Microbacterium phage Margaery
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Detailed Information for Phage Margaery
Discovery Information
Isolation HostMicrobacterium paraoxydans NWU1
Found ByEmily Kukan
Year Found2018
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.348056 N, 80.020278 W Map
Naming NotesThis phage was named after Margaery Tyrell.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 19, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage571
Genome length (bp)56033
Character of genome endsCircularly Permuted
GC Content69.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEI
Subcluster--
Cluster Life CycleUnknown
Lysogeny NotesThe 10e-4 spot of the phage on a spot titer plate was streaked for evidence of lysogeny after four days of incubation at 37 degrees Celsius. No growth was seen on the streak, indicating this phage does not form a lysogen.
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Margaery_1
(ParB-like nuclease domain protein)

Margaery_2
(oxidoreductase)

Margaery_3

Margaery_4
(terminase)

Margaery_5

Margaery_6

Margaery_7
(ThyX-like thymidylate synthase)

Margaery_8

Margaery_9

Margaery_10

Margaery_12
(portal protein)

Margaery_13

Margaery_14
(MuF-like minor capsid protein)

Margaery_15

Margaery_16

Margaery_17

Margaery_18

Margaery_19

Margaery_20

Margaery_21

Margaery_22
(major capsid hexamer protein)

Margaery_23

Margaery_24

Margaery_25
(major tail protein)

Margaery_26
(head-to-tail adaptor)

Margaery_27

Margaery_28

Margaery_29

Margaery_30

Margaery_31
(tape measure protein)

Margaery_32
(minor tail protein)

Margaery_33
(minor tail protein)

Margaery_34
(minor tail protein)

Margaery_35

Margaery_36

Margaery_37
(endolysin)

Margaery_38

Margaery_39

Margaery_40

Margaery_41

Margaery_42

Margaery_43
(exonuclease)

Margaery_44
(ERF family ssDNA binding protein)

Margaery_45

Margaery_46

Margaery_47

Margaery_48

Margaery_49

Margaery_50

Margaery_51
(HNH endonuclease)

Margaery_52
(helix-turn-helix DNA binding domain protein)

Margaery_53

Margaery_54

Margaery_55

Margaery_56

Margaery_57

Margaery_58

Margaery_59
(ssDNA binding protein)

Margaery_60

Margaery_61

Margaery_62

Margaery_63

Margaery_64
(helix-turn-helix DNA binding domain protein)

Margaery_65

Margaery_66

Margaery_67

Margaery_68

Margaery_69

Margaery_70

Margaery_71

Margaery_72

Margaery_73

Margaery_74

Margaery_75

Margaery_76
(methyltransferase)

Margaery_77

Margaery_78
(RNA polymerase sigma factor)

Margaery_79

Margaery_80

Margaery_81

Margaery_82

Margaery_83

Margaery_84

Margaery_85

Margaery_86

Margaery_87

Margaery_88

Margaery_89

Margaery_90

Margaery_91

Margaery_92

Margaery_93

Margaery_94

Margaery_95

Margaery_96

Margaery_97
(ParB-like nuclease domain protein)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK937606
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 8
Pitt Freezer Box Grid# D11
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload