Gordonia phage Mellie
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Detailed Information for Phage Mellie
Discovery Information
Isolation HostGordonia terrae 3612
Found ByMeghan Fanning
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.444188 N, 79.953992 W Map
Discovery NotesFound in a flower bed situated in front of a fountain at the Cathedral of Learning.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 30, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Genome length (bp)48015
Character of genome endsUnknown
Overhang Length11 bases
Overhang SequenceTCCGCCGGTGA
GC Content67.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Cluster Life CycleTemperate
Lysogeny NotesAble to under the lysogenic cycle after approximately one week of incubation.
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesThey are clear and round plaques, about 2mm in diameter.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Mellie_1
(terminase small subunit)

Mellie_2
(terminase large subunit)

Mellie_3
(portal protein)

Mellie_4
(capsid maturation protease)

Mellie_5
(scaffolding protein)

Mellie_6
(major capsid protein)

Mellie_7

Mellie_8
(head-to-tail adaptor)

Mellie_9
(head-to-tail stopper)

Mellie_10

Mellie_11

Mellie_12
(tail terminator)

Mellie_13
(major tail protein)

Mellie_14
(tail assembly chaperone)

Mellie_15
(tail assembly chaperone)

Mellie_16
(tape measure protein)

Mellie_17
(minor tail protein)

Mellie_18
(minor tail protein)

Mellie_19
(lysin A, L-Ala-D-Glu peptidase domain)

Mellie_20
(lysin A, glycosyl hydrolase domain)

Mellie_21
(holin)

Mellie_22
(membrane protein)

Mellie_23
(membrane protein)

Mellie_24
(lysin B)

Mellie_25

Mellie_26
(minor tail protein)

Mellie_27
(minor tail protein)

Mellie_28

Mellie_29

Mellie_30
(hydrolase)

Mellie_31
(esterase)

Mellie_32

Mellie_33

Mellie_34

Mellie_35
(helix-turn-helix DNA binding domain protein)

Mellie_36

Mellie_37
(serine integrase)

Mellie_38
(helix-turn-helix DNA binding domain protein)

Mellie_39
(metalloprotease)

Mellie_40
(immunity repressor)

Mellie_41
(helix-turn-helix DNA binding domain protein)

Mellie_42

Mellie_43
(antirepressor)

Mellie_44

Mellie_45

Mellie_46

Mellie_47

Mellie_48

Mellie_49
(helix-turn-helix DNA binding domain protein)

Mellie_50

Mellie_51

Mellie_52

Mellie_53

Mellie_54

Mellie_55
(DNA polymerase III subunit)

Mellie_56
(exonuclease)

Mellie_57
(HNH endonuclease)

Mellie_58
(RecT-like ssDNA binding protein)

Mellie_59

Mellie_60

Mellie_61

Mellie_62
(membrane protein)

Mellie_63

Mellie_64

Mellie_65

Mellie_66

Mellie_67
(DNA binding protein)

Mellie_68

Mellie_69

Mellie_70
(membrane protein)

Mellie_71

Mellie_72
(RuvC-like resolvase)

Mellie_73

Mellie_74
(MerR-like helix-turn-helix DNA binding domain protein)

Mellie_75

Mellie_76
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK919470
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 57
Pitt Freezer Box Grid# G2
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload