Microbacterium phage Nicole72
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Detailed Information for Phage Nicole72
Discovery Information
Isolation HostMicrobacterium paraoxydans NWU1
Found ByJulia Kovalski
Year Found2019
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.443649 N, 79.954516 W Map
Discovery NotesSoil sample was found in an empty flower bed by the sidewalk outside of the William Pitt Union
Naming NotesNicole id my mom's name and '72 was the year she was born
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 11, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage84
Genome length (bp)55431
Character of genome endsCircularly Permuted
GC Content69.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionCollege of Charleston
Annotation StatusIn GenBank
Plaque Notesvery small, circular, clear plaques
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Nicole72_1
(ParB-like nuclease domain protein)

Nicole72_2

Nicole72_3

Nicole72_4

Nicole72_5
(QueC-like Pre Qo pathway protein)

Nicole72_6

Nicole72_7

Nicole72_8
(QueD-like Pre Qo pathway protein)

Nicole72_9
(QueE-like Pre Qo pathway protein)

Nicole72_10
(FolE-like GTP cyclohydrolase I)

Nicole72_11
(terminase large subunit)

Nicole72_12

Nicole72_13

Nicole72_14
(portal protein)

Nicole72_15

Nicole72_16

Nicole72_17

Nicole72_18

Nicole72_19

Nicole72_20
(capsid maturation protease)

Nicole72_21

Nicole72_22
(major capsid hexamer protein)

Nicole72_23

Nicole72_24

Nicole72_25
(major tail protein)

Nicole72_26
(head-to-tail adaptor)

Nicole72_27

Nicole72_28

Nicole72_29
(tail assembly chaperone)

Nicole72_30

Nicole72_31
(tape measure protein)

Nicole72_32
(minor tail protein)

Nicole72_33
(minor tail protein)

Nicole72_34
(minor tail protein)

Nicole72_35
(minor tail protein)

Nicole72_36

Nicole72_37

Nicole72_38
(lysin A)

Nicole72_39

Nicole72_40

Nicole72_41

Nicole72_42

Nicole72_43

Nicole72_44

Nicole72_45
(rusA-like resolvase)

Nicole72_46
(RecE-like exonuclease)

Nicole72_47
(ERF family DNA pairing protein)

Nicole72_48

Nicole72_49

Nicole72_50

Nicole72_51

Nicole72_52

Nicole72_53
(HNH endonuclease)

Nicole72_54
(helix-turn-helix DNA binding domain protein)

Nicole72_55

Nicole72_56

Nicole72_57

Nicole72_58

Nicole72_59

Nicole72_60

Nicole72_61

Nicole72_62
(SSB protein)

Nicole72_63

Nicole72_64

Nicole72_65

Nicole72_66

Nicole72_67

Nicole72_68

Nicole72_69

Nicole72_70
(deoxycytidylate deaminase)

Nicole72_71

Nicole72_72

Nicole72_73

Nicole72_74

Nicole72_75

Nicole72_76

Nicole72_77

Nicole72_78

Nicole72_79

Nicole72_80

Nicole72_81
(peptidase)

Nicole72_82

Nicole72_83

Nicole72_84

Nicole72_85

Nicole72_86

Nicole72_87
(DNA binding protein)

Nicole72_88

Nicole72_89

Nicole72_90

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR159674
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 96
Pitt Freezer Box Grid# G2
Available Files
EM PictureDownload
GenBank File for PhameratorDownload