusBeing Annotated (Expected completion by 5/1/2020)
Plaque NotesPlaques display a rounded morphology with a slightly cloudy tint approx. 1 mm in diameter.
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
EM PictureDownload