Gordonia phage Neobush
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Detailed Information for Phage Neobush
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAakriti Neopaney (Adopted by Madeline Bush)
Year Found2019
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.340556 N, 79.970278 W Map
Discovery NotesMy soil sample was collected from the flowerbed in the backyard of my house. My house is located in Baldwin, PA. I collected my soil sample on Monday, September 23rd 2019 at 7:48AM. The soil was slightly moist and covered in dead roots. The soil was collected directly from the surface. It was gloomy outside with an ambient temperature of 67º F. There were a few plants behind the area in which I collected the soil from.
Naming NotesPhage Neobush was isolated and discovered by Neopaney and adopted by Bush. The parents of the phage decided to combine their last names for their special child that was found on the sixth isolation trial.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 24, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1775
Genome length (bp)50906
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCTGGGGA
GC Content66.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionWashington State University
Annotation StatusAwaiting_QC
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 114
Pitt Freezer Box Grid# H2
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload