Mycobacterium phage LittleE
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Detailed Information for Phage LittleE
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found BySue Offner
Year Found2008
Location FoundConcord , MA USA
Finding InstitutionLexington High School
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates42.422170, -71.366909 Map
Discovery NotesFound from a bagful of compost from Brigham Farm, MA
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 11, 2011
Sequencing FacilityPittsburgh Bacteriophage Institute
Genome length (bp)109086
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
GC Content61.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterJ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes229
Number of tRNAs1
Has been Phamerated?Yes
Gene List

Click to View

LittleE_1
(terminase)

LittleE_2

LittleE_3

LittleE_4

LittleE_5

LittleE_6

LittleE_7

LittleE_8

LittleE_9
(terminase)

LittleE_10

LittleE_11
(portal protein)

LittleE_12
(capsid maturation protease)

LittleE_13
(major capsid protein)

LittleE_14
(HNH endonuclease)

LittleE_15
(glycosyltransferase)

LittleE_16
(serine/threonine kinase)

LittleE_17
(methyltransferase)

LittleE_18
(glycosyltransferase)

LittleE_19

LittleE_20

LittleE_21

LittleE_22

LittleE_23
(head-to-tail adaptor)

LittleE_24
(head-to-tail stopper)

LittleE_25

LittleE_26
(tail terminator)

LittleE_27

LittleE_28

LittleE_29
(major tail protein)

LittleE_31
(tail assembly chaperone)

LittleE_30
(tail assembly chaperone)

LittleE_32
(tape measure protein)

LittleE_33

LittleE_34

LittleE_35

LittleE_36
(minor tail protein)

LittleE_37
(minor tail protein)

LittleE_38
(minor tail protein)

LittleE_39
(minor tail protein)

LittleE_40
(minor tail protein)

LittleE_41

LittleE_42

LittleE_43

LittleE_44

LittleE_45

LittleE_46

LittleE_47

LittleE_48

LittleE_49

LittleE_50

LittleE_51
(lysin A)

LittleE_52

LittleE_53
(lysin B)

LittleE_54
(holin)

LittleE_55

LittleE_56
(thioredoxin)

LittleE_57

LittleE_58

LittleE_59
(Lsr2-like DNA bridging protein)

LittleE_60

LittleE_61

LittleE_62

LittleE_63

LittleE_64

LittleE_65

LittleE_66

LittleE_67

LittleE_68

LittleE_69

LittleE_70

LittleE_71

LittleE_72

LittleE_73

LittleE_74

LittleE_75

LittleE_76

LittleE_77

LittleE_78

LittleE_79

LittleE_80

LittleE_81

LittleE_82
(tyrosine integrase)

LittleE_83

LittleE_84
(endonuclease VII)

LittleE_85

LittleE_86

LittleE_87

LittleE_88

LittleE_89

LittleE_90

LittleE_91

LittleE_92

LittleE_93

LittleE_94

LittleE_95

LittleE_96

LittleE_97

LittleE_98

LittleE_99
(esterase)

LittleE_100

LittleE_101

LittleE_102

LittleE_103

LittleE_104

LittleE_105

LittleE_106

LittleE_107

LittleE_108

LittleE_109

LittleE_110

LittleE_111

LittleE_112
(HNH endonuclease)

LittleE_113

LittleE_114

LittleE_115

LittleE_116

LittleE_117
(RecB-like exonuclease)

LittleE_118

LittleE_119

LittleE_120

LittleE_121
(DNA methylase)

LittleE_122
(HNH endonuclease)

LittleE_123

LittleE_124

LittleE_125

LittleE_126

LittleE_127

LittleE_128

LittleE_129
(polynucleotide kinase)

LittleE_130

LittleE_131
(endonuclease VII)

LittleE_132
(WhiB family transcription factor)

LittleE_133

LittleE_134

LittleE_135

LittleE_136

LittleE_137

LittleE_138

LittleE_139

LittleE_140
(DNA primase/polymerase)

LittleE_141

LittleE_142

LittleE_143

LittleE_144

LittleE_145

LittleE_146

LittleE_147

LittleE_148

LittleE_149
(DNA primase/helicase)

LittleE_150
(HNH endonuclease)

LittleE_151
(DNA methylase)

LittleE_152

LittleE_153

LittleE_154

LittleE_155

LittleE_156

LittleE_157

LittleE_158
(RNA ligase)

LittleE_159
(ClpP-like protease)

LittleE_160
(DnaQ-like DNA polymerase III subunit)

LittleE_161

LittleE_162

LittleE_163

LittleE_164

LittleE_165

LittleE_166

LittleE_167

LittleE_168

LittleE_169

LittleE_170

LittleE_171

LittleE_172

LittleE_173

LittleE_174

LittleE_175

LittleE_176

LittleE_177

LittleE_178

LittleE_179

LittleE_180

LittleE_181

LittleE_182

LittleE_183

LittleE_184

LittleE_185

LittleE_186

LittleE_187

LittleE_188

LittleE_189

LittleE_191

LittleE_192

LittleE_193

LittleE_194

LittleE_195

LittleE_196

LittleE_197

LittleE_198
(FtsK-like DNA translocase)

LittleE_199

LittleE_200

LittleE_201

LittleE_202

LittleE_203

LittleE_204
(Ku-like dsDNA break-binding protein)

LittleE_205

LittleE_206

LittleE_207

LittleE_208

LittleE_209

LittleE_210

LittleE_211

LittleE_212

LittleE_213

LittleE_214

LittleE_215

LittleE_216

LittleE_217

LittleE_218

LittleE_219

LittleE_220

LittleE_221

LittleE_222

LittleE_223

LittleE_224

LittleE_225

LittleE_226

LittleE_227

LittleE_228

LittleE_229

LittleE_230

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJF937101
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 2
Pitt Freezer Box Grid# C9
Available Files
Plaque PictureDownload
Virtual Digest PictureDownload
EM PictureDownload