Mycobacterium phage MrMiyagi
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage MrMiyagi
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByWarren Richardson, Jarred Woodruff, Robert Mills
Year Found2019
Location FoundLongview, TX USA
Finding InstitutionLeTourneau University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates32.4634 N, 94.7265 W Map
Discovery NotesWe retrieved this sample in a bush not far from the pond where other samples were taken. This area seemed to be fairly dense and rich, so hopefully we have some luck with it.
Naming NotesWe decided to name this phage MrMiyagi because it was the name of one of our lab member's pet dog.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 6, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1699
Genome length (bp)70048
Character of genome endsCircularly Permuted
GC Content48.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionLeTourneau University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

MrMiyagi_1
(terminase large subunit)

MrMiyagi_2

MrMiyagi_3
(portal protein)

MrMiyagi_4

MrMiyagi_5

MrMiyagi_6

MrMiyagi_7
(capsid maturation protease)

MrMiyagi_8
(scaffolding protein)

MrMiyagi_9
(minor capsid protein)

MrMiyagi_10
(major capsid protein)

MrMiyagi_11

MrMiyagi_12

MrMiyagi_13

MrMiyagi_14

MrMiyagi_15
(tail terminator)

MrMiyagi_16

MrMiyagi_17

MrMiyagi_18
(major tail protein)

MrMiyagi_19
(tail assembly chaperone)

MrMiyagi_20
(tail assembly chaperone)

MrMiyagi_21
(tape measure protein)

MrMiyagi_22
(minor tail protein)

MrMiyagi_23
(minor tail protein)

MrMiyagi_24
(minor tail protein)

MrMiyagi_25
(minor tail protein)

MrMiyagi_26

MrMiyagi_27

MrMiyagi_28

MrMiyagi_29
(lysin A)

MrMiyagi_30
(holin)

MrMiyagi_31

MrMiyagi_32

MrMiyagi_33

MrMiyagi_34
(lysin B)

MrMiyagi_35

MrMiyagi_36

MrMiyagi_37

MrMiyagi_38

MrMiyagi_39

MrMiyagi_40

MrMiyagi_41

MrMiyagi_42

MrMiyagi_43

MrMiyagi_44

MrMiyagi_45

MrMiyagi_46

MrMiyagi_47

MrMiyagi_48

MrMiyagi_49

MrMiyagi_50

MrMiyagi_51

MrMiyagi_52

MrMiyagi_53

MrMiyagi_54

MrMiyagi_55

MrMiyagi_56

MrMiyagi_57

MrMiyagi_58

MrMiyagi_59

MrMiyagi_60

MrMiyagi_61

MrMiyagi_62

MrMiyagi_63

MrMiyagi_64

MrMiyagi_65

MrMiyagi_66

MrMiyagi_67
(helix-turn-helix DNA-binding domain protein)

MrMiyagi_69

MrMiyagi_70

MrMiyagi_71

MrMiyagi_72

MrMiyagi_73
(DNA helicase)

MrMiyagi_74

MrMiyagi_75

MrMiyagi_76
(RecB-like exonuclease/helicase)

MrMiyagi_77
(AAA-ATPase)

MrMiyagi_78

MrMiyagi_79

MrMiyagi_80

MrMiyagi_81
(MazG-like nucleotide pyrophosphohydrolase)

MrMiyagi_82

MrMiyagi_83
(DnaE-like DNA polymerase III)

MrMiyagi_84
(DnaE-like DNA polymerase III)

MrMiyagi_85

MrMiyagi_86

MrMiyagi_87

MrMiyagi_88

MrMiyagi_89

MrMiyagi_90
(RuvC-like resolvase)

MrMiyagi_91

MrMiyagi_92

MrMiyagi_93

MrMiyagi_94

MrMiyagi_95

MrMiyagi_96

MrMiyagi_97

MrMiyagi_98

MrMiyagi_99
(DNA primase/polymerase)

MrMiyagi_100

MrMiyagi_101

MrMiyagi_102

MrMiyagi_103

MrMiyagi_104

MrMiyagi_105

MrMiyagi_106

MrMiyagi_107

MrMiyagi_108

MrMiyagi_109

MrMiyagi_110

MrMiyagi_111

MrMiyagi_112

MrMiyagi_113

MrMiyagi_114

MrMiyagi_115

MrMiyagi_116

MrMiyagi_117

MrMiyagi_118

MrMiyagi_119

MrMiyagi_120

MrMiyagi_121

MrMiyagi_122

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT776806
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 101
Pitt Freezer Box Grid# F6
Available Files
GenBank File for PhameratorDownload