Gordonia phage Phinally
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Detailed Information for Phage Phinally
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAudrey Jonas
Year Found2015
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.94085 N, 79.621814 W Map
Discovery NotesSoil was collected from a flowerbed exposed to the high level of rainfall that has been occurring over the past two days. Weather was rainy and slightly humid at time of collection. Soil was near flowers and shrubs, not beneath any plant or other barrier.
Naming NotesSeven soil samples in, I was beginning to doubt that a phage would be found. Thankfully I phinally phound a phage.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 13, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage545
Genome length (bp)59265
Character of genome endsCircularly Permuted
GC Content68.4%
Fasta file available?Yes: Download fasta file
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesPlaques are round and clear; approximately 0.5 mm in diameter
Number of Genes87
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKU963253
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 2
Pitt Freezer Box Grid# H2
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload