Gordonia phage Paries
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Detailed Information for Phage Paries
Discovery Information
Isolation HostGordonia terrae NRRL B-16283
Found ByRachel Perera
Year Found2019
Location FoundSaint Louis, MO United States
Finding InstitutionSt. Louis Community College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates38.5676 N, 90.4225 W Map
Discovery NotesDiscovered by a tree stump with growing fungi which is located by a small waterfall. There was a lot of organic matter surrounding the area.
Naming NotesThe 'P' is to represent the discoverer, while 'aries' is the zodiac sign of said discoverer.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 14, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage813
Genome length (bp)60127
Character of genome endsCircularly Permuted
GC Content67.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
SubclusterDE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionSt. Louis Community College
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Paries_1
(terminase, small subunit)

Paries_2
(terminase, large subunit)

Paries_3

Paries_4

Paries_5

Paries_6

Paries_7

Paries_8

Paries_9

Paries_10
(DNA methylase)

Paries_11
(helix-turn-helix DNA binding domain)

Paries_12

Paries_13
(portal protein)

Paries_14

Paries_15
(MuF-like minor capsid protein)

Paries_16

Paries_17
(capsid maturation protease)

Paries_18

Paries_19
(HNH endonuclease)

Paries_20

Paries_21
(major capsid protein)

Paries_22

Paries_23

Paries_24
(major tail protein)

Paries_25

Paries_26

Paries_27

Paries_28

Paries_29
(head-to-tail adaptor)

Paries_30

Paries_31

Paries_32

Paries_33
(tail assembly chaperone)

Paries_34

Paries_35
(tape measure protein)

Paries_36
(minor tail protein)

Paries_37
(minor tail protein)

Paries_38
(HNH endonuclease)

Paries_39

Paries_40
(minor tail protein)

Paries_41

Paries_42

Paries_43
(HNH endonuclease)

Paries_44
(lysin A)

Paries_45
(holin)

Paries_46

Paries_47

Paries_48
(lysin B)

Paries_49

Paries_50

Paries_51
(Cas4 family exonuclease)

Paries_52

Paries_53

Paries_54

Paries_55
(RecT-like ssDNA binding protein)

Paries_56

Paries_57

Paries_58
(helix-turn-helix DNA binding domain)

Paries_59
(helix-turn-helix DNA binding domain)

Paries_60

Paries_61

Paries_62

Paries_63

Paries_64

Paries_65

Paries_66

Paries_67

Paries_68

Paries_69

Paries_70
(RuvC-like resolvase)

Paries_71

Paries_72

Paries_73

Paries_74

Paries_75

Paries_76
(methyltransferase)

Paries_77

Paries_78

Paries_79

Paries_80

Paries_81
(ssDNA binding protein, ERF family)

Paries_82

Paries_83

Paries_84

Paries_85

Paries_86

Paries_87

Paries_88
(helix-turn-helix DNA binding domain)

Paries_89
(methyltransferase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT639640
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload