Gordonia phage Madeline
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Detailed Information for Phage Madeline
Discovery Information
Isolation HostGordonia terrae 3612
Found ByMadeline Nisperos
Year Found2018
Location FoundPITTSBURGH, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.444444 N, 79.948889 W Map
Discovery NotesThe sample was collected from a planter that contained a sparse collection of flowers and leafy plants. The soil was dry and crumbled easily.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 3, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage93
Genome length (bp)51668
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCTGGGGA
GC Content66.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ1
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusBeing Annotated (Expected completion by 5/15/2019)
Plaque NotesThe phage I found produced clear and small plaques around 2 mm in diameter.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
SEA Lysate Titer 1.33 x 10^11 pfu/mL
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload