Microbacterium phage Roman
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Detailed Information for Phage Roman
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found ByLouise Goodman, Ashley Neeley
Year Found2018
Location FoundNewburgh, NY USA
Finding InstitutionMount Saint Mary College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates41.3051 N, 74.0023 W Map
Discovery NotesDirect Isolation
Naming NotesWe are fascinated by the Roman Empire.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 9, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1345
Genome length (bp)64259
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length3172 bp
GC Content62.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterED
SubclusterED1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionMount Saint Mary College
Annotation StatusIn GenBank
Plaque NotesLarge and clear plaques
Has been Phamerated?Yes
Gene List

Click to View

Roman_1

Roman_2

Roman_3

Roman_4

Roman_5

Roman_6

Roman_7
(membrane protein)

Roman_8

Roman_9

Roman_10

Roman_11

Roman_12

Roman_13

Roman_14

Roman_15

Roman_16
(membrane protein)

Roman_17

Roman_18

Roman_19

Roman_20
(membrane protein)

Roman_21

Roman_22

Roman_23

Roman_24

Roman_25

Roman_26

Roman_27

Roman_28

Roman_29

Roman_30
(NrdH-like glutaredoxin)

Roman_31
(exonuclease)

Roman_32

Roman_33
(terminase)

Roman_34
(portal protein)

Roman_35
(endonuclease VII)

Roman_36
(capsid maturation protease)

Roman_37

Roman_38
(major capsid protein)

Roman_39

Roman_40

Roman_41

Roman_42
(hydrolase)

Roman_43
(head-to-tail stopper)

Roman_44

Roman_45

Roman_46

Roman_47

Roman_48

Roman_49
(tail assembly chaperone)

Roman_50
(tail assembly chaperone)

Roman_51
(tape measure protein)

Roman_52

Roman_53
(minor tail protein)

Roman_54

Roman_55

Roman_56

Roman_57
(lysin A)

Roman_58
(membrane protein)

Roman_59
(membrane protein)

Roman_60
(membrane protein)

Roman_61
(holliday junction resolvase)

Roman_62

Roman_63

Roman_64

Roman_65

Roman_66

Roman_67
(HNH endonuclease)

Roman_68
(DNA primase/polymerase)

Roman_69
(membrane protein)

Roman_70

Roman_71

Roman_72
(exonuclease)

Roman_73
(ERF family ssDNA binding protein)

Roman_74
(DnaQ-like exonuclease)

Roman_75

Roman_76

Roman_77

Roman_78

Roman_79
(RNA ligase)

Roman_80
(polynucleotide kinase)

Roman_81
(DNA helicase)

Roman_82

Roman_83

Roman_84

Roman_85

Roman_86

Roman_87

Roman_88

Roman_89

Roman_90

Roman_91
(membrane protein)

Roman_92

Roman_93

Roman_94

Roman_95

Roman_96

Roman_97

Roman_98
(helix-turn-helix DNA binding domain protein)

Roman_99

Roman_100

Roman_101

Roman_102

Roman_103

Roman_104

Roman_105

Roman_106

Roman_107

Roman_108

Roman_109

Roman_110

Roman_111

Roman_112

Roman_113

Roman_114

Roman_115

Roman_116

Roman_117

Roman_118

Roman_119

Roman_120

Roman_121

Roman_122

Roman_123
(membrane protein)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN096374
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 80
Pitt Freezer Box Grid# E8
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload