| Detailed Information for Phage Jumbo |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Amanda Weber |
| Year Found | 2015 |
| Location Found | Hudson, WI USA |
| Finding Institution | University of Wisconsin-River Falls |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 44.984444 N, 92.754444 W Map |
| Discovery Notes | From Compost soil. Air temp was 69*F, sunny, no wind, low humidity, semi-moist soil with small pieces of leaves and other debris, 30mm deep. |
| Naming Notes | The plaques were very small, so I named my phage Jumbo ironically. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 17, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1323 |
| Genome length (bp) | 78302 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 370 bp |
| GC Content | 54.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DF |
| Subcluster | DF3 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Small, pinprick sized plaques. Clear appearance. |
| Morphotype | Siphoviridae |
| Number of Genes | 102 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KX557281 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
1.3216x10^8 |
| Date of SEA Lysate Titering |
Oct 19, 2015 |
| Pitt Freezer Box# |
24 |
| Pitt Freezer Box Grid# |
C4 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |
